RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 HPXP02790 462 aa11.54□□□□□ -0.56
RNF43-201ENST00000407977 GLULP15104 373 aa11.54□□□□□ -0.56
RNF43-201ENST00000407977 DLK1P80370 383 aa11.54□□□□□ -0.56
RNF43-201ENST00000407977 TMEM65Q6PI78 240 aa11.54□□□□□ -0.56
RNF43-201ENST00000407977 PARM1Q6UWI2 310 aa11.54□□□□□ -0.56
RNF43-201ENST00000407977 OR10AD1Q8NGE0 317 aa11.54□□□□□ -0.56
RNF43-201ENST00000407977 OR4C3Q8NH37 302 aa11.54□□□□□ -0.56
RNF43-201ENST00000407977 CCL4L1Q8NHW4 92 aa11.54□□□□□ -0.56
RNF43-201ENST00000407977 SLC25A22Q9H936 323 aa11.54□□□□□ -0.56
RNF43-201ENST00000407977 PRICKLE4Q2TBC4 344 aa11.54□□□□□ -0.56
RNF43-201ENST00000407977 C9orf152Q5JTZ5 239 aa11.54□□□□□ -0.56
RNF43-201ENST00000407977 RGS7BPQ6MZT1 257 aaPredicted RBP11.54□□□□□ -0.56
RNF43-201ENST00000407977 OR5D13Q8NGL4 314 aa11.54□□□□□ -0.56
RNF43-201ENST00000407977 C8orf44Q96CB5 159 aa11.54□□□□□ -0.56
RNF43-201ENST00000407977 MRM2Q9UI43 246 aaKnown RBP11.54□□□□□ -0.56
RNF43-201ENST00000407977 A6NDN8 102 aa11.53□□□□□ -0.56
RNF43-201ENST00000407977 SLC22A20A6NK97 555 aa11.53□□□□□ -0.56
RNF43-201ENST00000407977 OR5B21A6NL26 309 aa11.53□□□□□ -0.56
RNF43-201ENST00000407977 PRRG2O14669 202 aa11.53□□□□□ -0.56
RNF43-201ENST00000407977 SYNGR2O43760 224 aa11.53□□□□□ -0.56
RNF43-201ENST00000407977 ADAP1O75689 374 aa11.53□□□□□ -0.56
RNF43-201ENST00000407977 OR2J3O76001 311 aa11.53□□□□□ -0.56
RNF43-201ENST00000407977 PGA4P0DJD7 388 aa11.53□□□□□ -0.56
RNF43-201ENST00000407977 PGA5P0DJD9 388 aa11.53□□□□□ -0.56
RNF43-201ENST00000407977 MOB3AQ96BX8 217 aa11.53□□□□□ -0.56
RNF43-201ENST00000407977 ZPBPQ9BS86 351 aa11.53□□□□□ -0.56
RNF43-201ENST00000407977 ATP23Q9Y6H3 246 aa11.53□□□□□ -0.56
RNF43-201ENST00000407977 ERVS71-1P61550 626 aa11.53□□□□□ -0.56
RNF43-201ENST00000407977 ZNF79Q15937 498 aa11.53□□□□□ -0.56
RNF43-201ENST00000407977 ADTRPQ96IZ2 230 aa11.53□□□□□ -0.56
RNF43-201ENST00000407977 ALKBH3Q96Q83 286 aaPredicted RBP11.53□□□□□ -0.56
RNF43-201ENST00000407977 PECRQ9BY49 303 aa11.53□□□□□ -0.56
RNF43-201ENST00000407977 IGHV3-15A0A0B4J1V0 119 aa11.53□□□□□ -0.56
RNF43-201ENST00000407977 PDE6DO43924 150 aa11.53□□□□□ -0.56
RNF43-201ENST00000407977 TNFRSF1AP19438 455 aa11.53□□□□□ -0.56
RNF43-201ENST00000407977 PPP2CBP62714 309 aa11.53□□□□□ -0.56
RNF43-201ENST00000407977 PPP2CAP67775 309 aa11.53□□□□□ -0.56
RNF43-201ENST00000407977 DUSP2Q05923 314 aa11.53□□□□□ -0.56
RNF43-201ENST00000407977 FAM209AQ5JX71 171 aa11.53□□□□□ -0.56
RNF43-201ENST00000407977 TMEM215Q68D42 235 aa11.53□□□□□ -0.56
RNF43-201ENST00000407977 PTP4A1Q93096 173 aa11.53□□□□□ -0.56
RNF43-201ENST00000407977 MRGPRX1Q96LB2 322 aa11.53□□□□□ -0.56
RNF43-201ENST00000407977 NEU3Q9UQ49 428 aa11.53□□□□□ -0.56
RNF43-201ENST00000407977 LOXHD1Q8IVV2 1947 aa11.53□□□□□ -0.56
RNF43-201ENST00000407977 LAMA4Q16363 1823 aa11.53□□□□□ -0.56
RNF43-201ENST00000407977 ANKRD36CQ5JPF3 1778 aa11.53□□□□□ -0.56
RNF43-201ENST00000407977 M0R2Z0 102 aa11.53□□□□□ -0.56
RNF43-201ENST00000407977 FOXO1Q12778 655 aa11.53□□□□□ -0.56
RNF43-201ENST00000407977 ZNF383Q8NA42 475 aa11.53□□□□□ -0.56
RNF43-201ENST00000407977 DPF1Q92782 380 aa11.53□□□□□ -0.56
RNF43-201ENST00000407977 OR2A5Q96R48 311 aa11.53□□□□□ -0.56
RNF43-201ENST00000407977 C1QTNF6Q9BXI9 259 aa11.53□□□□□ -0.56
RNF43-201ENST00000407977 SLC7A10Q9NS82 523 aa11.53□□□□□ -0.56
RNF43-201ENST00000407977 OR1A1Q9P1Q5 309 aa11.53□□□□□ -0.56
RNF43-201ENST00000407977 A0A1W2PN81 502 aa11.52□□□□□ -0.56
RNF43-201ENST00000407977 CDC42EP2O14613 210 aa11.52□□□□□ -0.56
RNF43-201ENST00000407977 SEMA7AO75326 666 aa11.52□□□□□ -0.56
RNF43-201ENST00000407977 BMI1P35226 326 aa11.52□□□□□ -0.56
RNF43-201ENST00000407977 OR3A4PP47883 348 aa11.52□□□□□ -0.56
RNF43-201ENST00000407977 ISOC2Q96AB3 205 aa11.52□□□□□ -0.56
RNF43-201ENST00000407977 PPM1DO15297 605 aa11.52□□□□□ -0.56
RNF43-201ENST00000407977 PPOXP50336 477 aa11.52□□□□□ -0.56
RNF43-201ENST00000407977 DYNLT3P51808 116 aa11.52□□□□□ -0.56
RNF43-201ENST00000407977 UBE2V2Q15819 145 aa11.52□□□□□ -0.56
RNF43-201ENST00000407977 SPNS2Q8IVW8 549 aa11.52□□□□□ -0.56
RNF43-201ENST00000407977 SNX22Q96L94 193 aa11.52□□□□□ -0.56
RNF43-201ENST00000407977 DEFB127Q9H1M4 99 aa11.52□□□□□ -0.56
RNF43-201ENST00000407977 TECRQ9NZ01 308 aaKnown RBP11.52□□□□□ -0.56
RNF43-201ENST00000407977 MYO5AQ9Y4I1 1855 aaKnown RBP11.52□□□□□ -0.57
RNF43-201ENST00000407977 DDX60Q8IY21 1712 aaKnown RBP11.52□□□□□ -0.57
RNF43-201ENST00000407977 K7ERU9 68 aa11.52□□□□□ -0.57
RNF43-201ENST00000407977 RER1O15258 196 aa11.52□□□□□ -0.57
RNF43-201ENST00000407977 CD1AP06126 327 aa11.52□□□□□ -0.57
RNF43-201ENST00000407977 ZNF343Q6P1L6 599 aa11.52□□□□□ -0.57
RNF43-201ENST00000407977 ANKRD33Q7Z3H0 272 aa11.52□□□□□ -0.57
RNF43-201ENST00000407977 ESRP2Q9H6T0 727 aaKnown RBP11.52□□□□□ -0.57
RNF43-201ENST00000407977 NWD2Q9ULI1 1742 aa11.52□□□□□ -0.57
RNF43-201ENST00000407977 CACNA1CQ13936 2221 aa11.52□□□□□ -0.57
RNF43-201ENST00000407977 M0QZ24 198 aa11.52□□□□□ -0.57
RNF43-201ENST00000407977 ZNF25P17030 456 aaPredicted RBP11.52□□□□□ -0.57
RNF43-201ENST00000407977 POLR2GP62487 172 aaKnown RBP eCLIP11.52□□□□□ -0.57
RNF43-201ENST00000407977 ZNF552Q9H707 407 aaPredicted RBP11.52□□□□□ -0.57
RNF43-201ENST00000407977 ZMIZ1Q9ULJ6 1067 aa11.52□□□□□ -0.57
RNF43-201ENST00000407977 TNFSF18Q9UNG2 199 aa11.52□□□□□ -0.57
RNF43-201ENST00000407977 STARD10Q9Y365 291 aa11.52□□□□□ -0.57
RNF43-201ENST00000407977 RGPD2P0DJD1 1756 aa11.52□□□□□ -0.57
RNF43-201ENST00000407977 H3BQ15 152 aa11.52□□□□□ -0.57
RNF43-201ENST00000407977 PLPP3O14495 311 aa11.52□□□□□ -0.57
RNF43-201ENST00000407977 CD99P14209 185 aa11.52□□□□□ -0.57
RNF43-201ENST00000407977 FMODQ06828 376 aa11.52□□□□□ -0.57
RNF43-201ENST00000407977 RNPS1Q15287 305 aaKnown RBP11.52□□□□□ -0.57
RNF43-201ENST00000407977 HIST3H3Q16695 136 aa11.52□□□□□ -0.57
RNF43-201ENST00000407977 TCTN1Q2MV58 587 aa11.52□□□□□ -0.57
RNF43-201ENST00000407977 SMUG1Q53HV7 270 aa11.52□□□□□ -0.57
RNF43-201ENST00000407977 KHDC3LQ587J8 217 aa11.52□□□□□ -0.57
RNF43-201ENST00000407977 CARFQ8N187 725 aa11.52□□□□□ -0.57
RNF43-201ENST00000407977 PTX4Q96A99 478 aa11.52□□□□□ -0.57
RNF43-201ENST00000407977 RAB33BQ9H082 229 aa11.52□□□□□ -0.57
RNF43-201ENST00000407977 OR2T8A6NH00 312 aa11.51□□□□□ -0.57
RNF43-201ENST00000407977 C11orf94C9JXX5 98 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms