RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 ONECUT2O95948 504 aa12.88□□□□□ -0.35
CCNF-202ENST00000397066 GNRHRP30968 328 aa12.88□□□□□ -0.35
CCNF-202ENST00000397066 C9orf152Q5JTZ5 239 aa12.88□□□□□ -0.35
CCNF-202ENST00000397066 APCDD1LQ8NCL9 501 aa12.88□□□□□ -0.35
CCNF-202ENST00000397066 OR11L1Q8NGX0 322 aa12.88□□□□□ -0.35
CCNF-202ENST00000397066 SUCNR1Q9BXA5 334 aa12.88□□□□□ -0.35
CCNF-202ENST00000397066 CHST5Q9GZS9 411 aa12.88□□□□□ -0.35
CCNF-202ENST00000397066 SLC2A9Q9NRM0 540 aa12.88□□□□□ -0.35
CCNF-202ENST00000397066 RANBP2P49792 3224 aaKnown RBP12.87□□□□□ -0.35
CCNF-202ENST00000397066 PISDQ9UG56 409 aa12.87□□□□□ -0.35
CCNF-202ENST00000397066 G3V3Y1 287 aa12.87□□□□□ -0.35
CCNF-202ENST00000397066 D2HGDHQ8N465 521 aa12.87□□□□□ -0.35
CCNF-202ENST00000397066 LYZL4Q96KX0 146 aa12.87□□□□□ -0.35
CCNF-202ENST00000397066 ZNF727A8MUV8 499 aa12.87□□□□□ -0.35
CCNF-202ENST00000397066 FOSL2P15408 326 aa12.87□□□□□ -0.35
CCNF-202ENST00000397066 ZNF266Q14584 549 aa12.87□□□□□ -0.35
CCNF-202ENST00000397066 CNN3Q15417 329 aaKnown RBP12.87□□□□□ -0.35
CCNF-202ENST00000397066 AKR1C8PQ5T2L2 129 aa12.87□□□□□ -0.35
CCNF-202ENST00000397066 LIAT1Q6ZQX7 453 aa12.87□□□□□ -0.35
CCNF-202ENST00000397066 SLC25A43Q8WUT9 341 aaPredicted RBP12.87□□□□□ -0.35
CCNF-202ENST00000397066 BRWD1Q9NSI6 2320 aa12.87□□□□□ -0.35
CCNF-202ENST00000397066 OR7C1O76099 320 aaPredicted RBP12.86□□□□□ -0.35
CCNF-202ENST00000397066 BCL2L14Q9BZR8 327 aa12.86□□□□□ -0.35
CCNF-202ENST00000397066 SSSCA1O60232 199 aa12.86□□□□□ -0.35
CCNF-202ENST00000397066 OR8U8P0C7N1 319 aa12.86□□□□□ -0.35
CCNF-202ENST00000397066 PNLIPP16233 465 aa12.86□□□□□ -0.35
CCNF-202ENST00000397066 NKX2-1P43699 371 aaPredicted RBP12.86□□□□□ -0.35
CCNF-202ENST00000397066 POC1BQ8TC44 478 aa12.86□□□□□ -0.35
CCNF-202ENST00000397066 OR6C1Q96RD1 312 aa12.86□□□□□ -0.35
CCNF-202ENST00000397066 SPSB2Q99619 263 aa12.86□□□□□ -0.35
CCNF-202ENST00000397066 PARPBPQ9NWS1 579 aa12.86□□□□□ -0.35
CCNF-202ENST00000397066 TP53I11O14683 189 aa12.86□□□□□ -0.35
CCNF-202ENST00000397066 PAX6P26367 422 aa12.86□□□□□ -0.35
CCNF-202ENST00000397066 MALLQ13021 153 aa12.86□□□□□ -0.35
CCNF-202ENST00000397066 IL13RA2Q14627 380 aa12.86□□□□□ -0.35
CCNF-202ENST00000397066 TNFSF12O43508 249 aa12.85□□□□□ -0.35
CCNF-202ENST00000397066 RBP2P50120 134 aa12.85□□□□□ -0.35
CCNF-202ENST00000397066 DEFA6Q01524 100 aa12.85□□□□□ -0.35
CCNF-202ENST00000397066 TMEM187Q14656 261 aa12.85□□□□□ -0.35
CCNF-202ENST00000397066 SHBQ15464 509 aa12.85□□□□□ -0.35
CCNF-202ENST00000397066 CDCP2Q5VXM1 449 aa12.85□□□□□ -0.35
CCNF-202ENST00000397066 FBXL14Q8N1E6 418 aa12.85□□□□□ -0.35
CCNF-202ENST00000397066 PAPOLGQ9BWT3 736 aaKnown RBP12.85□□□□□ -0.35
CCNF-202ENST00000397066 IGHV1OR15-9A0A0B4J2B8 117 aa12.85□□□□□ -0.35
CCNF-202ENST00000397066 GEMIN2O14893 280 aaKnown RBP12.85□□□□□ -0.35
CCNF-202ENST00000397066 CST7O76096 145 aa12.85□□□□□ -0.35
CCNF-202ENST00000397066 CCL1P22362 96 aa12.85□□□□□ -0.35
CCNF-202ENST00000397066 TUBA4BQ9H853 241 aa12.85□□□□□ -0.35
CCNF-202ENST00000397066 LMAN1LQ9HAT1 526 aa12.85□□□□□ -0.35
CCNF-202ENST00000397066 PNRC2Q9NPJ4 139 aaKnown RBP12.85□□□□□ -0.35
CCNF-202ENST00000397066 RBFOX3A6NFN3 312 aa12.85□□□□□ -0.35
CCNF-202ENST00000397066 ZNF724A8MTY0 619 aa12.85□□□□□ -0.35
CCNF-202ENST00000397066 DHHO43323 396 aa12.85□□□□□ -0.35
CCNF-202ENST00000397066 SCRG1O75711 98 aa12.85□□□□□ -0.35
CCNF-202ENST00000397066 NKX6-1P78426 367 aaPredicted RBP12.85□□□□□ -0.35
CCNF-202ENST00000397066 EWSR1Q01844 656 aaKnown RBP eCLIP12.85□□□□□ -0.35
CCNF-202ENST00000397066 OR2C3Q8N628 320 aa12.85□□□□□ -0.35
CCNF-202ENST00000397066 GINS3Q9BRX5 216 aa12.85□□□□□ -0.35
CCNF-202ENST00000397066 EGLN1Q9GZT9 426 aa12.85□□□□□ -0.35
CCNF-202ENST00000397066 MYOTQ9UBF9 498 aa12.85□□□□□ -0.35
CCNF-202ENST00000397066 DKKL1Q9UK85 242 aa12.85□□□□□ -0.35
CCNF-202ENST00000397066 ST3GAL6Q9Y274 331 aa12.85□□□□□ -0.35
CCNF-202ENST00000397066 RALGAPA1Q6GYQ0 2036 aa12.85□□□□□ -0.35
CCNF-202ENST00000397066 JMJD7P0C870 316 aa12.85□□□□□ -0.35
CCNF-202ENST00000397066 NOVA1P51513 510 aaKnown RBP12.85□□□□□ -0.35
CCNF-202ENST00000397066 PIGYQ3MUY2 71 aa12.85□□□□□ -0.35
CCNF-202ENST00000397066 NSUN5P2Q63ZY6 315 aa12.85□□□□□ -0.35
CCNF-202ENST00000397066 PIGCQ92535 297 aa12.85□□□□□ -0.35
CCNF-202ENST00000397066 Q96M66 194 aa12.85□□□□□ -0.35
CCNF-202ENST00000397066 NIPSNAP3BQ9BS92 247 aa12.85□□□□□ -0.35
CCNF-202ENST00000397066 GAR1Q9NY12 217 aaKnown RBP12.85□□□□□ -0.35
CCNF-202ENST00000397066 HDGFL3Q9Y3E1 203 aa12.85□□□□□ -0.35
CCNF-202ENST00000397066 ADAM10O14672 748 aa12.84□□□□□ -0.35
CCNF-202ENST00000397066 SLC35G3Q8N808 338 aa12.84□□□□□ -0.35
CCNF-202ENST00000397066 ZNF501Q96CX3 271 aaPredicted RBP12.84□□□□□ -0.35
CCNF-202ENST00000397066 TAAR9Q96RI9 348 aa12.84□□□□□ -0.35
CCNF-202ENST00000397066 TM2D1Q9BX74 207 aa12.84□□□□□ -0.35
CCNF-202ENST00000397066 CHRNA10Q9GZZ6 450 aa12.84□□□□□ -0.35
CCNF-202ENST00000397066 SLC25A31Q9H0C2 315 aa12.84□□□□□ -0.35
CCNF-202ENST00000397066 BCO1Q9HAY6 547 aa12.84□□□□□ -0.35
CCNF-202ENST00000397066 LIPGQ9Y5X9 500 aa12.84□□□□□ -0.35
CCNF-202ENST00000397066 AQP7P3A6NL99 342 aa12.84□□□□□ -0.35
CCNF-202ENST00000397066 FAM157AC9JC47 383 aa12.84□□□□□ -0.35
CCNF-202ENST00000397066 H3BQ15 152 aa12.84□□□□□ -0.35
CCNF-202ENST00000397066 LSM6P62312 80 aaKnown RBP12.84□□□□□ -0.35
CCNF-202ENST00000397066 HGFACQ04756 655 aa12.84□□□□□ -0.35
CCNF-202ENST00000397066 CYB5BO43169 146 aa12.84□□□□□ -0.35
CCNF-202ENST00000397066 PLCXD3Q63HM9 321 aa12.84□□□□□ -0.35
CCNF-202ENST00000397066 ZNF429Q86V71 674 aa12.84□□□□□ -0.35
CCNF-202ENST00000397066 MR1Q95460 341 aa12.84□□□□□ -0.35
CCNF-202ENST00000397066 GGACTQ9BVM4 153 aa12.84□□□□□ -0.35
CCNF-202ENST00000397066 ZNF581Q9P0T4 197 aa12.84□□□□□ -0.35
CCNF-202ENST00000397066 THADAQ6YHU6 1953 aa12.83□□□□□ -0.35
CCNF-202ENST00000397066 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.83□□□□□ -0.36
CCNF-202ENST00000397066 RPL23AP62750 156 aaKnown RBP12.83□□□□□ -0.36
CCNF-202ENST00000397066 SNAI3Q3KNW1 292 aa12.83□□□□□ -0.36
CCNF-202ENST00000397066 GNRHR2Q96P88 292 aa12.83□□□□□ -0.36
CCNF-202ENST00000397066 ZNF385AQ96PM9 386 aaKnown RBP12.83□□□□□ -0.36
CCNF-202ENST00000397066 SPIN2AQ99865 258 aa12.83□□□□□ -0.36
CCNF-202ENST00000397066 SPIN2BQ9BPZ2 258 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms