RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 FRRS1LQ9P0K9 344 aa10.95□□□□□ -0.66
VCX3A-202ENST00000398729 VPREB3Q9UKI3 123 aa10.95□□□□□ -0.66
VCX3A-202ENST00000398729 IGKV1-27A0A075B6S5 117 aa10.94□□□□□ -0.66
VCX3A-202ENST00000398729 J3QLW9 94 aa10.94□□□□□ -0.66
VCX3A-202ENST00000398729 K7N7A8 449 aa10.94□□□□□ -0.66
VCX3A-202ENST00000398729 CYB5AP00167 134 aa10.94□□□□□ -0.66
VCX3A-202ENST00000398729 CHRM2P08172 466 aa10.94□□□□□ -0.66
VCX3A-202ENST00000398729 ZNF19P17023 458 aa10.94□□□□□ -0.66
VCX3A-202ENST00000398729 ZNF20P17024 532 aa10.94□□□□□ -0.66
VCX3A-202ENST00000398729 PRKACBP22694 351 aa10.94□□□□□ -0.66
VCX3A-202ENST00000398729 RBP2P50120 134 aa10.94□□□□□ -0.66
VCX3A-202ENST00000398729 CCR9P51686 369 aa10.94□□□□□ -0.66
VCX3A-202ENST00000398729 ATP1B3P54709 279 aa10.94□□□□□ -0.66
VCX3A-202ENST00000398729 COL10A1Q03692 680 aa10.94□□□□□ -0.66
VCX3A-202ENST00000398729 SRSF4Q08170 494 aaKnown RBP10.94□□□□□ -0.66
VCX3A-202ENST00000398729 DHRS7BQ6IAN0 325 aaPredicted RBP10.94□□□□□ -0.66
VCX3A-202ENST00000398729 HCP5Q6MZN7 132 aa10.94□□□□□ -0.66
VCX3A-202ENST00000398729 ZBTB49Q6ZSB9 765 aa10.94□□□□□ -0.66
VCX3A-202ENST00000398729 EGFL6Q8IUX8 553 aa10.94□□□□□ -0.66
VCX3A-202ENST00000398729 MKXQ8IYA7 352 aa10.94□□□□□ -0.66
VCX3A-202ENST00000398729 Q8IYB0 196 aa10.94□□□□□ -0.66
VCX3A-202ENST00000398729 BEND2Q8NDZ0 799 aa10.94□□□□□ -0.66
VCX3A-202ENST00000398729 RNF166Q96A37 237 aaPredicted RBP10.94□□□□□ -0.66
VCX3A-202ENST00000398729 ADAT3Q96EY9 351 aaPredicted RBP10.94□□□□□ -0.66
VCX3A-202ENST00000398729 C4orf36Q96KX1 117 aa10.94□□□□□ -0.66
VCX3A-202ENST00000398729 Q96MT0 163 aa10.94□□□□□ -0.66
VCX3A-202ENST00000398729 S100A14Q9HCY8 104 aa10.94□□□□□ -0.66
VCX3A-202ENST00000398729 HHLA2Q9UM44 414 aa10.94□□□□□ -0.66
VCX3A-202ENST00000398729 EXOGQ9Y2C4 368 aaKnown RBP10.94□□□□□ -0.66
VCX3A-202ENST00000398729 RNF114Q9Y508 228 aa10.94□□□□□ -0.66
VCX3A-202ENST00000398729 KMT2CQ8NEZ4 4911 aaKnown RBP10.93□□□□□ -0.66
VCX3A-202ENST00000398729 F8VVB4 439 aa10.93□□□□□ -0.66
VCX3A-202ENST00000398729 F8VWA3 439 aa10.93□□□□□ -0.66
VCX3A-202ENST00000398729 INMTO95050 263 aa10.93□□□□□ -0.66
VCX3A-202ENST00000398729 OCM2P0CE71 109 aa10.93□□□□□ -0.66
VCX3A-202ENST00000398729 OCMP0CE72 109 aaPredicted RBP10.93□□□□□ -0.66
VCX3A-202ENST00000398729 DBTP11182 482 aaKnown RBP10.93□□□□□ -0.66
VCX3A-202ENST00000398729 CCL3L1P16619 93 aa10.93□□□□□ -0.66
VCX3A-202ENST00000398729 GABRB1P18505 474 aa10.93□□□□□ -0.66
VCX3A-202ENST00000398729 ATF1P18846 271 aa10.93□□□□□ -0.66
VCX3A-202ENST00000398729 TGFBR2P37173 567 aa10.93□□□□□ -0.66
VCX3A-202ENST00000398729 MTCP1P56278 107 aa10.93□□□□□ -0.66
VCX3A-202ENST00000398729 NANOS3P60323 173 aaKnown RBP10.93□□□□□ -0.66
VCX3A-202ENST00000398729 ERVFRD-1P60508 538 aa10.93□□□□□ -0.66
VCX3A-202ENST00000398729 ZNF91Q05481 1191 aa10.93□□□□□ -0.66
VCX3A-202ENST00000398729 GALEQ14376 348 aa10.93□□□□□ -0.66
VCX3A-202ENST00000398729 ZNF273Q14593 569 aa10.93□□□□□ -0.66
VCX3A-202ENST00000398729 BRICD5Q6PL45 260 aa10.93□□□□□ -0.66
VCX3A-202ENST00000398729 UTS2BQ765I0 119 aa10.93□□□□□ -0.66
VCX3A-202ENST00000398729 GDPD3Q7L5L3 318 aa10.93□□□□□ -0.66
VCX3A-202ENST00000398729 ENTHD1Q8IYW4 607 aa10.93□□□□□ -0.66
VCX3A-202ENST00000398729 PQLC1Q8N2U9 271 aa10.93□□□□□ -0.66
VCX3A-202ENST00000398729 C11orf42Q8N5U0 333 aa10.93□□□□□ -0.66
VCX3A-202ENST00000398729 ZSCAN4Q8NAM6 433 aaPredicted RBP10.93□□□□□ -0.66
VCX3A-202ENST00000398729 LINC01006Q8NI28 216 aa10.93□□□□□ -0.66
VCX3A-202ENST00000398729 EMG1Q92979 244 aaKnown RBP10.93□□□□□ -0.66
VCX3A-202ENST00000398729 FGGYQ96C11 551 aa10.93□□□□□ -0.66
VCX3A-202ENST00000398729 LGALS12Q96DT0 336 aa10.93□□□□□ -0.66
VCX3A-202ENST00000398729 PELI1Q96FA3 418 aa10.93□□□□□ -0.66
VCX3A-202ENST00000398729 AASSQ9UDR5 926 aa10.93□□□□□ -0.66
VCX3A-202ENST00000398729 IGKV1-9A0A0C4DH69 117 aa10.92□□□□□ -0.66
VCX3A-202ENST00000398729 LOC100130705A0A1B0GUX0 176 aa10.92□□□□□ -0.66
VCX3A-202ENST00000398729 ZNF737O75373 536 aa10.92□□□□□ -0.66
VCX3A-202ENST00000398729 FADS2O95864 444 aaKnown RBP10.92□□□□□ -0.66
VCX3A-202ENST00000398729 PIPP12273 146 aaPredicted RBP10.92□□□□□ -0.66
VCX3A-202ENST00000398729 AZGP1P25311 298 aaKnown RBP10.92□□□□□ -0.66
VCX3A-202ENST00000398729 POU3F4P49335 361 aa10.92□□□□□ -0.66
VCX3A-202ENST00000398729 LGALS4P56470 323 aa10.92□□□□□ -0.66
VCX3A-202ENST00000398729 EDDM3BP56851 147 aa10.92□□□□□ -0.66
VCX3A-202ENST00000398729 ALKBH1Q13686 389 aaKnown RBP10.92□□□□□ -0.66
VCX3A-202ENST00000398729 LHFPL2Q6ZUX7 228 aa10.92□□□□□ -0.66
VCX3A-202ENST00000398729 LHFPL3Q86UP9 236 aa10.92□□□□□ -0.66
VCX3A-202ENST00000398729 OR8H2Q8N162 312 aa10.92□□□□□ -0.66
VCX3A-202ENST00000398729 ZNF676Q8N7Q3 588 aa10.92□□□□□ -0.66
VCX3A-202ENST00000398729 OR13C3Q8NGS6 347 aa10.92□□□□□ -0.66
VCX3A-202ENST00000398729 RHOXF1Q8NHV9 184 aa10.92□□□□□ -0.66
VCX3A-202ENST00000398729 SPSB1Q96BD6 273 aa10.92□□□□□ -0.66
VCX3A-202ENST00000398729 SNX22Q96L94 193 aa10.92□□□□□ -0.66
VCX3A-202ENST00000398729 SLC29A1Q99808 456 aa10.92□□□□□ -0.66
VCX3A-202ENST00000398729 SSX3Q99909 188 aa10.92□□□□□ -0.66
VCX3A-202ENST00000398729 ALG8Q9BVK2 526 aa10.92□□□□□ -0.66
VCX3A-202ENST00000398729 SEBOXQ9HB31 216 aaPredicted RBP10.92□□□□□ -0.66
VCX3A-202ENST00000398729 TRBV2A0A0J9YWF9 115 aa10.91□□□□□ -0.66
VCX3A-202ENST00000398729 OR4C45A6NMZ5 311 aa10.91□□□□□ -0.66
VCX3A-202ENST00000398729 C17orf98A8MV24 154 aa10.91□□□□□ -0.66
VCX3A-202ENST00000398729 H3BUX3 64 aa10.91□□□□□ -0.66
VCX3A-202ENST00000398729 HAND1O96004 215 aa10.91□□□□□ -0.66
VCX3A-202ENST00000398729 RPSAP08865 295 aaKnown RBP10.91□□□□□ -0.66
VCX3A-202ENST00000398729 COX7A1P24310 79 aa10.91□□□□□ -0.66
VCX3A-202ENST00000398729 MRPL28Q13084 256 aaKnown RBP10.91□□□□□ -0.66
VCX3A-202ENST00000398729 LRRC75BQ2VPJ9 315 aa10.91□□□□□ -0.66
VCX3A-202ENST00000398729 Q6ZSV7 163 aa10.91□□□□□ -0.66
VCX3A-202ENST00000398729 FAM58AQ8N1B3 248 aa10.91□□□□□ -0.66
VCX3A-202ENST00000398729 SYS1Q8N2H4 156 aa10.91□□□□□ -0.66
VCX3A-202ENST00000398729 C17orf50Q8WW18 174 aa10.91□□□□□ -0.66
VCX3A-202ENST00000398729 OPALINQ96PE5 141 aa10.91□□□□□ -0.66
VCX3A-202ENST00000398729 CITED1Q99966 193 aa10.91□□□□□ -0.66
VCX3A-202ENST00000398729 MEGF9Q9H1U4 602 aa10.91□□□□□ -0.66
VCX3A-202ENST00000398729 C16orf95Q9H693 158 aa10.91□□□□□ -0.66
VCX3A-202ENST00000398729 NEK6Q9HC98 313 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms