RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 RASD2Q96D21 266 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 MRPS24Q96EL2 167 aaKnown RBP0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 JSRP1Q96MG2 331 aaPredicted RBP0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 OR52B2Q96RD2 323 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 TGS1Q96RS0 853 aaKnown RBP0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 NUP58Q9BVL2 599 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 SPZ1Q9BXG8 430 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 REEP1Q9H902 201 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 CCNB1IP1Q9NPC3 277 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 ACP6Q9NPH0 428 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 PRSS16Q9NQE7 514 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 ZC4H2Q9NQZ6 224 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 TMEM100Q9NV29 134 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 BABAM2Q9NXR7 383 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 PTTG3PQ9NZH4 202 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 BLOC1S6Q9UL45 172 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 RCL1Q9Y2P8 373 aaKnown RBP0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 INSIG2Q9Y5U4 225 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 U3KQK5 164 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 ZNF608Q9ULD9 1512 aaPredicted RBP0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 CRB1P82279 1406 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 KBTBD11-OT1A0A1B0GTJ5 212 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 A0A1W2PRD5 423 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 SLC22A20A6NK97 555 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 C17orf98A8MV24 154 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 A8MWP4 228 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 UPK2O00526 184 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 ISLRO14498 428 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 CXCL11O14625 94 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 EIF3HO15372 352 aaKnown RBP eCLIP0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 ERI3O43414 337 aaKnown RBP0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 CACNG3O60359 315 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 COX7A2P2O60397 106 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 SH2D1AO60880 128 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 MPDU1O75352 247 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 HSBP1O75506 76 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 ZNF189O75820 626 aaPredicted RBP0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 TDP2O95551 362 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 CD160O95971 181 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 PDYNP01213 254 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 GYPCP04921 128 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 OR12D1P0DN82 309 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 PSKH1P11801 424 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 GABRG2P18507 467 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 MAGEA1P43355 309 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 SERPINB8P50452 374 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 RPL18AQ02543 176 aaKnown RBP0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 ANKDD1AQ495B1 522 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 CDNFQ49AH0 187 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 BEX5Q5H9J7 111 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 IDNKQ5T6J7 187 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 CARD17Q5XLA6 110 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 LRRC66Q68CR7 880 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 KDM4DQ6B0I6 523 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 UGT2A3Q6UWM9 527 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 CLEC19AQ6UXS0 136 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 CYHR1Q6ZMK1 362 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 TAS2R42Q7RTR8 314 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 DPPA2Q7Z7J5 298 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 LINC00596Q86U02 117 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 GABRG1Q8N1C3 465 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 CYP4Z2PQ8N1L4 340 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 OR5AR1Q8NGP9 310 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 OR51F2Q8NH61 342 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 AKR7LQ8NHP1 331 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 FAM81AQ8TBF8 368 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 HIST1H2BAQ96A08 127 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 MCUR1Q96AQ8 359 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 SMIM8Q96KF7 97 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 C9orf72Q96LT7 481 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 GLT1D1Q96MS3 346 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 TSGA13Q96PP4 275 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 MTG1Q9BT17 334 aaPredicted RBP0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 NT5C3AQ9H0P0 336 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 CLSTN2Q9H4D0 955 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 SDHAF3Q9NRP4 125 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 C14orf166Q9Y224 244 aaKnown RBP0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 ORC6Q9Y5N6 252 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 FBN2P35556 2912 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 OTOFQ9HC10 1997 aa0.23□□□□□ -2.37
SNORD28B-201ENST00000390993 KMT2EQ8IZD2 1858 aa0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 SDK1Q7Z5N4 2213 aa0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 NINLQ9Y2I6 1382 aa0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 SIGLEC1Q9BZZ2 1709 aa0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 MROH7Q68CQ1 1323 aa0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 MDC1Q14676 2089 aaKnown RBP0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 IGLV3-9A0A075B6K5 115 aa0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 IGKV1D-37A0A075B6S9 117 aa0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 ODF3BA8MYP8 253 aa0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 HACD1B0YJ81 288 aa0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 RALBP11234 206 aa0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 STOMP27105 288 aa0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 IL12BP29460 328 aa0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 GABRA4P48169 554 aa0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 HINT1P49773 126 aaPredicted RBP0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 TAS2R39P59534 338 aa0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 KRTAP10-4P60372 401 aaPredicted RBP0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 DNAJC3Q13217 504 aa0.22□□□□□ -2.37
SNORD28B-201ENST00000390993 TMEM241Q24JQ0 296 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms