RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 SPERTQ8NA61 448 aa11.42□□□□□ -0.58
SEC13-205ENST00000397101 DNAAF1Q8NEP3 725 aa11.42□□□□□ -0.58
SEC13-205ENST00000397101 OR10AD1Q8NGE0 317 aa11.42□□□□□ -0.58
SEC13-205ENST00000397101 OR51A2Q8NGJ7 313 aa11.42□□□□□ -0.58
SEC13-205ENST00000397101 GTF3AQ92664 365 aaKnown RBP11.42□□□□□ -0.58
SEC13-205ENST00000397101 SPSB1Q96BD6 273 aa11.42□□□□□ -0.58
SEC13-205ENST00000397101 CPNE2Q96FN4 548 aaPredicted RBP11.42□□□□□ -0.58
SEC13-205ENST00000397101 ZNF48Q96MX3 618 aaPredicted RBP11.42□□□□□ -0.58
SEC13-205ENST00000397101 SPACA5Q96QH8 159 aa11.42□□□□□ -0.58
SEC13-205ENST00000397101 SLC30A2Q9BRI3 323 aa11.42□□□□□ -0.58
SEC13-205ENST00000397101 RBM38Q9H0Z9 239 aaKnown RBP11.42□□□□□ -0.58
SEC13-205ENST00000397101 PLGRKTQ9HBL7 147 aa11.42□□□□□ -0.58
SEC13-205ENST00000397101 C14orf119Q9NWQ9 140 aa11.42□□□□□ -0.58
SEC13-205ENST00000397101 ZNF69Q9UC07 566 aa11.42□□□□□ -0.58
SEC13-205ENST00000397101 ZNF701M0R085 212 aaPredicted RBP11.41□□□□□ -0.58
SEC13-205ENST00000397101 GRPP07492 148 aa11.41□□□□□ -0.58
SEC13-205ENST00000397101 ZNF93P35789 620 aaPredicted RBP11.41□□□□□ -0.58
SEC13-205ENST00000397101 RBP2P50120 134 aa11.41□□□□□ -0.58
SEC13-205ENST00000397101 MMP15P51511 669 aa11.41□□□□□ -0.58
SEC13-205ENST00000397101 GPM6AP51674 278 aa11.41□□□□□ -0.58
SEC13-205ENST00000397101 LCN2P80188 198 aa11.41□□□□□ -0.58
SEC13-205ENST00000397101 ZNF154Q13106 437 aa11.41□□□□□ -0.58
SEC13-205ENST00000397101 SLC9A3R2Q15599 337 aa11.41□□□□□ -0.58
SEC13-205ENST00000397101 KLF17Q5JT82 389 aaPredicted RBP11.41□□□□□ -0.58
SEC13-205ENST00000397101 LHFPL2Q6ZUX7 228 aa11.41□□□□□ -0.58
SEC13-205ENST00000397101 C9orf139Q6ZV77 190 aa11.41□□□□□ -0.58
SEC13-205ENST00000397101 LRRTM1Q86UE6 522 aa11.41□□□□□ -0.58
SEC13-205ENST00000397101 NKAIN3Q8N8D7 197 aa11.41□□□□□ -0.58
SEC13-205ENST00000397101 PNLDC1Q8NA58 520 aaKnown RBP11.41□□□□□ -0.58
SEC13-205ENST00000397101 OR52N4Q8NGI2 321 aa11.41□□□□□ -0.58
SEC13-205ENST00000397101 OR5A2Q8NGI9 324 aa11.41□□□□□ -0.58
SEC13-205ENST00000397101 OR5P3Q8WZ94 311 aa11.41□□□□□ -0.58
SEC13-205ENST00000397101 RFT1Q96AA3 541 aa11.41□□□□□ -0.58
SEC13-205ENST00000397101 FOXRED1Q96CU9 486 aaPredicted RBP11.41□□□□□ -0.58
SEC13-205ENST00000397101 DUX5Q96PT3 197 aa11.41□□□□□ -0.58
SEC13-205ENST00000397101 S100A13Q99584 98 aa11.41□□□□□ -0.58
SEC13-205ENST00000397101 MMP27Q9H306 513 aa11.41□□□□□ -0.58
SEC13-205ENST00000397101 ZDHHC8Q9ULC8 765 aa11.41□□□□□ -0.58
SEC13-205ENST00000397101 AUP1Q9Y679 476 aa11.41□□□□□ -0.58
SEC13-205ENST00000397101 V9GY05 133 aa11.41□□□□□ -0.58
SEC13-205ENST00000397101 NOTCH1P46531 2555 aa11.41□□□□□ -0.58
SEC13-205ENST00000397101 IGKV1-9A0A0C4DH69 117 aa11.4□□□□□ -0.58
SEC13-205ENST00000397101 IGHV3-64DA0A0J9YX35 117 aa11.4□□□□□ -0.58
SEC13-205ENST00000397101 SHISA3A0PJX4 238 aa11.4□□□□□ -0.58
SEC13-205ENST00000397101 ZSCAN5BA6NJL1 495 aa11.4□□□□□ -0.58
SEC13-205ENST00000397101 A6NLC8 198 aa11.4□□□□□ -0.58
SEC13-205ENST00000397101 F5H5P2 479 aa11.4□□□□□ -0.58
SEC13-205ENST00000397101 PLATP00750 562 aa11.4□□□□□ -0.58
SEC13-205ENST00000397101 IL1AP01583 271 aa11.4□□□□□ -0.58
SEC13-205ENST00000397101 ALDOBP05062 364 aa11.4□□□□□ -0.58
SEC13-205ENST00000397101 ADH4P08319 380 aa11.4□□□□□ -0.58
SEC13-205ENST00000397101 PPIAL4GP0DN37 164 aa11.4□□□□□ -0.58
SEC13-205ENST00000397101 SOX6P35712 828 aa11.4□□□□□ -0.58
SEC13-205ENST00000397101 RPS19P39019 145 aaKnown RBP11.4□□□□□ -0.58
SEC13-205ENST00000397101 POU3F4P49335 361 aa11.4□□□□□ -0.58
SEC13-205ENST00000397101 SRP9P49458 86 aaKnown RBP11.4□□□□□ -0.58
SEC13-205ENST00000397101 CAV3P56539 151 aa11.4□□□□□ -0.58
SEC13-205ENST00000397101 GNG3P63215 75 aa11.4□□□□□ -0.58
SEC13-205ENST00000397101 TNFAIP6P98066 277 aaPredicted RBP11.4□□□□□ -0.58
SEC13-205ENST00000397101 HNRNPA0Q13151 305 aaKnown RBP11.4□□□□□ -0.58
SEC13-205ENST00000397101 ASPHD2Q6ICH7 369 aa11.4□□□□□ -0.58
SEC13-205ENST00000397101 Q6ZR03 302 aa11.4□□□□□ -0.58
SEC13-205ENST00000397101 DIRC2Q96SL1 478 aa11.4□□□□□ -0.58
SEC13-205ENST00000397101 DCUN1D5Q9BTE7 237 aa11.4□□□□□ -0.58
SEC13-205ENST00000397101 ELL3Q9HB65 397 aaPredicted RBP11.4□□□□□ -0.58
SEC13-205ENST00000397101 ING4Q9UNL4 249 aa11.4□□□□□ -0.58
SEC13-205ENST00000397101 CACNG2Q9Y698 323 aa11.4□□□□□ -0.58
SEC13-205ENST00000397101 OR5B21A6NL26 309 aa11.39□□□□□ -0.59
SEC13-205ENST00000397101 NOTOA8MTQ0 251 aa11.39□□□□□ -0.59
SEC13-205ENST00000397101 A8MXK9 166 aa11.39□□□□□ -0.59
SEC13-205ENST00000397101 MLNRO43193 412 aa11.39□□□□□ -0.59
SEC13-205ENST00000397101 ALX3O95076 343 aa11.39□□□□□ -0.59
SEC13-205ENST00000397101 CYB5AP00167 134 aa11.39□□□□□ -0.59
SEC13-205ENST00000397101 IGHV1-46P01743 117 aa11.39□□□□□ -0.59
SEC13-205ENST00000397101 TMEM225BP0DP42 221 aa11.39□□□□□ -0.59
SEC13-205ENST00000397101 MDKP21741 143 aaPredicted RBP11.39□□□□□ -0.59
SEC13-205ENST00000397101 RORCP51449 518 aa11.39□□□□□ -0.59
SEC13-205ENST00000397101 OR10A3P58181 314 aa11.39□□□□□ -0.59
SEC13-205ENST00000397101 KISS1Q15726 138 aa11.39□□□□□ -0.59
SEC13-205ENST00000397101 RAB11BQ15907 218 aa11.39□□□□□ -0.59
SEC13-205ENST00000397101 IDNKQ5T6J7 187 aa11.39□□□□□ -0.59
SEC13-205ENST00000397101 HES5Q5TA89 166 aa11.39□□□□□ -0.59
SEC13-205ENST00000397101 FOXB2Q5VYV0 432 aa11.39□□□□□ -0.59
SEC13-205ENST00000397101 C16orf87Q6PH81 154 aa11.39□□□□□ -0.59
SEC13-205ENST00000397101 ZNF573Q86YE8 665 aa11.39□□□□□ -0.59
SEC13-205ENST00000397101 BCL6BQ8N143 479 aaPredicted RBP11.39□□□□□ -0.59
SEC13-205ENST00000397101 OR5D18Q8NGL1 313 aa11.39□□□□□ -0.59
SEC13-205ENST00000397101 HPSE2Q8WWQ2 592 aa11.39□□□□□ -0.59
SEC13-205ENST00000397101 CCL17Q92583 94 aa11.39□□□□□ -0.59
SEC13-205ENST00000397101 ITPKCQ96DU7 683 aa11.39□□□□□ -0.59
SEC13-205ENST00000397101 NKX3-1Q99801 234 aaPredicted RBP11.39□□□□□ -0.59
SEC13-205ENST00000397101 MRI1Q9BV20 369 aa11.39□□□□□ -0.59
SEC13-205ENST00000397101 EGLN1Q9GZT9 426 aa11.39□□□□□ -0.59
SEC13-205ENST00000397101 MMP26Q9NRE1 261 aa11.39□□□□□ -0.59
SEC13-205ENST00000397101 DAPK2Q9UIK4 370 aa11.39□□□□□ -0.59
SEC13-205ENST00000397101 INSIG2Q9Y5U4 225 aa11.39□□□□□ -0.59
SEC13-205ENST00000397101 TMEM210A6NLX4 147 aa11.38□□□□□ -0.59
SEC13-205ENST00000397101 CD55P08174 381 aa11.38□□□□□ -0.59
SEC13-205ENST00000397101 RANBP1P43487 201 aa11.38□□□□□ -0.59
SEC13-205ENST00000397101 HAAOP46952 286 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms