RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 RAB27BO00194 218 aa12.24□□□□□ -0.45
SCAF4-202ENST00000399804 ZNF205O95201 554 aa12.24□□□□□ -0.45
SCAF4-202ENST00000399804 PDZK1IP1Q13113 114 aa12.24□□□□□ -0.45
SCAF4-202ENST00000399804 ATPAF1Q5TC12 328 aaPredicted RBP12.24□□□□□ -0.45
SCAF4-202ENST00000399804 FAM214BQ7L5A3 538 aa12.24□□□□□ -0.45
SCAF4-202ENST00000399804 STX12Q86Y82 276 aa12.24□□□□□ -0.45
SCAF4-202ENST00000399804 SPAG16Q8N0X2 631 aa12.24□□□□□ -0.45
SCAF4-202ENST00000399804 GLYATL2Q8WU03 294 aa12.24□□□□□ -0.45
SCAF4-202ENST00000399804 LPAR5Q9H1C0 372 aa12.24□□□□□ -0.45
SCAF4-202ENST00000399804 RAB9BQ9NP90 201 aa12.24□□□□□ -0.45
SCAF4-202ENST00000399804 ELF5Q9UKW6 265 aaPredicted RBP12.24□□□□□ -0.45
SCAF4-202ENST00000399804 MPC1Q9Y5U8 109 aa12.24□□□□□ -0.45
SCAF4-202ENST00000399804 ZNF106Q9H2Y7 1883 aaKnown RBP12.23□□□□□ -0.45
SCAF4-202ENST00000399804 PIGYQ3MUY2 71 aa12.23□□□□□ -0.45
SCAF4-202ENST00000399804 LILRB2Q8N423 598 aa12.23□□□□□ -0.45
SCAF4-202ENST00000399804 ZNF680Q8NEM1 530 aa12.23□□□□□ -0.45
SCAF4-202ENST00000399804 OR2Z1Q8NG97 314 aa12.23□□□□□ -0.45
SCAF4-202ENST00000399804 WDR13Q9H1Z4 485 aa12.23□□□□□ -0.45
SCAF4-202ENST00000399804 RIMS4Q9H426 269 aaPredicted RBP12.23□□□□□ -0.45
SCAF4-202ENST00000399804 NARFLQ9H6Q4 476 aa12.23□□□□□ -0.45
SCAF4-202ENST00000399804 KCNK7Q9Y2U2 307 aa12.23□□□□□ -0.45
SCAF4-202ENST00000399804 SPINT2O43291 252 aa12.23□□□□□ -0.45
SCAF4-202ENST00000399804 NXPH3O95157 252 aa12.23□□□□□ -0.45
SCAF4-202ENST00000399804 Q0VFX4 171 aa12.23□□□□□ -0.45
SCAF4-202ENST00000399804 CATR1Q13166 79 aa12.23□□□□□ -0.45
SCAF4-202ENST00000399804 ESCO2Q56NI9 601 aa12.23□□□□□ -0.45
SCAF4-202ENST00000399804 PHYHD1Q5SRE7 291 aa12.23□□□□□ -0.45
SCAF4-202ENST00000399804 OR11H7Q8NGC8 314 aa12.23□□□□□ -0.45
SCAF4-202ENST00000399804 ARPC5LQ9BPX5 153 aa12.23□□□□□ -0.45
SCAF4-202ENST00000399804 SMCO3A2RU48 225 aa12.23□□□□□ -0.45
SCAF4-202ENST00000399804 PINLYPA6NC86 204 aa12.23□□□□□ -0.45
SCAF4-202ENST00000399804 OR5B21A6NL26 309 aa12.23□□□□□ -0.45
SCAF4-202ENST00000399804 TNFSF12O43508 249 aa12.23□□□□□ -0.45
SCAF4-202ENST00000399804 SPRY3O43610 288 aa12.23□□□□□ -0.45
SCAF4-202ENST00000399804 NEURL1O76050 574 aa12.23□□□□□ -0.45
SCAF4-202ENST00000399804 RPS4Y2Q8TD47 263 aa12.23□□□□□ -0.45
SCAF4-202ENST00000399804 TSNAXQ99598 290 aaKnown RBP12.23□□□□□ -0.45
SCAF4-202ENST00000399804 EIF5A2Q9GZV4 153 aaKnown RBP12.23□□□□□ -0.45
SCAF4-202ENST00000399804 WNT5BQ9H1J7 359 aa12.23□□□□□ -0.45
SCAF4-202ENST00000399804 CHD7Q9P2D1 2997 aa12.23□□□□□ -0.45
SCAF4-202ENST00000399804 PCDH15Q96QU1 1955 aa12.23□□□□□ -0.45
SCAF4-202ENST00000399804 COL4A3Q01955 1670 aa12.23□□□□□ -0.45
SCAF4-202ENST00000399804 FPR2P25090 351 aa12.22□□□□□ -0.45
SCAF4-202ENST00000399804 ERVK-16P61578 105 aa12.22□□□□□ -0.45
SCAF4-202ENST00000399804 RPL23AP62750 156 aaKnown RBP12.22□□□□□ -0.45
SCAF4-202ENST00000399804 OR13C8Q8NGS7 320 aa12.22□□□□□ -0.45
SCAF4-202ENST00000399804 DECR2Q9NUI1 292 aa12.22□□□□□ -0.45
SCAF4-202ENST00000399804 UBE2V2Q15819 145 aa12.22□□□□□ -0.45
SCAF4-202ENST00000399804 MICBQ29980 383 aa12.22□□□□□ -0.45
SCAF4-202ENST00000399804 TOR2AQ5JU69 321 aa12.22□□□□□ -0.45
SCAF4-202ENST00000399804 OR13G1Q8NGZ3 307 aa12.22□□□□□ -0.45
SCAF4-202ENST00000399804 FAM234AQ9H0X4 552 aa12.22□□□□□ -0.45
SCAF4-202ENST00000399804 TINAGQ9UJW2 476 aa12.22□□□□□ -0.45
SCAF4-202ENST00000399804 KLK13Q9UKR3 277 aa12.22□□□□□ -0.45
SCAF4-202ENST00000399804 LRRC3CA6NJW4 275 aa12.22□□□□□ -0.45
SCAF4-202ENST00000399804 TMEM268Q5VZI3 342 aa12.22□□□□□ -0.45
SCAF4-202ENST00000399804 PPP1R3CQ9UQK1 317 aa12.22□□□□□ -0.45
SCAF4-202ENST00000399804 C9orf170A2RU37 121 aa12.22□□□□□ -0.45
SCAF4-202ENST00000399804 C7orf66A4D0T2 115 aa12.22□□□□□ -0.45
SCAF4-202ENST00000399804 CALCRP30988 508 aa12.22□□□□□ -0.45
SCAF4-202ENST00000399804 CDH26Q8IXH8 852 aa12.22□□□□□ -0.45
SCAF4-202ENST00000399804 ARL11Q969Q4 196 aa12.22□□□□□ -0.45
SCAF4-202ENST00000399804 HDHD3Q9BSH5 251 aaPredicted RBP12.22□□□□□ -0.45
SCAF4-202ENST00000399804 OR2J1Q9GZK6 312 aa12.22□□□□□ -0.45
SCAF4-202ENST00000399804 ANXA10Q9UJ72 324 aa12.22□□□□□ -0.45
SCAF4-202ENST00000399804 PKDREJQ9NTG1 2253 aa12.21□□□□□ -0.45
SCAF4-202ENST00000399804 CDIPTO14735 213 aa12.21□□□□□ -0.45
SCAF4-202ENST00000399804 ST8SIA3O43173 380 aa12.21□□□□□ -0.45
SCAF4-202ENST00000399804 LRP3O75074 770 aa12.21□□□□□ -0.45
SCAF4-202ENST00000399804 TSPAN15O95858 294 aa12.21□□□□□ -0.45
SCAF4-202ENST00000399804 PDGFAP04085 211 aa12.21□□□□□ -0.45
SCAF4-202ENST00000399804 ACOT7LQ6ZUV0 252 aa12.21□□□□□ -0.45
SCAF4-202ENST00000399804 OR10AD1Q8NGE0 317 aa12.21□□□□□ -0.45
SCAF4-202ENST00000399804 GHITMQ9H3K2 345 aa12.21□□□□□ -0.45
SCAF4-202ENST00000399804 HRH4Q9H3N8 390 aa12.21□□□□□ -0.45
SCAF4-202ENST00000399804 RNF212BA8MTL3 300 aa12.21□□□□□ -0.45
SCAF4-202ENST00000399804 M0R036 132 aa12.21□□□□□ -0.45
SCAF4-202ENST00000399804 NFYBP25208 207 aa12.21□□□□□ -0.45
SCAF4-202ENST00000399804 ZNF808Q8N4W9 903 aaPredicted RBP12.21□□□□□ -0.45
SCAF4-202ENST00000399804 SLC25A40Q8TBP6 338 aa12.21□□□□□ -0.45
SCAF4-202ENST00000399804 FAM117AQ9C073 453 aa12.21□□□□□ -0.45
SCAF4-202ENST00000399804 PLEKHF2Q9H8W4 249 aa12.21□□□□□ -0.45
SCAF4-202ENST00000399804 DIDO1Q9BTC0 2240 aaKnown RBP12.21□□□□□ -0.46
SCAF4-202ENST00000399804 SULT1A3P0DMM9 295 aa12.21□□□□□ -0.46
SCAF4-202ENST00000399804 SULT1A4P0DMN0 295 aa12.21□□□□□ -0.46
SCAF4-202ENST00000399804 ZNF250P15622 560 aa12.21□□□□□ -0.46
SCAF4-202ENST00000399804 TNFSF10P50591 281 aa12.21□□□□□ -0.46
SCAF4-202ENST00000399804 CLINT1Q14677 625 aa12.21□□□□□ -0.46
SCAF4-202ENST00000399804 ZNF260Q3ZCT1 412 aa12.21□□□□□ -0.46
SCAF4-202ENST00000399804 SPICQ8N5J4 248 aa12.21□□□□□ -0.46
SCAF4-202ENST00000399804 CD300LFQ8TDQ1 290 aa12.21□□□□□ -0.46
SCAF4-202ENST00000399804 DYRK2Q92630 601 aa12.21□□□□□ -0.46
SCAF4-202ENST00000399804 SLC25A31Q9H0C2 315 aa12.21□□□□□ -0.46
SCAF4-202ENST00000399804 AK3Q9UIJ7 227 aa12.21□□□□□ -0.46
SCAF4-202ENST00000399804 GPR137BO60478 399 aa12.2□□□□□ -0.46
SCAF4-202ENST00000399804 CEACAM1P13688 526 aa12.2□□□□□ -0.46
SCAF4-202ENST00000399804 MSMO1Q15800 293 aa12.2□□□□□ -0.46
SCAF4-202ENST00000399804 TMEM255AQ5JRV8 349 aa12.2□□□□□ -0.46
SCAF4-202ENST00000399804 MYO7BQ6PIF6 2116 aa12.2□□□□□ -0.46
SCAF4-202ENST00000399804 RNF150Q9ULK6 438 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms