RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 SLC16A13Q7RTY0 426 aa14.15□□□□□ -0.14
NKX3-1-201ENST00000380871 SGPP2Q8IWX5 399 aa14.15□□□□□ -0.14
NKX3-1-201ENST00000380871 CHST5Q9GZS9 411 aa14.15□□□□□ -0.14
NKX3-1-201ENST00000380871 HDGFL3Q9Y3E1 203 aa14.15□□□□□ -0.14
NKX3-1-201ENST00000380871 RFNGQ9Y644 331 aa14.15□□□□□ -0.14
NKX3-1-201ENST00000380871 CRYM-AS1A6NIL9 109 aa14.14□□□□□ -0.15
NKX3-1-201ENST00000380871 P04436 131 aa14.14□□□□□ -0.15
NKX3-1-201ENST00000380871 OR5AC1P0C628 307 aa14.14□□□□□ -0.15
NKX3-1-201ENST00000380871 JMJD7P0C870 316 aa14.14□□□□□ -0.15
NKX3-1-201ENST00000380871 OR5H8P0DN80 308 aa14.14□□□□□ -0.15
NKX3-1-201ENST00000380871 ZNF84P51523 738 aa14.14□□□□□ -0.15
NKX3-1-201ENST00000380871 EXT1Q16394 746 aa14.14□□□□□ -0.15
NKX3-1-201ENST00000380871 EIF5AL1Q6IS14 154 aaKnown RBP14.14□□□□□ -0.15
NKX3-1-201ENST00000380871 LYZL2Q7Z4W2 148 aa14.14□□□□□ -0.15
NKX3-1-201ENST00000380871 FADS6Q8N9I5 356 aa14.14□□□□□ -0.15
NKX3-1-201ENST00000380871 ULBP2Q9BZM5 246 aa14.14□□□□□ -0.15
NKX3-1-201ENST00000380871 IFT22Q9H7X7 185 aa14.14□□□□□ -0.15
NKX3-1-201ENST00000380871 PROK2Q9HC23 129 aa14.14□□□□□ -0.15
NKX3-1-201ENST00000380871 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.14□□□□□ -0.15
NKX3-1-201ENST00000380871 PARP11Q9NR21 331 aa14.14□□□□□ -0.15
NKX3-1-201ENST00000380871 LOXL2Q9Y4K0 774 aa14.14□□□□□ -0.15
NKX3-1-201ENST00000380871 FAM230AA0A1W2PPH8 454 aa14.14□□□□□ -0.15
NKX3-1-201ENST00000380871 TAAR5O14804 337 aa14.14□□□□□ -0.15
NKX3-1-201ENST00000380871 CXCL13O43927 109 aa14.14□□□□□ -0.15
NKX3-1-201ENST00000380871 IGLV3-1P01715 115 aa14.14□□□□□ -0.15
NKX3-1-201ENST00000380871 MSR1P21757 451 aa14.14□□□□□ -0.15
NKX3-1-201ENST00000380871 DVL1P1P54792 670 aaPredicted RBP14.14□□□□□ -0.15
NKX3-1-201ENST00000380871 SWI5Q1ZZU3 235 aa14.14□□□□□ -0.15
NKX3-1-201ENST00000380871 TIPARPQ7Z3E1 657 aaKnown RBP14.14□□□□□ -0.15
NKX3-1-201ENST00000380871 SLC25A43Q8WUT9 341 aaPredicted RBP14.14□□□□□ -0.15
NKX3-1-201ENST00000380871 HAS2Q92819 552 aa14.14□□□□□ -0.15
NKX3-1-201ENST00000380871 ALKBH3Q96Q83 286 aaPredicted RBP14.14□□□□□ -0.15
NKX3-1-201ENST00000380871 SRXN1Q9BYN0 137 aa14.14□□□□□ -0.15
NKX3-1-201ENST00000380871 WDR54Q9H977 334 aa14.14□□□□□ -0.15
NKX3-1-201ENST00000380871 AK3Q9UIJ7 227 aa14.14□□□□□ -0.15
NKX3-1-201ENST00000380871 CCDC163A0A0D9SF12 145 aa14.14□□□□□ -0.15
NKX3-1-201ENST00000380871 PQLC2LA1A4F0 135 aa14.14□□□□□ -0.15
NKX3-1-201ENST00000380871 A6NLC8 198 aa14.14□□□□□ -0.15
NKX3-1-201ENST00000380871 NTN3O00634 580 aaPredicted RBP14.14□□□□□ -0.15
NKX3-1-201ENST00000380871 MTCP1P56278 107 aa14.14□□□□□ -0.15
NKX3-1-201ENST00000380871 ZFP36L1Q07352 338 aaKnown RBP14.14□□□□□ -0.15
NKX3-1-201ENST00000380871 KCNMB1Q16558 191 aa14.14□□□□□ -0.15
NKX3-1-201ENST00000380871 AWAT1Q58HT5 328 aa14.14□□□□□ -0.15
NKX3-1-201ENST00000380871 OR9K2Q8NGE7 335 aa14.14□□□□□ -0.15
NKX3-1-201ENST00000380871 HIST1H2BAQ96A08 127 aa14.14□□□□□ -0.15
NKX3-1-201ENST00000380871 TM2D1Q9BX74 207 aa14.14□□□□□ -0.15
NKX3-1-201ENST00000380871 V9GYS6 101 aa14.14□□□□□ -0.15
NKX3-1-201ENST00000380871 IGKV1-27A0A075B6S5 117 aa14.13□□□□□ -0.15
NKX3-1-201ENST00000380871 DKK1O94907 266 aa14.13□□□□□ -0.15
NKX3-1-201ENST00000380871 DCAF12Q5T6F0 453 aa14.13□□□□□ -0.15
NKX3-1-201ENST00000380871 SLC16A14Q7RTX9 510 aa14.13□□□□□ -0.15
NKX3-1-201ENST00000380871 NANPQ8TBE9 248 aa14.13□□□□□ -0.15
NKX3-1-201ENST00000380871 NABP1Q96AH0 204 aa14.13□□□□□ -0.15
NKX3-1-201ENST00000380871 ANXA10Q9UJ72 324 aa14.13□□□□□ -0.15
NKX3-1-201ENST00000380871 ZNF850A8MQ14 1090 aa14.13□□□□□ -0.15
NKX3-1-201ENST00000380871 M0R135 149 aa14.13□□□□□ -0.15
NKX3-1-201ENST00000380871 ZNF44P15621 663 aa14.13□□□□□ -0.15
NKX3-1-201ENST00000380871 SMCO1Q147U7 214 aa14.13□□□□□ -0.15
NKX3-1-201ENST00000380871 ADPRHL1Q8NDY3 354 aa14.13□□□□□ -0.15
NKX3-1-201ENST00000380871 OR52M1Q8NGK5 317 aa14.13□□□□□ -0.15
NKX3-1-201ENST00000380871 OR5L1Q8NGL2 311 aa14.13□□□□□ -0.15
NKX3-1-201ENST00000380871 OR11L1Q8NGX0 322 aa14.13□□□□□ -0.15
NKX3-1-201ENST00000380871 ZNF799Q96GE5 643 aa14.13□□□□□ -0.15
NKX3-1-201ENST00000380871 Q96M66 194 aa14.13□□□□□ -0.15
NKX3-1-201ENST00000380871 ZNF700Q9H0M5 742 aa14.13□□□□□ -0.15
NKX3-1-201ENST00000380871 SMCO4Q9NRQ5 59 aa14.13□□□□□ -0.15
NKX3-1-201ENST00000380871 TUBD1Q9UJT1 453 aa14.13□□□□□ -0.15
NKX3-1-201ENST00000380871 ZDHHC8Q9ULC8 765 aa14.13□□□□□ -0.15
NKX3-1-201ENST00000380871 DOCK7Q96N67 2140 aa14.13□□□□□ -0.15
NKX3-1-201ENST00000380871 JTBO76095 146 aa14.12□□□□□ -0.15
NKX3-1-201ENST00000380871 TSPAN15O95858 294 aa14.12□□□□□ -0.15
NKX3-1-201ENST00000380871 CD63P08962 238 aa14.12□□□□□ -0.15
NKX3-1-201ENST00000380871 ALDH3B1P43353 468 aa14.12□□□□□ -0.15
NKX3-1-201ENST00000380871 Q0VFX4 171 aa14.12□□□□□ -0.15
NKX3-1-201ENST00000380871 SPINK14Q6IE38 97 aa14.12□□□□□ -0.15
NKX3-1-201ENST00000380871 NELFAQ9H3P2 528 aa14.12□□□□□ -0.15
NKX3-1-201ENST00000380871 hCG_1809904A0A1W2PP81 198 aa14.12□□□□□ -0.15
NKX3-1-201ENST00000380871 A0A1W2PPH5 198 aa14.12□□□□□ -0.15
NKX3-1-201ENST00000380871 A0A1W2PR64 198 aa14.12□□□□□ -0.15
NKX3-1-201ENST00000380871 A0A1W2PRV1 198 aa14.12□□□□□ -0.15
NKX3-1-201ENST00000380871 EIF5AP63241 154 aaKnown RBP14.12□□□□□ -0.15
NKX3-1-201ENST00000380871 SURF2Q15527 256 aaPredicted RBP14.12□□□□□ -0.15
NKX3-1-201ENST00000380871 PIGYQ3MUY2 71 aa14.12□□□□□ -0.15
NKX3-1-201ENST00000380871 CT55Q8WUE5 264 aa14.12□□□□□ -0.15
NKX3-1-201ENST00000380871 EDARQ9UNE0 448 aa14.12□□□□□ -0.15
NKX3-1-201ENST00000380871 RCL1Q9Y2P8 373 aaKnown RBP14.12□□□□□ -0.15
NKX3-1-201ENST00000380871 DNAJC13O75165 2243 aa14.12□□□□□ -0.15
NKX3-1-201ENST00000380871 LOC102723996A0A087X1L8 192 aa14.12□□□□□ -0.15
NKX3-1-201ENST00000380871 IGLV3-32A0A0A0MS00 114 aa14.12□□□□□ -0.15
NKX3-1-201ENST00000380871 IFNA21P01568 189 aa14.12□□□□□ -0.15
NKX3-1-201ENST00000380871 CTSDP07339 412 aaPredicted RBP14.12□□□□□ -0.15
NKX3-1-201ENST00000380871 DSCR4P56555 118 aaPredicted RBP14.12□□□□□ -0.15
NKX3-1-201ENST00000380871 KRBOX4Q5JUW0 171 aa14.12□□□□□ -0.15
NKX3-1-201ENST00000380871 C5orf24Q7Z6I8 188 aa14.12□□□□□ -0.15
NKX3-1-201ENST00000380871 HSD17B11Q8NBQ5 300 aa14.12□□□□□ -0.15
NKX3-1-201ENST00000380871 GJC3Q8NFK1 279 aa14.12□□□□□ -0.15
NKX3-1-201ENST00000380871 SGK3Q96BR1 496 aa14.12□□□□□ -0.15
NKX3-1-201ENST00000380871 ANGPTL4Q9BY76 406 aa14.12□□□□□ -0.15
NKX3-1-201ENST00000380871 SPACA1Q9HBV2 294 aa14.12□□□□□ -0.15
NKX3-1-201ENST00000380871 ATPIF1Q9UII2 106 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms