RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 CCDC54Q8NEL0 328 aa6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 OR4M1Q8NGD0 313 aa6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 OR51A2Q8NGJ7 313 aa6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 ZNF418Q8TF45 676 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 TMEM158Q8WZ71 300 aa6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 TAF15Q92804 592 aaKnown RBP eCLIP6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 EMG1Q92979 244 aaKnown RBP6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 LHX4Q969G2 390 aa6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 ITFG2Q969R8 447 aa6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 C10orf35Q96D05 121 aa6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 SDSLQ96GA7 329 aa6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 CEP19Q96LK0 163 aa6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 DCTN5Q9BTE1 182 aa6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 MS4A7Q9GZW8 240 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 COMMD4Q9H0A8 199 aa6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 CNTD2Q9H8S5 307 aa6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 SIRT7Q9NRC8 400 aa6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 C19orf12Q9NSK7 152 aa6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 PAK1IP1Q9NWT1 392 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 BABAM2Q9NXR7 383 aa6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 PSORS1C1Q9UIG5 152 aa6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 CAB39Q9Y376 341 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 EXOSC1Q9Y3B2 195 aaKnown RBP6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 PCDHGB5Q9Y5G0 923 aa6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 HSPE1-MOB4S4R3N1 261 aa6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 CENPVL3A0A0U1RRI6 287 aa6.31□□□□□ -1.4
HMGB3P1-201ENST00000393368 A0A1W2PPK0 400 aa6.31□□□□□ -1.4
HMGB3P1-201ENST00000393368 A0A1W2PQ09 198 aa6.31□□□□□ -1.4
HMGB3P1-201ENST00000393368 IRGMA1A4Y4 181 aa6.31□□□□□ -1.4
HMGB3P1-201ENST00000393368 EFCAB10A6NFE3 127 aa6.31□□□□□ -1.4
HMGB3P1-201ENST00000393368 PTGES3LE9PB15 166 aa6.31□□□□□ -1.4
HMGB3P1-201ENST00000393368 SLC1A7O00341 560 aa6.31□□□□□ -1.4
HMGB3P1-201ENST00000393368 ATP6V1G2O95670 118 aa6.31□□□□□ -1.4
HMGB3P1-201ENST00000393368 ECDO95905 644 aaPredicted RBP6.31□□□□□ -1.4
HMGB3P1-201ENST00000393368 HCKP08631 526 aa6.31□□□□□ -1.4
HMGB3P1-201ENST00000393368 RPSAP08865 295 aaKnown RBP6.31□□□□□ -1.4
HMGB3P1-201ENST00000393368 ATP1B3P54709 279 aa6.31□□□□□ -1.4
HMGB3P1-201ENST00000393368 HILS1P60008 231 aa6.31□□□□□ -1.4
HMGB3P1-201ENST00000393368 ERVFRD-1P60508 538 aa6.31□□□□□ -1.4
HMGB3P1-201ENST00000393368 COL10A1Q03692 680 aa6.31□□□□□ -1.4
HMGB3P1-201ENST00000393368 MRPL28Q13084 256 aaKnown RBP6.31□□□□□ -1.4
HMGB3P1-201ENST00000393368 SCGB2A2Q13296 93 aa6.31□□□□□ -1.4
HMGB3P1-201ENST00000393368 DEFB112Q30KQ8 113 aa6.31□□□□□ -1.4
HMGB3P1-201ENST00000393368 RPL22L1Q6P5R6 122 aaKnown RBP6.31□□□□□ -1.4
HMGB3P1-201ENST00000393368 IZUMO2Q6UXV1 221 aa6.31□□□□□ -1.4
HMGB3P1-201ENST00000393368 LHFPL2Q6ZUX7 228 aa6.31□□□□□ -1.4
HMGB3P1-201ENST00000393368 UTS2BQ765I0 119 aa6.31□□□□□ -1.4
HMGB3P1-201ENST00000393368 EGFL6Q8IUX8 553 aa6.31□□□□□ -1.4
HMGB3P1-201ENST00000393368 STX19Q8N4C7 294 aa6.31□□□□□ -1.4
HMGB3P1-201ENST00000393368 Q8N7P7 452 aa6.31□□□□□ -1.4
HMGB3P1-201ENST00000393368 ASCC1Q8N9N2 400 aaKnown RBP6.31□□□□□ -1.4
HMGB3P1-201ENST00000393368 ZNF485Q8NCK3 441 aa6.31□□□□□ -1.4
HMGB3P1-201ENST00000393368 OR52N1Q8NH53 320 aa6.31□□□□□ -1.4
HMGB3P1-201ENST00000393368 GHSRQ92847 366 aa6.31□□□□□ -1.4
HMGB3P1-201ENST00000393368 SPSB1Q96BD6 273 aa6.31□□□□□ -1.4
HMGB3P1-201ENST00000393368 MED30Q96HR3 178 aa6.31□□□□□ -1.4
HMGB3P1-201ENST00000393368 C1orf147Q96MC9 270 aaPredicted RBP6.31□□□□□ -1.4
HMGB3P1-201ENST00000393368 MYCBPQ99417 103 aaPredicted RBP6.31□□□□□ -1.4
HMGB3P1-201ENST00000393368 SUCNR1Q9BXA5 334 aa6.31□□□□□ -1.4
HMGB3P1-201ENST00000393368 CHST6Q9GZX3 395 aa6.31□□□□□ -1.4
HMGB3P1-201ENST00000393368 DNTTIP1Q9H147 329 aa6.31□□□□□ -1.4
HMGB3P1-201ENST00000393368 ZCCHC4Q9H5U6 513 aa6.31□□□□□ -1.4
HMGB3P1-201ENST00000393368 NEK6Q9HC98 313 aa6.31□□□□□ -1.4
HMGB3P1-201ENST00000393368 TNFRSF19Q9NS68 423 aa6.31□□□□□ -1.4
HMGB3P1-201ENST00000393368 FKBP14Q9NWM8 211 aa6.31□□□□□ -1.4
HMGB3P1-201ENST00000393368 CHCHD3Q9NX63 227 aaKnown RBP6.31□□□□□ -1.4
HMGB3P1-201ENST00000393368 RASL12Q9NYN1 266 aa6.31□□□□□ -1.4
HMGB3P1-201ENST00000393368 CNOT2Q9NZN8 540 aaKnown RBP6.31□□□□□ -1.4
HMGB3P1-201ENST00000393368 A0A0U1RQK1 487 aa6.3□□□□□ -1.4
HMGB3P1-201ENST00000393368 TMEM82A0PJX8 343 aa6.3□□□□□ -1.4
HMGB3P1-201ENST00000393368 MAGEA13PA6NCF6 341 aa6.3□□□□□ -1.4
HMGB3P1-201ENST00000393368 DNAJC9-AS1A6NH13 148 aa6.3□□□□□ -1.4
HMGB3P1-201ENST00000393368 SIRPB1O00241 398 aa6.3□□□□□ -1.4
HMGB3P1-201ENST00000393368 MYL12BO14950 172 aa6.3□□□□□ -1.4
HMGB3P1-201ENST00000393368 OGG1O15527 345 aa6.3□□□□□ -1.4
HMGB3P1-201ENST00000393368 SULT1B1O43704 296 aa6.3□□□□□ -1.4
HMGB3P1-201ENST00000393368 HAND1O96004 215 aa6.3□□□□□ -1.4
HMGB3P1-201ENST00000393368 KNG1P01042 644 aa6.3□□□□□ -1.4
HMGB3P1-201ENST00000393368 LIPFP07098 398 aa6.3□□□□□ -1.4
HMGB3P1-201ENST00000393368 CCL3L1P16619 93 aa6.3□□□□□ -1.4
HMGB3P1-201ENST00000393368 PRKACAP17612 351 aa6.3□□□□□ -1.4
HMGB3P1-201ENST00000393368 PRKACBP22694 351 aa6.3□□□□□ -1.4
HMGB3P1-201ENST00000393368 FPR2P25090 351 aa6.3□□□□□ -1.4
HMGB3P1-201ENST00000393368 ZP1P60852 638 aa6.3□□□□□ -1.4
HMGB3P1-201ENST00000393368 RPS11P62280 158 aaKnown RBP eCLIP6.3□□□□□ -1.4
HMGB3P1-201ENST00000393368 PDZK1IP1Q13113 114 aa6.3□□□□□ -1.4
HMGB3P1-201ENST00000393368 BAMBIQ13145 260 aa6.3□□□□□ -1.4
HMGB3P1-201ENST00000393368 EDDM3AQ14507 147 aa6.3□□□□□ -1.4
HMGB3P1-201ENST00000393368 ZNF273Q14593 569 aa6.3□□□□□ -1.4
HMGB3P1-201ENST00000393368 PDCD1Q15116 288 aa6.3□□□□□ -1.4
HMGB3P1-201ENST00000393368 KISS1Q15726 138 aa6.3□□□□□ -1.4
HMGB3P1-201ENST00000393368 CCDC58Q4VC31 144 aa6.3□□□□□ -1.4
HMGB3P1-201ENST00000393368 C6orf141Q5SZD1 244 aa6.3□□□□□ -1.4
HMGB3P1-201ENST00000393368 GPR157Q5UAW9 335 aa6.3□□□□□ -1.4
HMGB3P1-201ENST00000393368 DMKNQ6E0U4 476 aaPredicted RBP6.3□□□□□ -1.4
HMGB3P1-201ENST00000393368 SATL1Q86VE3 508 aa6.3□□□□□ -1.4
HMGB3P1-201ENST00000393368 SERPINA12Q8IW75 414 aa6.3□□□□□ -1.4
HMGB3P1-201ENST00000393368 PARP16Q8N5Y8 322 aa6.3□□□□□ -1.4
HMGB3P1-201ENST00000393368 TPRX1Q8N7U7 411 aa6.3□□□□□ -1.4
HMGB3P1-201ENST00000393368 DNAAF1Q8NEP3 725 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms