RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 MKXQ8IYA7 352 aa20.16■□□□□ 0.82
TNFRSF4-201ENST00000379236 OR13C3Q8NGS6 347 aa20.16■□□□□ 0.82
TNFRSF4-201ENST00000379236 MTCH1Q9NZJ7 389 aa20.16■□□□□ 0.82
TNFRSF4-201ENST00000379236 FRRS1LQ9P0K9 344 aa20.16■□□□□ 0.82
TNFRSF4-201ENST00000379236 HHLA2Q9UM44 414 aa20.16■□□□□ 0.82
TNFRSF4-201ENST00000379236 EXOGQ9Y2C4 368 aaKnown RBP20.16■□□□□ 0.82
TNFRSF4-201ENST00000379236 IGKV1-27A0A075B6S5 117 aa20.15■□□□□ 0.82
TNFRSF4-201ENST00000379236 J3QRE1 110 aa20.15■□□□□ 0.82
TNFRSF4-201ENST00000379236 ISG15P05161 165 aa20.15■□□□□ 0.82
TNFRSF4-201ENST00000379236 AZGP1P25311 298 aaKnown RBP20.15■□□□□ 0.82
TNFRSF4-201ENST00000379236 EDDM3BP56851 147 aa20.15■□□□□ 0.82
TNFRSF4-201ENST00000379236 ERVFRD-1P60508 538 aa20.15■□□□□ 0.82
TNFRSF4-201ENST00000379236 ZNF91Q05481 1191 aa20.15■□□□□ 0.82
TNFRSF4-201ENST00000379236 TAF9Q16594 264 aa20.15■□□□□ 0.82
TNFRSF4-201ENST00000379236 FDX2Q6P4F2 183 aa20.15■□□□□ 0.82
TNFRSF4-201ENST00000379236 BRICD5Q6PL45 260 aa20.15■□□□□ 0.82
TNFRSF4-201ENST00000379236 ENTHD1Q8IYW4 607 aa20.15■□□□□ 0.82
TNFRSF4-201ENST00000379236 PQLC1Q8N2U9 271 aa20.15■□□□□ 0.82
TNFRSF4-201ENST00000379236 ZNF676Q8N7Q3 588 aa20.15■□□□□ 0.82
TNFRSF4-201ENST00000379236 DNAAF1Q8NEP3 725 aa20.15■□□□□ 0.82
TNFRSF4-201ENST00000379236 STMN2Q93045 179 aa20.15■□□□□ 0.82
TNFRSF4-201ENST00000379236 FGGYQ96C11 551 aa20.15■□□□□ 0.82
TNFRSF4-201ENST00000379236 LGALS12Q96DT0 336 aa20.15■□□□□ 0.82
TNFRSF4-201ENST00000379236 ADAT3Q96EY9 351 aaPredicted RBP20.15■□□□□ 0.82
TNFRSF4-201ENST00000379236 ALG8Q9BVK2 526 aa20.15■□□□□ 0.82
TNFRSF4-201ENST00000379236 NEK6Q9HC98 313 aa20.15■□□□□ 0.82
TNFRSF4-201ENST00000379236 AASSQ9UDR5 926 aa20.15■□□□□ 0.82
TNFRSF4-201ENST00000379236 RNF114Q9Y508 228 aa20.15■□□□□ 0.82
TNFRSF4-201ENST00000379236 K7N7A8 449 aa20.14■□□□□ 0.81
TNFRSF4-201ENST00000379236 BAG2O95816 211 aa20.14■□□□□ 0.81
TNFRSF4-201ENST00000379236 FADS2O95864 444 aaKnown RBP20.14■□□□□ 0.81
TNFRSF4-201ENST00000379236 DBTP11182 482 aaKnown RBP20.14■□□□□ 0.81
TNFRSF4-201ENST00000379236 ATF1P18846 271 aa20.14■□□□□ 0.81
TNFRSF4-201ENST00000379236 CCR9P51686 369 aa20.14■□□□□ 0.81
TNFRSF4-201ENST00000379236 MTCP1P56278 107 aa20.14■□□□□ 0.81
TNFRSF4-201ENST00000379236 LGALS4P56470 323 aa20.14■□□□□ 0.81
TNFRSF4-201ENST00000379236 LHFPL2Q6ZUX7 228 aa20.14■□□□□ 0.81
TNFRSF4-201ENST00000379236 WFDC12Q8WWY7 111 aa20.14■□□□□ 0.81
TNFRSF4-201ENST00000379236 GLS2Q9UI32 602 aa20.14■□□□□ 0.81
TNFRSF4-201ENST00000379236 LOC100130705A0A1B0GUX0 176 aa20.13■□□□□ 0.81
TNFRSF4-201ENST00000379236 CCL3L1P16619 93 aa20.13■□□□□ 0.81
TNFRSF4-201ENST00000379236 COX7A1P24310 79 aa20.13■□□□□ 0.81
TNFRSF4-201ENST00000379236 NANOS3P60323 173 aaKnown RBP20.13■□□□□ 0.81
TNFRSF4-201ENST00000379236 ZNF273Q14593 569 aa20.13■□□□□ 0.81
TNFRSF4-201ENST00000379236 UTS2BQ765I0 119 aa20.13■□□□□ 0.81
TNFRSF4-201ENST00000379236 LHFPL3Q86UP9 236 aa20.13■□□□□ 0.81
TNFRSF4-201ENST00000379236 ZSCAN4Q8NAM6 433 aaPredicted RBP20.13■□□□□ 0.81
TNFRSF4-201ENST00000379236 BEND2Q8NDZ0 799 aa20.13■□□□□ 0.81
TNFRSF4-201ENST00000379236 ZNF555Q8NEP9 628 aa20.13■□□□□ 0.81
TNFRSF4-201ENST00000379236 PELI1Q96FA3 418 aa20.13■□□□□ 0.81
TNFRSF4-201ENST00000379236 E9PQ18 207 aa20.12■□□□□ 0.81
TNFRSF4-201ENST00000379236 F8VVB4 439 aa20.12■□□□□ 0.81
TNFRSF4-201ENST00000379236 F8VWA3 439 aa20.12■□□□□ 0.81
TNFRSF4-201ENST00000379236 H3BUX3 64 aa20.12■□□□□ 0.81
TNFRSF4-201ENST00000379236 ALKBH1Q13686 389 aaKnown RBP20.12■□□□□ 0.81
TNFRSF4-201ENST00000379236 GALEQ14376 348 aa20.12■□□□□ 0.81
TNFRSF4-201ENST00000379236 SPSB1Q96BD6 273 aa20.12■□□□□ 0.81
TNFRSF4-201ENST00000379236 OPALINQ96PE5 141 aa20.12■□□□□ 0.81
TNFRSF4-201ENST00000379236 SLC29A1Q99808 456 aa20.12■□□□□ 0.81
TNFRSF4-201ENST00000379236 INPP5EQ9NRR6 644 aa20.12■□□□□ 0.81
TNFRSF4-201ENST00000379236 HAND1O96004 215 aa20.11■□□□□ 0.81
TNFRSF4-201ENST00000379236 RPSAP08865 295 aaKnown RBP20.11■□□□□ 0.81
TNFRSF4-201ENST00000379236 GABRB1P18505 474 aa20.11■□□□□ 0.81
TNFRSF4-201ENST00000379236 GABRR1P24046 479 aa20.11■□□□□ 0.81
TNFRSF4-201ENST00000379236 TGFBR2P37173 567 aa20.11■□□□□ 0.81
TNFRSF4-201ENST00000379236 RAB40BQ12829 278 aa20.11■□□□□ 0.81
TNFRSF4-201ENST00000379236 EDDM3AQ14507 147 aa20.11■□□□□ 0.81
TNFRSF4-201ENST00000379236 HCP5Q6MZN7 132 aa20.11■□□□□ 0.81
TNFRSF4-201ENST00000379236 ZNF782Q6ZMW2 699 aaPredicted RBP20.11■□□□□ 0.81
TNFRSF4-201ENST00000379236 OR8H2Q8N162 312 aa20.11■□□□□ 0.81
TNFRSF4-201ENST00000379236 FAM58AQ8N1B3 248 aa20.11■□□□□ 0.81
TNFRSF4-201ENST00000379236 SYS1Q8N2H4 156 aa20.11■□□□□ 0.81
TNFRSF4-201ENST00000379236 RNF166Q96A37 237 aaPredicted RBP20.11■□□□□ 0.81
TNFRSF4-201ENST00000379236 SNX22Q96L94 193 aa20.11■□□□□ 0.81
TNFRSF4-201ENST00000379236 SSX3Q99909 188 aa20.11■□□□□ 0.81
TNFRSF4-201ENST00000379236 COMMD4Q9H0A8 199 aa20.11■□□□□ 0.81
TNFRSF4-201ENST00000379236 AMBNQ9NP70 447 aa20.11■□□□□ 0.81
TNFRSF4-201ENST00000379236 RPL36Q9Y3U8 105 aaKnown RBP20.11■□□□□ 0.81
TNFRSF4-201ENST00000379236 PCDHGB5Q9Y5G0 923 aa20.11■□□□□ 0.81
TNFRSF4-201ENST00000379236 PRKACAP17612 351 aa20.1■□□□□ 0.81
TNFRSF4-201ENST00000379236 BCL3P20749 454 aa20.1■□□□□ 0.81
TNFRSF4-201ENST00000379236 PEX2P28328 305 aa20.1■□□□□ 0.81
TNFRSF4-201ENST00000379236 SNU13P55769 128 aaKnown RBP20.1■□□□□ 0.81
TNFRSF4-201ENST00000379236 MRPL28Q13084 256 aaKnown RBP20.1■□□□□ 0.81
TNFRSF4-201ENST00000379236 OR13C9Q8NGT0 318 aa20.1■□□□□ 0.81
TNFRSF4-201ENST00000379236 RHOXF1Q8NHV9 184 aa20.1■□□□□ 0.81
TNFRSF4-201ENST00000379236 LINC01006Q8NI28 216 aa20.1■□□□□ 0.81
TNFRSF4-201ENST00000379236 PPP1R35Q8TAP8 253 aa20.1■□□□□ 0.81
TNFRSF4-201ENST00000379236 RFT1Q96AA3 541 aa20.1■□□□□ 0.81
TNFRSF4-201ENST00000379236 RBFOX1Q9NWB1 397 aaKnown RBP20.1■□□□□ 0.81
TNFRSF4-201ENST00000379236 FAM118AQ9NWS6 357 aa20.1■□□□□ 0.81
TNFRSF4-201ENST00000379236 PKD1L1Q8TDX9 2849 aa20.09■□□□□ 0.81
TNFRSF4-201ENST00000379236 IGKV1-9A0A0C4DH69 117 aa20.09■□□□□ 0.81
TNFRSF4-201ENST00000379236 TRBV2A0A0J9YWF9 115 aa20.09■□□□□ 0.81
TNFRSF4-201ENST00000379236 CCDC159P0C7I6 412 aa20.09■□□□□ 0.81
TNFRSF4-201ENST00000379236 BMXP51813 675 aa20.09■□□□□ 0.81
TNFRSF4-201ENST00000379236 GBX2P52951 348 aaPredicted RBP20.09■□□□□ 0.81
TNFRSF4-201ENST00000379236 GRK1Q15835 563 aa20.09■□□□□ 0.81
TNFRSF4-201ENST00000379236 ZSCAN26Q16670 478 aa20.09■□□□□ 0.81
TNFRSF4-201ENST00000379236 LRRC75BQ2VPJ9 315 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms