RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 RPS19P39019 145 aaKnown RBP11.09□□□□□ -0.63
USP44-202ENST00000393091 RAB11BQ15907 218 aa11.09□□□□□ -0.63
USP44-202ENST00000393091 Q5PR19 223 aa11.09□□□□□ -0.63
USP44-202ENST00000393091 SLC25A26Q70HW3 274 aa11.09□□□□□ -0.63
USP44-202ENST00000393091 ANGPTL5Q86XS5 388 aa11.09□□□□□ -0.63
USP44-202ENST00000393091 FAM58AQ8N1B3 248 aa11.09□□□□□ -0.63
USP44-202ENST00000393091 SPTAN1Q13813 2472 aaKnown RBP11.09□□□□□ -0.63
USP44-202ENST00000393091 CACNA1DQ01668 2161 aa11.09□□□□□ -0.63
USP44-202ENST00000393091 A0A0A6YYH2 397 aa11.08□□□□□ -0.64
USP44-202ENST00000393091 A6NJ64 397 aa11.08□□□□□ -0.64
USP44-202ENST00000393091 IGHV2-5P01817 119 aa11.08□□□□□ -0.64
USP44-202ENST00000393091 BCL3P20749 454 aa11.08□□□□□ -0.64
USP44-202ENST00000393091 ERP29P30040 261 aaKnown RBP11.08□□□□□ -0.64
USP44-202ENST00000393091 KCNJ3P48549 501 aa11.08□□□□□ -0.64
USP44-202ENST00000393091 CAV3P56539 151 aa11.08□□□□□ -0.64
USP44-202ENST00000393091 LMO4P61968 165 aa11.08□□□□□ -0.64
USP44-202ENST00000393091 PEG10Q86TG7 708 aaKnown RBP11.08□□□□□ -0.64
USP44-202ENST00000393091 KCNG3Q8TAE7 436 aa11.08□□□□□ -0.64
USP44-202ENST00000393091 TRMT10AQ8TBZ6 339 aaKnown RBP11.08□□□□□ -0.64
USP44-202ENST00000393091 NAA50Q9GZZ1 169 aaKnown RBP11.08□□□□□ -0.64
USP44-202ENST00000393091 PATZ1Q9HBE1 687 aaKnown RBP11.08□□□□□ -0.64
USP44-202ENST00000393091 IGKV1D-17A0A075B6S4 117 aa11.08□□□□□ -0.64
USP44-202ENST00000393091 SIGLEC5O15389 551 aa11.08□□□□□ -0.64
USP44-202ENST00000393091 WNT2P09544 360 aa11.08□□□□□ -0.64
USP44-202ENST00000393091 GPR6P46095 362 aaPredicted RBP11.08□□□□□ -0.64
USP44-202ENST00000393091 RBM11P57052 281 aaKnown RBP11.08□□□□□ -0.64
USP44-202ENST00000393091 RPS27AP62979 156 aaKnown RBP11.08□□□□□ -0.64
USP44-202ENST00000393091 ZNF826PQ6ZT77 177 aa11.08□□□□□ -0.64
USP44-202ENST00000393091 TNFAIP8L1Q8WVP5 186 aa11.08□□□□□ -0.64
USP44-202ENST00000393091 PERPQ96FX8 193 aa11.08□□□□□ -0.64
USP44-202ENST00000393091 DSCAML1Q8TD84 2053 aa11.08□□□□□ -0.64
USP44-202ENST00000393091 A0A075B6Q4 140 aa11.08□□□□□ -0.64
USP44-202ENST00000393091 CYB5R3P00387 301 aaPredicted RBP11.08□□□□□ -0.64
USP44-202ENST00000393091 FOSL1P15407 271 aa11.08□□□□□ -0.64
USP44-202ENST00000393091 FIP1L1Q6UN15 594 aaKnown RBP11.08□□□□□ -0.64
USP44-202ENST00000393091 SLAMF9Q96A28 289 aa11.08□□□□□ -0.64
USP44-202ENST00000393091 DGCR14Q96DF8 476 aaKnown RBP11.08□□□□□ -0.64
USP44-202ENST00000393091 MED30Q96HR3 178 aa11.08□□□□□ -0.64
USP44-202ENST00000393091 GAFA1Q96PS6 74 aa11.08□□□□□ -0.64
USP44-202ENST00000393091 TMEM246Q9BRR3 403 aa11.08□□□□□ -0.64
USP44-202ENST00000393091 HSF4Q9ULV5 492 aa11.08□□□□□ -0.64
USP44-202ENST00000393091 A0A1W2PPK0 400 aa11.07□□□□□ -0.64
USP44-202ENST00000393091 SSX4O60224 188 aa11.07□□□□□ -0.64
USP44-202ENST00000393091 CA11O75493 328 aa11.07□□□□□ -0.64
USP44-202ENST00000393091 SCGNO76038 276 aa11.07□□□□□ -0.64
USP44-202ENST00000393091 SFTPBP07988 381 aa11.07□□□□□ -0.64
USP44-202ENST00000393091 CHRM2P08172 466 aa11.07□□□□□ -0.64
USP44-202ENST00000393091 VSIG8P0DPA2 414 aa11.07□□□□□ -0.64
USP44-202ENST00000393091 PSG2P11465 335 aa11.07□□□□□ -0.64
USP44-202ENST00000393091 MNDAP41218 407 aa11.07□□□□□ -0.64
USP44-202ENST00000393091 UNC119Q13432 240 aa11.07□□□□□ -0.64
USP44-202ENST00000393091 CR1LQ2VPA4 569 aa11.07□□□□□ -0.64
USP44-202ENST00000393091 OSR2Q8N2R0 312 aa11.07□□□□□ -0.64
USP44-202ENST00000393091 BARHL1Q9BZE3 327 aa11.07□□□□□ -0.64
USP44-202ENST00000393091 ABCG5Q9H222 651 aa11.07□□□□□ -0.64
USP44-202ENST00000393091 RNF167Q9H6Y7 350 aa11.07□□□□□ -0.64
USP44-202ENST00000393091 RSL24D1Q9UHA3 163 aaKnown RBP11.07□□□□□ -0.64
USP44-202ENST00000393091 RAB22AQ9UL26 194 aa11.07□□□□□ -0.64
USP44-202ENST00000393091 H3BSH0 61 aa11.07□□□□□ -0.64
USP44-202ENST00000393091 ZNF737O75373 536 aa11.07□□□□□ -0.64
USP44-202ENST00000393091 PAX2Q02962 417 aa11.07□□□□□ -0.64
USP44-202ENST00000393091 MICBQ29980 383 aa11.07□□□□□ -0.64
USP44-202ENST00000393091 GLIPR1L1Q6UWM5 242 aa11.07□□□□□ -0.64
USP44-202ENST00000393091 CLVS1Q8IUQ0 354 aaPredicted RBP11.07□□□□□ -0.64
USP44-202ENST00000393091 CST11Q9H112 138 aa11.07□□□□□ -0.64
USP44-202ENST00000393091 SPATA2Q9UM82 520 aa11.07□□□□□ -0.64
USP44-202ENST00000393091 AK6Q9Y3D8 172 aaKnown RBP11.07□□□□□ -0.64
USP44-202ENST00000393091 ANKRD17O75179 2603 aaKnown RBP11.07□□□□□ -0.64
USP44-202ENST00000393091 IGHV4-30-2A0A087WSY4 118 aa11.06□□□□□ -0.64
USP44-202ENST00000393091 KIAA1324LA8MWY0 1029 aaPredicted RBP11.06□□□□□ -0.64
USP44-202ENST00000393091 F8VVB4 439 aa11.06□□□□□ -0.64
USP44-202ENST00000393091 F8VWA3 439 aa11.06□□□□□ -0.64
USP44-202ENST00000393091 CDC14BO60729 498 aa11.06□□□□□ -0.64
USP44-202ENST00000393091 CDRT1O95170 752 aa11.06□□□□□ -0.64
USP44-202ENST00000393091 AMY2BP19961 511 aa11.06□□□□□ -0.64
USP44-202ENST00000393091 GLRA1P23415 457 aa11.06□□□□□ -0.64
USP44-202ENST00000393091 NPBWR2P48146 333 aa11.06□□□□□ -0.64
USP44-202ENST00000393091 NCS1P62166 190 aa11.06□□□□□ -0.64
USP44-202ENST00000393091 LINC00299Q6ZSB3 139 aa11.06□□□□□ -0.64
USP44-202ENST00000393091 LY6G5BQ8NDX9 201 aa11.06□□□□□ -0.64
USP44-202ENST00000393091 CCL17Q92583 94 aa11.06□□□□□ -0.64
USP44-202ENST00000393091 FAM3DQ96BQ1 224 aa11.06□□□□□ -0.64
USP44-202ENST00000393091 BAHCC1Q9P281 2608 aa11.06□□□□□ -0.64
USP44-202ENST00000393091 OR2AT4A6NND4 320 aa11.06□□□□□ -0.64
USP44-202ENST00000393091 SPRY1O43609 319 aaPredicted RBP11.06□□□□□ -0.64
USP44-202ENST00000393091 ZNF182P17025 639 aaPredicted RBP11.06□□□□□ -0.64
USP44-202ENST00000393091 OR10A3P58181 314 aa11.06□□□□□ -0.64
USP44-202ENST00000393091 VBP1P61758 197 aa11.06□□□□□ -0.64
USP44-202ENST00000393091 P2RY14Q15391 338 aa11.06□□□□□ -0.64
USP44-202ENST00000393091 CD177Q8N6Q3 437 aa11.06□□□□□ -0.64
USP44-202ENST00000393091 ZNF665Q9H7R5 613 aa11.06□□□□□ -0.64
USP44-202ENST00000393091 DCAF16Q9NXF7 216 aa11.06□□□□□ -0.64
USP44-202ENST00000393091 GLS2Q9UI32 602 aa11.06□□□□□ -0.64
USP44-202ENST00000393091 LOC100506127A0A0U1RQW1 187 aa11.06□□□□□ -0.64
USP44-202ENST00000393091 ECDO95905 644 aaPredicted RBP11.06□□□□□ -0.64
USP44-202ENST00000393091 TMEM225BP0DP42 221 aa11.06□□□□□ -0.64
USP44-202ENST00000393091 GTF2F2P13984 249 aa11.06□□□□□ -0.64
USP44-202ENST00000393091 RORCP51449 518 aa11.06□□□□□ -0.64
USP44-202ENST00000393091 SPCS2Q15005 226 aa11.06□□□□□ -0.64
USP44-202ENST00000393091 SRSF7Q16629 238 aaKnown RBP eCLIP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms