RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 CPEP16870 476 aa10.06□□□□□ -0.8
LSM2-208ENST00000375661 RPS25P62851 125 aaKnown RBP10.06□□□□□ -0.8
LSM2-208ENST00000375661 HOXA4Q00056 320 aaPredicted RBP10.06□□□□□ -0.8
LSM2-208ENST00000375661 RELBQ01201 579 aa10.06□□□□□ -0.8
LSM2-208ENST00000375661 SSX1Q16384 188 aa10.06□□□□□ -0.8
LSM2-208ENST00000375661 ZNF404Q494X3 552 aa10.06□□□□□ -0.8
LSM2-208ENST00000375661 Q499Y3 187 aa10.06□□□□□ -0.8
LSM2-208ENST00000375661 ZNF529Q6P280 563 aa10.06□□□□□ -0.8
LSM2-208ENST00000375661 UNQ9370/PRO34162Q6UXP9 181 aa10.06□□□□□ -0.8
LSM2-208ENST00000375661 BRD3OSQ6XYD6 125 aa10.06□□□□□ -0.8
LSM2-208ENST00000375661 KCTD8Q6ZWB6 473 aa10.06□□□□□ -0.8
LSM2-208ENST00000375661 RNF144BQ7Z419 303 aa10.06□□□□□ -0.8
LSM2-208ENST00000375661 SERPINA12Q8IW75 414 aa10.06□□□□□ -0.8
LSM2-208ENST00000375661 SCCPDHQ8NBX0 429 aa10.06□□□□□ -0.8
LSM2-208ENST00000375661 TRMT10AQ8TBZ6 339 aaKnown RBP10.06□□□□□ -0.8
LSM2-208ENST00000375661 NPRL2Q8WTW4 380 aa10.06□□□□□ -0.8
LSM2-208ENST00000375661 RPL3LQ92901 407 aaKnown RBP10.06□□□□□ -0.8
LSM2-208ENST00000375661 TMEM106AQ96A25 262 aa10.06□□□□□ -0.8
LSM2-208ENST00000375661 ORAI1Q96D31 301 aa10.06□□□□□ -0.8
LSM2-208ENST00000375661 NR1H4Q96RI1 486 aaPredicted RBP10.06□□□□□ -0.8
LSM2-208ENST00000375661 NUDT16L1Q9BRJ7 211 aaKnown RBP10.06□□□□□ -0.8
LSM2-208ENST00000375661 TMEM246Q9BRR3 403 aa10.06□□□□□ -0.8
LSM2-208ENST00000375661 CHIAQ9BZP6 476 aa10.06□□□□□ -0.8
LSM2-208ENST00000375661 FN3KRPQ9HA64 309 aa10.06□□□□□ -0.8
LSM2-208ENST00000375661 IGKV1-27A0A075B6S5 117 aa10.05□□□□□ -0.8
LSM2-208ENST00000375661 A0A087WXM4 84 aa10.05□□□□□ -0.8
LSM2-208ENST00000375661 A0A1W2PPK0 400 aa10.05□□□□□ -0.8
LSM2-208ENST00000375661 A6NLC8 198 aa10.05□□□□□ -0.8
LSM2-208ENST00000375661 TRIM64CA6NLI5 447 aa10.05□□□□□ -0.8
LSM2-208ENST00000375661 ZNF879B4DU55 563 aa10.05□□□□□ -0.8
LSM2-208ENST00000375661 CDIPTO14735 213 aa10.05□□□□□ -0.8
LSM2-208ENST00000375661 TNFRSF13BO14836 293 aaPredicted RBP10.05□□□□□ -0.8
LSM2-208ENST00000375661 PIN1P1O15428 100 aa10.05□□□□□ -0.8
LSM2-208ENST00000375661 ENSAO43768 121 aaKnown RBP10.05□□□□□ -0.8
LSM2-208ENST00000375661 SC5DO75845 299 aa10.05□□□□□ -0.8
LSM2-208ENST00000375661 ALX3O95076 343 aa10.05□□□□□ -0.8
LSM2-208ENST00000375661 MELTFP08582 738 aa10.05□□□□□ -0.8
LSM2-208ENST00000375661 AZGP1P25311 298 aaKnown RBP10.05□□□□□ -0.8
LSM2-208ENST00000375661 PITPNBP48739 271 aa10.05□□□□□ -0.8
LSM2-208ENST00000375661 FUT6P51993 359 aa10.05□□□□□ -0.8
LSM2-208ENST00000375661 INSL4Q14641 139 aa10.05□□□□□ -0.8
LSM2-208ENST00000375661 TAF9Q16594 264 aa10.05□□□□□ -0.8
LSM2-208ENST00000375661 FAM201AQ5SY85 155 aa10.05□□□□□ -0.8
LSM2-208ENST00000375661 CRIP3Q6Q6R5 217 aa10.05□□□□□ -0.8
LSM2-208ENST00000375661 WDR82Q6UXN9 313 aa10.05□□□□□ -0.8
LSM2-208ENST00000375661 DCDC5Q6ZRR9 648 aa10.05□□□□□ -0.8
LSM2-208ENST00000375661 MS4A15Q8N5U1 240 aa10.05□□□□□ -0.8
LSM2-208ENST00000375661 TSPAN14Q8NG11 270 aa10.05□□□□□ -0.8
LSM2-208ENST00000375661 OR51A2Q8NGJ7 313 aa10.05□□□□□ -0.8
LSM2-208ENST00000375661 OR13C9Q8NGT0 318 aa10.05□□□□□ -0.8
LSM2-208ENST00000375661 SSMEM1Q8WWF3 244 aa10.05□□□□□ -0.8
LSM2-208ENST00000375661 DYRK2Q92630 601 aa10.05□□□□□ -0.8
LSM2-208ENST00000375661 FCGR1BQ92637 280 aa10.05□□□□□ -0.8
LSM2-208ENST00000375661 TECTBQ96PL2 329 aa10.05□□□□□ -0.8
LSM2-208ENST00000375661 DERL3Q96Q80 235 aa10.05□□□□□ -0.8
LSM2-208ENST00000375661 OR14A2Q96R54 314 aa10.05□□□□□ -0.8
LSM2-208ENST00000375661 TMED9Q9BVK6 235 aa10.05□□□□□ -0.8
LSM2-208ENST00000375661 TAS2R4Q9NYW5 299 aa10.05□□□□□ -0.8
LSM2-208ENST00000375661 RNF7Q9UBF6 113 aa10.05□□□□□ -0.8
LSM2-208ENST00000375661 CLN8Q9UBY8 286 aa10.05□□□□□ -0.8
LSM2-208ENST00000375661 SLC7A11Q9UPY5 501 aa10.05□□□□□ -0.8
LSM2-208ENST00000375661 RNF114Q9Y508 228 aa10.05□□□□□ -0.8
LSM2-208ENST00000375661 NOTCH1P46531 2555 aa10.05□□□□□ -0.8
LSM2-208ENST00000375661 FAM230AA0A1W2PPH8 454 aa10.04□□□□□ -0.8
LSM2-208ENST00000375661 C3orf80F5H4A9 247 aa10.04□□□□□ -0.8
LSM2-208ENST00000375661 GPX5O75715 221 aa10.04□□□□□ -0.8
LSM2-208ENST00000375661 RHBDL1O75783 438 aa10.04□□□□□ -0.8
LSM2-208ENST00000375661 ZNF205O95201 554 aa10.04□□□□□ -0.8
LSM2-208ENST00000375661 LHBP01229 141 aa10.04□□□□□ -0.8
LSM2-208ENST00000375661 CD2P06729 351 aa10.04□□□□□ -0.8
LSM2-208ENST00000375661 LIPFP07098 398 aa10.04□□□□□ -0.8
LSM2-208ENST00000375661 IGFBP3P17936 291 aaPredicted RBP10.04□□□□□ -0.8
LSM2-208ENST00000375661 PSMB9P28065 219 aa10.04□□□□□ -0.8
LSM2-208ENST00000375661 CFHR2P36980 270 aa10.04□□□□□ -0.8
LSM2-208ENST00000375661 NPY4RP50391 375 aa10.04□□□□□ -0.8
LSM2-208ENST00000375661 GP2P55259 537 aaKnown RBP10.04□□□□□ -0.8
LSM2-208ENST00000375661 FGF12P61328 243 aa10.04□□□□□ -0.8
LSM2-208ENST00000375661 CNN3Q15417 329 aaKnown RBP10.04□□□□□ -0.8
LSM2-208ENST00000375661 NEDD8Q15843 81 aa10.04□□□□□ -0.8
LSM2-208ENST00000375661 ACSM3Q53FZ2 586 aa10.04□□□□□ -0.8
LSM2-208ENST00000375661 SYT6Q5T7P8 510 aaPredicted RBP10.04□□□□□ -0.8
LSM2-208ENST00000375661 WDR25Q64LD2 544 aaPredicted RBP10.04□□□□□ -0.8
LSM2-208ENST00000375661 HAGHLQ6PII5 290 aaPredicted RBP10.04□□□□□ -0.8
LSM2-208ENST00000375661 TMEM91Q6ZNR0 172 aa10.04□□□□□ -0.8
LSM2-208ENST00000375661 ANGPTL5Q86XS5 388 aa10.04□□□□□ -0.8
LSM2-208ENST00000375661 CALHM1Q8IU99 346 aa10.04□□□□□ -0.8
LSM2-208ENST00000375661 GCSAMQ8N6F7 178 aa10.04□□□□□ -0.8
LSM2-208ENST00000375661 DNAAF1Q8NEP3 725 aa10.04□□□□□ -0.8
LSM2-208ENST00000375661 OR5D14Q8NGL3 314 aa10.04□□□□□ -0.8
LSM2-208ENST00000375661 OR11L1Q8NGX0 322 aa10.04□□□□□ -0.8
LSM2-208ENST00000375661 TBC1D15Q8TC07 691 aa10.04□□□□□ -0.8
LSM2-208ENST00000375661 AQP3Q92482 292 aa10.04□□□□□ -0.8
LSM2-208ENST00000375661 TMEM203Q969S6 136 aa10.04□□□□□ -0.8
LSM2-208ENST00000375661 SPSB1Q96BD6 273 aa10.04□□□□□ -0.8
LSM2-208ENST00000375661 BORCS8Q96FH0 119 aa10.04□□□□□ -0.8
LSM2-208ENST00000375661 TRAV8-7A0A075B6U6 113 aa10.03□□□□□ -0.8
LSM2-208ENST00000375661 hCG_1807616A0A1W2PRN6 198 aa10.03□□□□□ -0.8
LSM2-208ENST00000375661 SULT1B1O43704 296 aa10.03□□□□□ -0.8
LSM2-208ENST00000375661 SYNGR1O43759 233 aa10.03□□□□□ -0.8
LSM2-208ENST00000375661 SMIM18P0DKX4 95 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms