RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 OR4D6Q8NGJ1 314 aa16.61■□□□□ 0.25
PDLIM2-204ENST00000397760 OR13C9Q8NGT0 318 aa16.61■□□□□ 0.25
PDLIM2-204ENST00000397760 CHST6Q9GZX3 395 aa16.61■□□□□ 0.25
PDLIM2-204ENST00000397760 ARL6Q9H0F7 186 aa16.61■□□□□ 0.25
PDLIM2-204ENST00000397760 NARFLQ9H6Q4 476 aa16.61■□□□□ 0.25
PDLIM2-204ENST00000397760 TMA7Q9Y2S6 64 aaKnown RBP16.61■□□□□ 0.25
PDLIM2-204ENST00000397760 FXYD6-FXYD2A0A087WZ82 144 aa16.6■□□□□ 0.25
PDLIM2-204ENST00000397760 A0A0D9SG52 128 aa16.6■□□□□ 0.25
PDLIM2-204ENST00000397760 RAB27BO00194 218 aa16.6■□□□□ 0.25
PDLIM2-204ENST00000397760 RAB3AP20336 220 aa16.6■□□□□ 0.25
PDLIM2-204ENST00000397760 UCP2P55851 309 aa16.6■□□□□ 0.25
PDLIM2-204ENST00000397760 QRFPP83859 136 aa16.6■□□□□ 0.25
PDLIM2-204ENST00000397760 OR8B8Q15620 311 aa16.6■□□□□ 0.25
PDLIM2-204ENST00000397760 FAM189A2Q15884 450 aa16.6■□□□□ 0.25
PDLIM2-204ENST00000397760 C3orf36Q3SXR2 165 aa16.6■□□□□ 0.25
PDLIM2-204ENST00000397760 ATPAF1Q5TC12 328 aaPredicted RBP16.6■□□□□ 0.25
PDLIM2-204ENST00000397760 DCAF12L2Q5VW00 463 aa16.6■□□□□ 0.25
PDLIM2-204ENST00000397760 MYO7BQ6PIF6 2116 aa16.6■□□□□ 0.25
PDLIM2-204ENST00000397760 FXYD6Q9H0Q3 95 aa16.6■□□□□ 0.25
PDLIM2-204ENST00000397760 OPA3Q9H6K4 179 aa16.6■□□□□ 0.25
PDLIM2-204ENST00000397760 CNTD2Q9H8S5 307 aa16.6■□□□□ 0.25
PDLIM2-204ENST00000397760 IGHV2OR16-5A0A0B4J2B6 119 aa16.59■□□□□ 0.25
PDLIM2-204ENST00000397760 MFSD2BA6NFX1 497 aa16.59■□□□□ 0.25
PDLIM2-204ENST00000397760 SIX6O95475 246 aa16.59■□□□□ 0.25
PDLIM2-204ENST00000397760 NMBP08949 121 aa16.59■□□□□ 0.25
PDLIM2-204ENST00000397760 ZP3P21754 424 aa16.59■□□□□ 0.25
PDLIM2-204ENST00000397760 C4orf17Q53FE4 359 aa16.59■□□□□ 0.25
PDLIM2-204ENST00000397760 OR5M8Q8NGP6 311 aa16.59■□□□□ 0.25
PDLIM2-204ENST00000397760 CA5BP1Q8WTZ4 195 aa16.59■□□□□ 0.25
PDLIM2-204ENST00000397760 PP6455Q8WZ26 134 aa16.59■□□□□ 0.25
PDLIM2-204ENST00000397760 WDR89Q96FK6 387 aaPredicted RBP16.59■□□□□ 0.25
PDLIM2-204ENST00000397760 REG4Q9BYZ8 158 aa16.59■□□□□ 0.25
PDLIM2-204ENST00000397760 TINAGL1Q9GZM7 467 aaPredicted RBP16.59■□□□□ 0.25
PDLIM2-204ENST00000397760 NKX2-6A6NCS4 301 aa16.59■□□□□ 0.25
PDLIM2-204ENST00000397760 PRB1P04280 392 aa16.59■□□□□ 0.25
PDLIM2-204ENST00000397760 CHRM2P08172 466 aa16.59■□□□□ 0.25
PDLIM2-204ENST00000397760 ZNF250P15622 560 aa16.59■□□□□ 0.25
PDLIM2-204ENST00000397760 PPP1CBP62140 327 aa16.59■□□□□ 0.25
PDLIM2-204ENST00000397760 NAAAQ02083 359 aa16.59■□□□□ 0.25
PDLIM2-204ENST00000397760 FBXL19-AS1Q494R0 122 aa16.59■□□□□ 0.25
PDLIM2-204ENST00000397760 RNASE10Q5GAN6 216 aaKnown RBP16.59■□□□□ 0.25
PDLIM2-204ENST00000397760 SPATA46Q5T0L3 261 aa16.59■□□□□ 0.25
PDLIM2-204ENST00000397760 LIN54Q6MZP7 749 aa16.59■□□□□ 0.25
PDLIM2-204ENST00000397760 OR2W3Q7Z3T1 314 aa16.59■□□□□ 0.25
PDLIM2-204ENST00000397760 SLC25A42Q86VD7 318 aa16.59■□□□□ 0.25
PDLIM2-204ENST00000397760 CHST5Q9GZS9 411 aa16.59■□□□□ 0.25
PDLIM2-204ENST00000397760 MFFQ9GZY8 342 aa16.59■□□□□ 0.25
PDLIM2-204ENST00000397760 PLEKHA6Q9Y2H5 1048 aa16.59■□□□□ 0.25
PDLIM2-204ENST00000397760 KALRNO60229 2985 aa16.58■□□□□ 0.25
PDLIM2-204ENST00000397760 A0A1B0GW55 424 aa16.58■□□□□ 0.24
PDLIM2-204ENST00000397760 M0QYG6 137 aa16.58■□□□□ 0.24
PDLIM2-204ENST00000397760 DUX4L2P0CJ85 424 aa16.58■□□□□ 0.24
PDLIM2-204ENST00000397760 DUX4L3P0CJ86 424 aa16.58■□□□□ 0.24
PDLIM2-204ENST00000397760 DUX4L4P0CJ87 422 aa16.58■□□□□ 0.24
PDLIM2-204ENST00000397760 DUX4L5P0CJ88 424 aa16.58■□□□□ 0.24
PDLIM2-204ENST00000397760 DUX4L6P0CJ89 424 aa16.58■□□□□ 0.24
PDLIM2-204ENST00000397760 DUX4L7P0CJ90 424 aa16.58■□□□□ 0.24
PDLIM2-204ENST00000397760 SLC25A4P12235 298 aa16.58■□□□□ 0.24
PDLIM2-204ENST00000397760 ZNF345Q14585 488 aa16.58■□□□□ 0.24
PDLIM2-204ENST00000397760 LY6G6FQ5SQ64 297 aa16.58■□□□□ 0.24
PDLIM2-204ENST00000397760 UNQ6126/PRO20091Q6UXV3 157 aa16.58■□□□□ 0.24
PDLIM2-204ENST00000397760 EIF4E3Q8N5X7 224 aaKnown RBP16.58■□□□□ 0.24
PDLIM2-204ENST00000397760 OR1J1Q8NGS3 322 aa16.58■□□□□ 0.24
PDLIM2-204ENST00000397760 OR13C8Q8NGS7 320 aa16.58■□□□□ 0.24
PDLIM2-204ENST00000397760 RNASE6Q93091 150 aaKnown RBP16.58■□□□□ 0.24
PDLIM2-204ENST00000397760 SDHAF2Q9NX18 166 aa16.58■□□□□ 0.24
PDLIM2-204ENST00000397760 DUX4Q9UBX2 424 aa16.58■□□□□ 0.24
PDLIM2-204ENST00000397760 PFDN2Q9UHV9 154 aa16.58■□□□□ 0.24
PDLIM2-204ENST00000397760 TMEM235A6NFC5 223 aa16.57■□□□□ 0.24
PDLIM2-204ENST00000397760 KRBOX1C9JBD0 128 aa16.57■□□□□ 0.24
PDLIM2-204ENST00000397760 MGMTP16455 207 aa16.57■□□□□ 0.24
PDLIM2-204ENST00000397760 DHRS2Q13268 280 aa16.57■□□□□ 0.24
PDLIM2-204ENST00000397760 CDSNQ15517 529 aa16.57■□□□□ 0.24
PDLIM2-204ENST00000397760 MOGAT2Q3SYC2 334 aa16.57■□□□□ 0.24
PDLIM2-204ENST00000397760 SSX8Q7RTT4 187 aa16.57■□□□□ 0.24
PDLIM2-204ENST00000397760 OR5AS1Q8N127 324 aa16.57■□□□□ 0.24
PDLIM2-204ENST00000397760 OR56B2PQ8NGI1 322 aa16.57■□□□□ 0.24
PDLIM2-204ENST00000397760 OR52N4Q8NGI2 321 aa16.57■□□□□ 0.24
PDLIM2-204ENST00000397760 SLC6A7Q99884 636 aa16.57■□□□□ 0.24
PDLIM2-204ENST00000397760 OR2J1Q9GZK6 312 aa16.57■□□□□ 0.24
PDLIM2-204ENST00000397760 IGKV1-9A0A0C4DH69 117 aa16.56■□□□□ 0.24
PDLIM2-204ENST00000397760 ZNF816-ZNF321PA0A0X1KG74 233 aa16.56■□□□□ 0.24
PDLIM2-204ENST00000397760 TMEM14DPA8MWL7 114 aa16.56■□□□□ 0.24
PDLIM2-204ENST00000397760 UBBP0CG47 229 aa16.56■□□□□ 0.24
PDLIM2-204ENST00000397760 ERVS71-1P61550 626 aa16.56■□□□□ 0.24
PDLIM2-204ENST00000397760 RPS27AP62979 156 aaKnown RBP16.56■□□□□ 0.24
PDLIM2-204ENST00000397760 UBA52P62987 128 aaKnown RBP16.56■□□□□ 0.24
PDLIM2-204ENST00000397760 UBE2V2Q15819 145 aa16.56■□□□□ 0.24
PDLIM2-204ENST00000397760 DMRTC1Q5HYR2 192 aa16.56■□□□□ 0.24
PDLIM2-204ENST00000397760 WFDC8Q8IUA0 241 aa16.56■□□□□ 0.24
PDLIM2-204ENST00000397760 LRRC46Q96FV0 321 aa16.56■□□□□ 0.24
PDLIM2-204ENST00000397760 NKX3-1Q99801 234 aaPredicted RBP16.56■□□□□ 0.24
PDLIM2-204ENST00000397760 KCNJ16Q9NPI9 418 aa16.56■□□□□ 0.24
PDLIM2-204ENST00000397760 GPR173Q9NS66 373 aa16.56■□□□□ 0.24
PDLIM2-204ENST00000397760 IGSF10Q6WRI0 2623 aa16.56■□□□□ 0.24
PDLIM2-204ENST00000397760 NBASA2RRP1 2371 aa16.56■□□□□ 0.24
PDLIM2-204ENST00000397760 OR2F2O95006 317 aa16.56■□□□□ 0.24
PDLIM2-204ENST00000397760 CRYAAP02489 173 aa16.56■□□□□ 0.24
PDLIM2-204ENST00000397760 THBDP07204 575 aa16.56■□□□□ 0.24
PDLIM2-204ENST00000397760 VSIG8P0DPA2 414 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms