RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 CNN3Q15417 329 aaKnown RBP12.49□□□□□ -0.41
TPM1-207ENST00000403994 SLC25A30Q5SVS4 291 aa12.49□□□□□ -0.41
TPM1-207ENST00000403994 ZFP1Q6P2D0 407 aa12.49□□□□□ -0.41
TPM1-207ENST00000403994 TCF23Q7RTU1 214 aa12.49□□□□□ -0.41
TPM1-207ENST00000403994 OR2G2Q8NGZ5 317 aa12.49□□□□□ -0.41
TPM1-207ENST00000403994 TRUB1Q8WWH5 349 aaKnown RBP12.49□□□□□ -0.41
TPM1-207ENST00000403994 RNFT2Q96EX2 444 aa12.49□□□□□ -0.41
TPM1-207ENST00000403994 ADAT3Q96EY9 351 aaPredicted RBP12.49□□□□□ -0.41
TPM1-207ENST00000403994 BORCS8Q96FH0 119 aa12.49□□□□□ -0.41
TPM1-207ENST00000403994 SSX3Q99909 188 aa12.49□□□□□ -0.41
TPM1-207ENST00000403994 PPA2Q9H2U2 334 aa12.49□□□□□ -0.41
TPM1-207ENST00000403994 HEXA-AS1Q9H8Q6 139 aa12.49□□□□□ -0.41
TPM1-207ENST00000403994 IGKV1-9A0A0C4DH69 117 aa12.48□□□□□ -0.41
TPM1-207ENST00000403994 hCG_1809904A0A1W2PP81 198 aa12.48□□□□□ -0.41
TPM1-207ENST00000403994 A0A1W2PPE2 198 aa12.48□□□□□ -0.41
TPM1-207ENST00000403994 A0A1W2PR64 198 aa12.48□□□□□ -0.41
TPM1-207ENST00000403994 A0A1W2PRV1 198 aa12.48□□□□□ -0.41
TPM1-207ENST00000403994 MEX3AA1L020 520 aaKnown RBP12.48□□□□□ -0.41
TPM1-207ENST00000403994 SLC16A6O15403 523 aa12.48□□□□□ -0.41
TPM1-207ENST00000403994 INMTO95050 263 aa12.48□□□□□ -0.41
TPM1-207ENST00000403994 NANOS3P60323 173 aaKnown RBP12.48□□□□□ -0.41
TPM1-207ENST00000403994 AANATQ16613 207 aa12.48□□□□□ -0.41
TPM1-207ENST00000403994 OCLNQ16625 522 aa12.48□□□□□ -0.41
TPM1-207ENST00000403994 ZIK1Q3SY52 487 aaPredicted RBP12.48□□□□□ -0.41
TPM1-207ENST00000403994 ASPHD2Q6ICH7 369 aa12.48□□□□□ -0.41
TPM1-207ENST00000403994 Q8IYB0 196 aa12.48□□□□□ -0.41
TPM1-207ENST00000403994 OR8H2Q8N162 312 aa12.48□□□□□ -0.41
TPM1-207ENST00000403994 CBR4Q8N4T8 237 aa12.48□□□□□ -0.41
TPM1-207ENST00000403994 EMG1Q92979 244 aaKnown RBP12.48□□□□□ -0.41
TPM1-207ENST00000403994 MBOAT4Q96T53 435 aa12.48□□□□□ -0.41
TPM1-207ENST00000403994 TCF7L1Q9HCS4 588 aa12.48□□□□□ -0.41
TPM1-207ENST00000403994 RBFOX1Q9NWB1 397 aaKnown RBP12.48□□□□□ -0.41
TPM1-207ENST00000403994 FRRS1LQ9P0K9 344 aa12.48□□□□□ -0.41
TPM1-207ENST00000403994 TET2Q6N021 2002 aaPredicted RBP12.48□□□□□ -0.41
TPM1-207ENST00000403994 TRBV2A0A0J9YWF9 115 aa12.47□□□□□ -0.41
TPM1-207ENST00000403994 DAPL1A0PJW8 107 aa12.47□□□□□ -0.41
TPM1-207ENST00000403994 TMEM82A0PJX8 343 aa12.47□□□□□ -0.41
TPM1-207ENST00000403994 C17orf98A8MV24 154 aa12.47□□□□□ -0.41
TPM1-207ENST00000403994 ODF3BA8MYP8 253 aa12.47□□□□□ -0.41
TPM1-207ENST00000403994 SERPINA3P01011 423 aa12.47□□□□□ -0.41
TPM1-207ENST00000403994 RBP4P02753 201 aa12.47□□□□□ -0.41
TPM1-207ENST00000403994 CHRM2P08172 466 aa12.47□□□□□ -0.41
TPM1-207ENST00000403994 ZNF20P17024 532 aa12.47□□□□□ -0.41
TPM1-207ENST00000403994 GABRA5P31644 462 aa12.47□□□□□ -0.41
TPM1-207ENST00000403994 POU3F4P49335 361 aa12.47□□□□□ -0.41
TPM1-207ENST00000403994 RBP2P50120 134 aa12.47□□□□□ -0.41
TPM1-207ENST00000403994 EDDM3BP56851 147 aa12.47□□□□□ -0.41
TPM1-207ENST00000403994 OR12D2P58182 307 aa12.47□□□□□ -0.41
TPM1-207ENST00000403994 ZNF91Q05481 1191 aa12.47□□□□□ -0.41
TPM1-207ENST00000403994 LY6EQ16553 131 aa12.47□□□□□ -0.41
TPM1-207ENST00000403994 TMEM244Q5VVB8 128 aa12.47□□□□□ -0.41
TPM1-207ENST00000403994 MEDAGQ5VYS4 303 aa12.47□□□□□ -0.41
TPM1-207ENST00000403994 FDX2Q6P4F2 183 aa12.47□□□□□ -0.41
TPM1-207ENST00000403994 CRIP3Q6Q6R5 217 aa12.47□□□□□ -0.41
TPM1-207ENST00000403994 UTS2BQ765I0 119 aa12.47□□□□□ -0.41
TPM1-207ENST00000403994 GDPD3Q7L5L3 318 aa12.47□□□□□ -0.41
TPM1-207ENST00000403994 DNAAF1Q8NEP3 725 aa12.47□□□□□ -0.41
TPM1-207ENST00000403994 OR51A4Q8NGJ6 313 aa12.47□□□□□ -0.41
TPM1-207ENST00000403994 PPP1R35Q8TAP8 253 aa12.47□□□□□ -0.41
TPM1-207ENST00000403994 MEGF9Q9H1U4 602 aa12.47□□□□□ -0.41
TPM1-207ENST00000403994 MMP27Q9H306 513 aa12.47□□□□□ -0.41
TPM1-207ENST00000403994 CHST1O43916 411 aa12.46□□□□□ -0.41
TPM1-207ENST00000403994 HAND1O96004 215 aa12.46□□□□□ -0.41
TPM1-207ENST00000403994 IGHA1P01876 353 aa12.46□□□□□ -0.41
TPM1-207ENST00000403994 ISG15P05161 165 aa12.46□□□□□ -0.41
TPM1-207ENST00000403994 HTR1AP08908 422 aa12.46□□□□□ -0.41
TPM1-207ENST00000403994 ZNF728P0DKX0 622 aa12.46□□□□□ -0.41
TPM1-207ENST00000403994 GABRB1P18505 474 aa12.46□□□□□ -0.41
TPM1-207ENST00000403994 BCL3P20749 454 aa12.46□□□□□ -0.41
TPM1-207ENST00000403994 AZGP1P25311 298 aaKnown RBP12.46□□□□□ -0.41
TPM1-207ENST00000403994 ACTA2P62736 377 aa12.46□□□□□ -0.41
TPM1-207ENST00000403994 ACTG2P63267 376 aa12.46□□□□□ -0.41
TPM1-207ENST00000403994 EDDM3AQ14507 147 aa12.46□□□□□ -0.41
TPM1-207ENST00000403994 SLC35E4Q6ICL7 350 aa12.46□□□□□ -0.41
TPM1-207ENST00000403994 CCDC121Q6ZUS5 278 aa12.46□□□□□ -0.41
TPM1-207ENST00000403994 KCTD20Q7Z5Y7 419 aa12.46□□□□□ -0.41
TPM1-207ENST00000403994 LHFPL4Q7Z7J7 247 aa12.46□□□□□ -0.41
TPM1-207ENST00000403994 EGFL6Q8IUX8 553 aa12.46□□□□□ -0.41
TPM1-207ENST00000403994 ACBD7Q8N6N7 88 aa12.46□□□□□ -0.41
TPM1-207ENST00000403994 OR10AC1Q8NH08 325 aa12.46□□□□□ -0.41
TPM1-207ENST00000403994 LGALS12Q96DT0 336 aa12.46□□□□□ -0.41
TPM1-207ENST00000403994 PELI1Q96FA3 418 aa12.46□□□□□ -0.41
TPM1-207ENST00000403994 C4orf36Q96KX1 117 aa12.46□□□□□ -0.41
TPM1-207ENST00000403994 AASSQ9UDR5 926 aa12.46□□□□□ -0.41
TPM1-207ENST00000403994 MEGF11A6BM72 1044 aa12.45□□□□□ -0.42
TPM1-207ENST00000403994 VGLL3A8MV65 326 aa12.45□□□□□ -0.42
TPM1-207ENST00000403994 TSPAN15O95858 294 aa12.45□□□□□ -0.42
TPM1-207ENST00000403994 IGHV1-8P0DP01 117 aa12.45□□□□□ -0.42
TPM1-207ENST00000403994 ATF1P18846 271 aa12.45□□□□□ -0.42
TPM1-207ENST00000403994 NPBWR2P48146 333 aa12.45□□□□□ -0.42
TPM1-207ENST00000403994 CCR9P51686 369 aa12.45□□□□□ -0.42
TPM1-207ENST00000403994 ATP1B3P54709 279 aa12.45□□□□□ -0.42
TPM1-207ENST00000403994 MTCP1P56278 107 aa12.45□□□□□ -0.42
TPM1-207ENST00000403994 LGALS4P56470 323 aa12.45□□□□□ -0.42
TPM1-207ENST00000403994 SPIN3Q5JUX0 258 aa12.45□□□□□ -0.42
TPM1-207ENST00000403994 ZNF626Q68DY1 528 aa12.45□□□□□ -0.42
TPM1-207ENST00000403994 LHFPL2Q6ZUX7 228 aa12.45□□□□□ -0.42
TPM1-207ENST00000403994 ENTHD1Q8IYW4 607 aa12.45□□□□□ -0.42
TPM1-207ENST00000403994 DYNAPQ8N1N2 210 aa12.45□□□□□ -0.42
TPM1-207ENST00000403994 OR4C13Q8NGP0 309 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms