RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 ZNF573Q86YE8 665 aa14.86□□□□□ -0.03
VARS-215ENST00000375663 ZNF808Q8N4W9 903 aaPredicted RBP14.86□□□□□ -0.03
VARS-215ENST00000375663 WDR13Q9H1Z4 485 aa14.86□□□□□ -0.03
VARS-215ENST00000375663 LAMP3Q9UQV4 416 aa14.86□□□□□ -0.03
VARS-215ENST00000375663 IGKV1D-42A0A075B6H8 117 aa14.86□□□□□ -0.03
VARS-215ENST00000375663 LOC105371267A0A1B0GV96 52 aa14.86□□□□□ -0.03
VARS-215ENST00000375663 A0A1W2PPQ1 181 aa14.86□□□□□ -0.03
VARS-215ENST00000375663 ZNF732B4DXR9 585 aa14.86□□□□□ -0.03
VARS-215ENST00000375663 SIRPB1O00241 398 aa14.86□□□□□ -0.03
VARS-215ENST00000375663 ADAM20O43506 726 aa14.86□□□□□ -0.03
VARS-215ENST00000375663 CLDN15P56746 228 aa14.86□□□□□ -0.03
VARS-215ENST00000375663 ZNF260Q3ZCT1 412 aa14.86□□□□□ -0.03
VARS-215ENST00000375663 ADPRHL1Q8NDY3 354 aa14.86□□□□□ -0.03
VARS-215ENST00000375663 RGP1Q92546 391 aaPredicted RBP14.86□□□□□ -0.03
VARS-215ENST00000375663 DOCK6Q96HP0 2047 aa14.86□□□□□ -0.03
VARS-215ENST00000375663 CD46P15529 392 aa14.85□□□□□ -0.03
VARS-215ENST00000375663 ZNF32P17041 273 aa14.85□□□□□ -0.03
VARS-215ENST00000375663 RPS4XP62701 263 aaKnown RBP14.85□□□□□ -0.03
VARS-215ENST00000375663 FZD5Q13467 585 aa14.85□□□□□ -0.03
VARS-215ENST00000375663 BAGE3Q86Y29 109 aa14.85□□□□□ -0.03
VARS-215ENST00000375663 BAGE2Q86Y30 109 aa14.85□□□□□ -0.03
VARS-215ENST00000375663 MTCH2Q9Y6C9 303 aa14.85□□□□□ -0.03
VARS-215ENST00000375663 A6NCN8 305 aa14.85□□□□□ -0.03
VARS-215ENST00000375663 AP4M1O00189 453 aa14.85□□□□□ -0.03
VARS-215ENST00000375663 RPS11P62280 158 aaKnown RBP eCLIP14.85□□□□□ -0.03
VARS-215ENST00000375663 POLR2GP62487 172 aaKnown RBP eCLIP14.85□□□□□ -0.03
VARS-215ENST00000375663 EFNB1P98172 346 aa14.85□□□□□ -0.03
VARS-215ENST00000375663 ZNF528Q3MIS6 628 aa14.85□□□□□ -0.03
VARS-215ENST00000375663 ZNF705AQ6ZN79 300 aaPredicted RBP14.85□□□□□ -0.03
VARS-215ENST00000375663 WNT2BQ93097 391 aa14.85□□□□□ -0.03
VARS-215ENST00000375663 PIPOXQ9P0Z9 390 aa14.85□□□□□ -0.03
VARS-215ENST00000375663 POLEQ07864 2286 aa14.85□□□□□ -0.03
VARS-215ENST00000375663 MFNGO00587 321 aa14.85□□□□□ -0.03
VARS-215ENST00000375663 TIMM8AO60220 97 aaPredicted RBP14.85□□□□□ -0.03
VARS-215ENST00000375663 OR10P1Q8NGE3 313 aa14.85□□□□□ -0.03
VARS-215ENST00000375663 ZNRF4Q8WWF5 429 aa14.85□□□□□ -0.03
VARS-215ENST00000375663 SLC39A7Q92504 469 aa14.85□□□□□ -0.03
VARS-215ENST00000375663 CCDC74BQ96LY2 380 aa14.85□□□□□ -0.03
VARS-215ENST00000375663 C3orf85A0A1B0GTC6 90 aa14.85□□□□□ -0.03
VARS-215ENST00000375663 PATE4P0C8F1 98 aa14.85□□□□□ -0.03
VARS-215ENST00000375663 RCC1P18754 421 aaPredicted RBP14.85□□□□□ -0.03
VARS-215ENST00000375663 SNCAP37840 140 aa14.85□□□□□ -0.03
VARS-215ENST00000375663 EDDM3AQ14507 147 aa14.85□□□□□ -0.03
VARS-215ENST00000375663 OR6S1Q8NH40 331 aa14.85□□□□□ -0.03
VARS-215ENST00000375663 RTL8AQ9BWD3 113 aa14.85□□□□□ -0.03
VARS-215ENST00000375663 PHF7Q9BWX1 381 aaPredicted RBP14.85□□□□□ -0.03
VARS-215ENST00000375663 HIPK2Q9H2X6 1198 aa14.85□□□□□ -0.03
VARS-215ENST00000375663 LIN7CQ9NUP9 197 aaKnown RBP14.85□□□□□ -0.03
VARS-215ENST00000375663 MRPL22Q9NWU5 206 aaKnown RBP14.85□□□□□ -0.03
VARS-215ENST00000375663 A0A1W2PP11 408 aa14.84□□□□□ -0.03
VARS-215ENST00000375663 MUC1P15941 1255 aaPredicted RBP14.84□□□□□ -0.03
VARS-215ENST00000375663 ZNF251Q9BRH9 671 aa14.84□□□□□ -0.03
VARS-215ENST00000375663 MENTQ9BUN1 341 aa14.84□□□□□ -0.03
VARS-215ENST00000375663 TLNRD1Q9H1K6 362 aa14.84□□□□□ -0.03
VARS-215ENST00000375663 B3GAT1Q9P2W7 334 aa14.84□□□□□ -0.03
VARS-215ENST00000375663 YBX2Q9Y2T7 364 aaKnown RBP14.84□□□□□ -0.03
VARS-215ENST00000375663 ARGFXA6NJG6 315 aa14.84□□□□□ -0.03
VARS-215ENST00000375663 C5orf67F2Z3F1 127 aa14.84□□□□□ -0.03
VARS-215ENST00000375663 PMP22Q01453 160 aa14.84□□□□□ -0.03
VARS-215ENST00000375663 MZT1Q08AG7 82 aa14.84□□□□□ -0.03
VARS-215ENST00000375663 ENDOGQ14249 297 aaKnown RBP14.84□□□□□ -0.03
VARS-215ENST00000375663 C1orf100Q5SVJ3 147 aa14.84□□□□□ -0.03
VARS-215ENST00000375663 OR13D1Q8NGV5 346 aa14.84□□□□□ -0.03
VARS-215ENST00000375663 KCNE4Q8WWG9 221 aa14.84□□□□□ -0.03
VARS-215ENST00000375663 OR5AC2Q9NZP5 309 aa14.84□□□□□ -0.03
VARS-215ENST00000375663 POLDIP2Q9Y2S7 368 aa14.84□□□□□ -0.03
VARS-215ENST00000375663 IGLV1-36A0A0B4J1U3 117 aa14.84□□□□□ -0.03
VARS-215ENST00000375663 CLEC18AA5D8T8 446 aa14.84□□□□□ -0.03
VARS-215ENST00000375663 GPM6AP51674 278 aa14.84□□□□□ -0.03
VARS-215ENST00000375663 NCMAPQ5T1S8 102 aa14.84□□□□□ -0.03
VARS-215ENST00000375663 OR2A2Q6IF42 318 aa14.84□□□□□ -0.03
VARS-215ENST00000375663 CLEC18CQ8NCF0 446 aa14.84□□□□□ -0.03
VARS-215ENST00000375663 AP1S3Q96PC3 154 aa14.84□□□□□ -0.03
VARS-215ENST00000375663 ADAM19Q9H013 955 aa14.84□□□□□ -0.03
VARS-215ENST00000375663 TP53BP1Q12888 1972 aaPredicted RBP14.83□□□□□ -0.03
VARS-215ENST00000375663 LMX1BO60663 402 aa14.83□□□□□ -0.03
VARS-215ENST00000375663 CTSBP07858 339 aa14.83□□□□□ -0.03
VARS-215ENST00000375663 IFI6P09912 130 aa14.83□□□□□ -0.03
VARS-215ENST00000375663 ZNF721Q8TF20 911 aa14.83□□□□□ -0.03
VARS-215ENST00000375663 PARP11Q9NR21 331 aa14.83□□□□□ -0.03
VARS-215ENST00000375663 OSGIN2Q9Y236 505 aa14.83□□□□□ -0.03
VARS-215ENST00000375663 CDRT15L2A8MXV6 281 aa14.83□□□□□ -0.04
VARS-215ENST00000375663 CLDN34H7C241 214 aa14.83□□□□□ -0.04
VARS-215ENST00000375663 SMIM6P0DI80 62 aa14.83□□□□□ -0.04
VARS-215ENST00000375663 FABP4P15090 132 aa14.83□□□□□ -0.04
VARS-215ENST00000375663 NOVA1P51513 510 aaKnown RBP14.83□□□□□ -0.04
VARS-215ENST00000375663 TRIM61Q5EBN2 209 aa14.83□□□□□ -0.04
VARS-215ENST00000375663 SLC36A1Q7Z2H8 476 aa14.83□□□□□ -0.04
VARS-215ENST00000375663 ACTR3CQ9C0K3 210 aaPredicted RBP14.83□□□□□ -0.04
VARS-215ENST00000375663 OR51I2Q9H344 312 aa14.83□□□□□ -0.04
VARS-215ENST00000375663 TMEM74BQ9NUR3 256 aa14.83□□□□□ -0.04
VARS-215ENST00000375663 SPINT2O43291 252 aa14.83□□□□□ -0.04
VARS-215ENST00000375663 NPBWR1P48145 328 aa14.83□□□□□ -0.04
VARS-215ENST00000375663 LIAT1Q6ZQX7 453 aa14.83□□□□□ -0.04
VARS-215ENST00000375663 OR2V1Q8NHB1 315 aa14.83□□□□□ -0.04
VARS-215ENST00000375663 IFI44Q8TCB0 444 aa14.83□□□□□ -0.04
VARS-215ENST00000375663 MSI2Q96DH6 328 aaKnown RBP14.83□□□□□ -0.04
VARS-215ENST00000375663 THOC3Q96J01 351 aaKnown RBP14.83□□□□□ -0.04
VARS-215ENST00000375663 RBFOX3A6NFN3 312 aa14.83□□□□□ -0.04
VARS-215ENST00000375663 MASP2O00187 686 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms