RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 IL36GQ9NZH8 169 aa12.52□□□□□ -0.41
HSPG2-201ENST00000374673 CTSZQ9UBR2 303 aa12.52□□□□□ -0.41
HSPG2-201ENST00000374673 GSTK1Q9Y2Q3 226 aa12.52□□□□□ -0.41
HSPG2-201ENST00000374673 ABCA2Q9BZC7 2435 aa12.52□□□□□ -0.41
HSPG2-201ENST00000374673 DOCK11Q5JSL3 2073 aa12.52□□□□□ -0.41
HSPG2-201ENST00000374673 MED13LQ71F56 2210 aa12.52□□□□□ -0.41
HSPG2-201ENST00000374673 SHISA3A0PJX4 238 aa12.51□□□□□ -0.41
HSPG2-201ENST00000374673 NKX6-3A6NJ46 265 aa12.51□□□□□ -0.41
HSPG2-201ENST00000374673 B4DSR2 109 aa12.51□□□□□ -0.41
HSPG2-201ENST00000374673 TMPRSS2O15393 492 aa12.51□□□□□ -0.41
HSPG2-201ENST00000374673 ADAM20O43506 726 aa12.51□□□□□ -0.41
HSPG2-201ENST00000374673 MYL9P24844 172 aa12.51□□□□□ -0.41
HSPG2-201ENST00000374673 MTNR1BP49286 362 aa12.51□□□□□ -0.41
HSPG2-201ENST00000374673 NPY4RP50391 375 aa12.51□□□□□ -0.41
HSPG2-201ENST00000374673 BMXP51813 675 aa12.51□□□□□ -0.41
HSPG2-201ENST00000374673 SEC61A1P61619 476 aaKnown RBP12.51□□□□□ -0.41
HSPG2-201ENST00000374673 TIMM50Q3ZCQ8 353 aa12.51□□□□□ -0.41
HSPG2-201ENST00000374673 ESCO2Q56NI9 601 aa12.51□□□□□ -0.41
HSPG2-201ENST00000374673 C1orf100Q5SVJ3 147 aa12.51□□□□□ -0.41
HSPG2-201ENST00000374673 ELP2Q6IA86 826 aa12.51□□□□□ -0.41
HSPG2-201ENST00000374673 FIP1L1Q6UN15 594 aaKnown RBP12.51□□□□□ -0.41
HSPG2-201ENST00000374673 ZNF841Q6ZN19 808 aa12.51□□□□□ -0.41
HSPG2-201ENST00000374673 GDPGP1Q6ZNW5 385 aa12.51□□□□□ -0.41
HSPG2-201ENST00000374673 BIVMQ86UB2 503 aa12.51□□□□□ -0.41
HSPG2-201ENST00000374673 LINC01356Q8N9X3 169 aa12.51□□□□□ -0.41
HSPG2-201ENST00000374673 OR13F1Q8NGS4 319 aa12.51□□□□□ -0.41
HSPG2-201ENST00000374673 MSI2Q96DH6 328 aaKnown RBP12.51□□□□□ -0.41
HSPG2-201ENST00000374673 SDSLQ96GA7 329 aa12.51□□□□□ -0.41
HSPG2-201ENST00000374673 GAFA1Q96PS6 74 aa12.51□□□□□ -0.41
HSPG2-201ENST00000374673 S100A13Q99584 98 aa12.51□□□□□ -0.41
HSPG2-201ENST00000374673 CCL13Q99616 98 aa12.51□□□□□ -0.41
HSPG2-201ENST00000374673 GFI1Q99684 422 aa12.51□□□□□ -0.41
HSPG2-201ENST00000374673 CHCHD6Q9BRQ6 235 aa12.51□□□□□ -0.41
HSPG2-201ENST00000374673 METTL9Q9H1A3 318 aa12.51□□□□□ -0.41
HSPG2-201ENST00000374673 SEBOXQ9HB31 216 aaPredicted RBP12.51□□□□□ -0.41
HSPG2-201ENST00000374673 HMG20AQ9NP66 347 aa12.51□□□□□ -0.41
HSPG2-201ENST00000374673 MRPS28Q9Y2Q9 187 aaKnown RBP12.51□□□□□ -0.41
HSPG2-201ENST00000374673 RFPL4AA6NLU0 287 aa12.5□□□□□ -0.41
HSPG2-201ENST00000374673 RFPL4AL1F8VTS6 287 aa12.5□□□□□ -0.41
HSPG2-201ENST00000374673 PDCD5O14737 125 aa12.5□□□□□ -0.41
HSPG2-201ENST00000374673 SIGLEC5O15389 551 aa12.5□□□□□ -0.41
HSPG2-201ENST00000374673 CD5LO43866 347 aa12.5□□□□□ -0.41
HSPG2-201ENST00000374673 ZNF780AO75290 641 aaPredicted RBP12.5□□□□□ -0.41
HSPG2-201ENST00000374673 FOXH1O75593 365 aa12.5□□□□□ -0.41
HSPG2-201ENST00000374673 CDRT1O95170 752 aa12.5□□□□□ -0.41
HSPG2-201ENST00000374673 TFAP2AP05549 437 aa12.5□□□□□ -0.41
HSPG2-201ENST00000374673 PRKACAP17612 351 aa12.5□□□□□ -0.41
HSPG2-201ENST00000374673 ALDH3B2P48448 385 aa12.5□□□□□ -0.41
HSPG2-201ENST00000374673 PITPNBP48739 271 aa12.5□□□□□ -0.41
HSPG2-201ENST00000374673 PSMD7P51665 324 aa12.5□□□□□ -0.41
HSPG2-201ENST00000374673 FGF12P61328 243 aa12.5□□□□□ -0.41
HSPG2-201ENST00000374673 ZNF146Q15072 292 aa12.5□□□□□ -0.41
HSPG2-201ENST00000374673 RSU1Q15404 277 aa12.5□□□□□ -0.41
HSPG2-201ENST00000374673 SPIN3Q5JUX0 258 aa12.5□□□□□ -0.41
HSPG2-201ENST00000374673 CYB5R2Q6BCY4 276 aa12.5□□□□□ -0.41
HSPG2-201ENST00000374673 AWAT2Q6E213 333 aa12.5□□□□□ -0.41
HSPG2-201ENST00000374673 OR4D6Q8NGJ1 314 aa12.5□□□□□ -0.41
HSPG2-201ENST00000374673 MED30Q96HR3 178 aa12.5□□□□□ -0.41
HSPG2-201ENST00000374673 SSBP3Q9BWW4 388 aaPredicted RBP12.5□□□□□ -0.41
HSPG2-201ENST00000374673 ING4Q9UNL4 249 aa12.5□□□□□ -0.41
HSPG2-201ENST00000374673 POLR3KQ9Y2Y1 108 aaPredicted RBP12.5□□□□□ -0.41
HSPG2-201ENST00000374673 AK6Q9Y3D8 172 aaKnown RBP12.5□□□□□ -0.41
HSPG2-201ENST00000374673 FLNAP21333 2647 aaKnown RBP12.49□□□□□ -0.41
HSPG2-201ENST00000374673 A0A1B0GW55 424 aa12.49□□□□□ -0.41
HSPG2-201ENST00000374673 KIAA1324LA8MWY0 1029 aaPredicted RBP12.49□□□□□ -0.41
HSPG2-201ENST00000374673 TFF1P04155 84 aa12.49□□□□□ -0.41
HSPG2-201ENST00000374673 MSMBP08118 114 aa12.49□□□□□ -0.41
HSPG2-201ENST00000374673 DUX4L2P0CJ85 424 aa12.49□□□□□ -0.41
HSPG2-201ENST00000374673 DUX4L3P0CJ86 424 aa12.49□□□□□ -0.41
HSPG2-201ENST00000374673 DUX4L4P0CJ87 422 aa12.49□□□□□ -0.41
HSPG2-201ENST00000374673 DUX4L5P0CJ88 424 aa12.49□□□□□ -0.41
HSPG2-201ENST00000374673 DUX4L6P0CJ89 424 aa12.49□□□□□ -0.41
HSPG2-201ENST00000374673 DUX4L7P0CJ90 424 aa12.49□□□□□ -0.41
HSPG2-201ENST00000374673 ZNF16P17020 682 aaPredicted RBP12.49□□□□□ -0.41
HSPG2-201ENST00000374673 PRDX2P32119 198 aa12.49□□□□□ -0.41
HSPG2-201ENST00000374673 GABRA2P47869 451 aa12.49□□□□□ -0.41
HSPG2-201ENST00000374673 GNB2P62879 340 aa12.49□□□□□ -0.41
HSPG2-201ENST00000374673 IL13RA1P78552 427 aa12.49□□□□□ -0.41
HSPG2-201ENST00000374673 GPR176Q14439 515 aa12.49□□□□□ -0.41
HSPG2-201ENST00000374673 DGUOKQ16854 277 aa12.49□□□□□ -0.41
HSPG2-201ENST00000374673 WDR25Q64LD2 544 aaPredicted RBP12.49□□□□□ -0.41
HSPG2-201ENST00000374673 DUX4L9Q6RFH8 374 aaPredicted RBP12.49□□□□□ -0.41
HSPG2-201ENST00000374673 GLIPR1L1Q6UWM5 242 aa12.49□□□□□ -0.41
HSPG2-201ENST00000374673 ZNF561Q8N587 486 aa12.49□□□□□ -0.41
HSPG2-201ENST00000374673 CD177Q8N6Q3 437 aa12.49□□□□□ -0.41
HSPG2-201ENST00000374673 FAM216BQ8N7L0 139 aa12.49□□□□□ -0.41
HSPG2-201ENST00000374673 OR51T1Q8NGJ9 327 aa12.49□□□□□ -0.41
HSPG2-201ENST00000374673 OR6M1Q8NGM8 313 aa12.49□□□□□ -0.41
HSPG2-201ENST00000374673 TBC1D15Q8TC07 691 aa12.49□□□□□ -0.41
HSPG2-201ENST00000374673 C1orf147Q96MC9 270 aaPredicted RBP12.49□□□□□ -0.41
HSPG2-201ENST00000374673 KCTD7Q96MP8 289 aa12.49□□□□□ -0.41
HSPG2-201ENST00000374673 SMR3AQ99954 134 aa12.49□□□□□ -0.41
HSPG2-201ENST00000374673 ELL3Q9HB65 397 aaPredicted RBP12.49□□□□□ -0.41
HSPG2-201ENST00000374673 PCDHB16Q9NRJ7 776 aa12.49□□□□□ -0.41
HSPG2-201ENST00000374673 IL36RNQ9UBH0 155 aa12.49□□□□□ -0.41
HSPG2-201ENST00000374673 GHRLQ9UBU3 117 aa12.49□□□□□ -0.41
HSPG2-201ENST00000374673 DUX4Q9UBX2 424 aa12.49□□□□□ -0.41
HSPG2-201ENST00000374673 CLN8Q9UBY8 286 aa12.49□□□□□ -0.41
HSPG2-201ENST00000374673 OR14J1Q9UGF5 321 aa12.49□□□□□ -0.41
HSPG2-201ENST00000374673 MAB21L2Q9Y586 359 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms