RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 CACFD1Q9UGQ2 172 aa14.3□□□□□ -0.12
COL18A1-203ENST00000359759 CRISP2P16562 243 aa14.3□□□□□ -0.12
COL18A1-203ENST00000359759 TSPO2Q5TGU0 170 aa14.3□□□□□ -0.12
COL18A1-203ENST00000359759 OR11G2Q8NGC1 345 aa14.3□□□□□ -0.12
COL18A1-203ENST00000359759 PACRGQ96M98 296 aaPredicted RBP14.3□□□□□ -0.12
COL18A1-203ENST00000359759 ARRDC1-AS1Q9H2J1 176 aa14.3□□□□□ -0.12
COL18A1-203ENST00000359759 FBLL1A6NHQ2 334 aaKnown RBP14.29□□□□□ -0.12
COL18A1-203ENST00000359759 DHRS13Q6UX07 377 aa14.29□□□□□ -0.12
COL18A1-203ENST00000359759 SLIRPQ9GZT3 109 aaKnown RBP14.29□□□□□ -0.12
COL18A1-203ENST00000359759 GCSHP23434 173 aa14.29□□□□□ -0.12
COL18A1-203ENST00000359759 MVDP53602 400 aa14.29□□□□□ -0.12
COL18A1-203ENST00000359759 GNG3P63215 75 aa14.29□□□□□ -0.12
COL18A1-203ENST00000359759 ELOBQ15370 118 aa14.29□□□□□ -0.12
COL18A1-203ENST00000359759 OR1C1Q15619 314 aa14.29□□□□□ -0.12
COL18A1-203ENST00000359759 NKG7Q16617 165 aa14.29□□□□□ -0.12
COL18A1-203ENST00000359759 CBLN2Q8IUK8 224 aa14.29□□□□□ -0.12
COL18A1-203ENST00000359759 MEGF10Q96KG7 1140 aa14.29□□□□□ -0.12
COL18A1-203ENST00000359759 RAB40CQ96S21 281 aa14.29□□□□□ -0.12
COL18A1-203ENST00000359759 TBX19O60806 448 aa14.29□□□□□ -0.12
COL18A1-203ENST00000359759 MPZL1O95297 269 aa14.29□□□□□ -0.12
COL18A1-203ENST00000359759 RPLP1P05386 114 aaKnown RBP14.29□□□□□ -0.12
COL18A1-203ENST00000359759 SSX1Q16384 188 aa14.29□□□□□ -0.12
COL18A1-203ENST00000359759 TNXAQ16473 311 aa14.29□□□□□ -0.12
COL18A1-203ENST00000359759 DGAT2L7PQ6IED9 249 aa14.29□□□□□ -0.12
COL18A1-203ENST00000359759 RTN4RL1Q86UN2 441 aaPredicted RBP14.29□□□□□ -0.12
COL18A1-203ENST00000359759 SEC11CQ9BY50 192 aa14.29□□□□□ -0.12
COL18A1-203ENST00000359759 MMP17Q9ULZ9 603 aa14.29□□□□□ -0.12
COL18A1-203ENST00000359759 POLR2GP62487 172 aaKnown RBP eCLIP14.29□□□□□ -0.121e-6■■□□□ 13.6
COL18A1-203ENST00000359759 ZNF841Q6ZN19 808 aa14.29□□□□□ -0.12
COL18A1-203ENST00000359759 CNTD2Q9H8S5 307 aa14.29□□□□□ -0.12
COL18A1-203ENST00000359759 IL36GQ9NZH8 169 aa14.29□□□□□ -0.12
COL18A1-203ENST00000359759 OR2T8A6NH00 312 aa14.29□□□□□ -0.12
COL18A1-203ENST00000359759 SRSF9Q13242 221 aaKnown RBP eCLIP14.29□□□□□ -0.126e-7■■□□□ 12.1
COL18A1-203ENST00000359759 IGFBP7Q16270 282 aa14.29□□□□□ -0.12
COL18A1-203ENST00000359759 MRPL54Q6P161 138 aaKnown RBP14.29□□□□□ -0.12
COL18A1-203ENST00000359759 GNRHR2Q96P88 292 aa14.29□□□□□ -0.12
COL18A1-203ENST00000359759 UBE2ZQ9H832 354 aaPredicted RBP14.29□□□□□ -0.12
COL18A1-203ENST00000359759 MYOZ1Q9NP98 299 aaPredicted RBP14.29□□□□□ -0.12
COL18A1-203ENST00000359759 DUXBA0A1W2PPF3 345 aa14.28□□□□□ -0.12
COL18A1-203ENST00000359759 CDRT15L2A8MXV6 281 aa14.28□□□□□ -0.12
COL18A1-203ENST00000359759 KLK8O60259 260 aa14.28□□□□□ -0.12
COL18A1-203ENST00000359759 PGA3P0DJD8 388 aa14.28□□□□□ -0.12
COL18A1-203ENST00000359759 ABHD3Q8WU67 409 aa14.28□□□□□ -0.12
COL18A1-203ENST00000359759 PP6455Q8WZ26 134 aa14.28□□□□□ -0.12
COL18A1-203ENST00000359759 MRGPRX1Q96LB2 322 aa14.28□□□□□ -0.12
COL18A1-203ENST00000359759 CD300CQ08708 224 aa14.28□□□□□ -0.12
COL18A1-203ENST00000359759 RNF165Q6ZSG1 346 aa14.28□□□□□ -0.12
COL18A1-203ENST00000359759 PDPNQ86YL7 162 aa14.28□□□□□ -0.12
COL18A1-203ENST00000359759 D2HGDHQ8N465 521 aa14.28□□□□□ -0.12
COL18A1-203ENST00000359759 OR2C3Q8N628 320 aa14.28□□□□□ -0.12
COL18A1-203ENST00000359759 SLC7A10Q9NS82 523 aa14.28□□□□□ -0.12
COL18A1-203ENST00000359759 DLK1P80370 383 aa14.28□□□□□ -0.12
COL18A1-203ENST00000359759 ZNF117Q03924 483 aa14.28□□□□□ -0.12
COL18A1-203ENST00000359759 HIST3H3Q16695 136 aa14.28□□□□□ -0.12
COL18A1-203ENST00000359759 PRDM7Q9NQW5 492 aa14.28□□□□□ -0.12
COL18A1-203ENST00000359759 FUT9Q9Y231 359 aa14.28□□□□□ -0.12
COL18A1-203ENST00000359759 PCDHGA9Q9Y5G4 932 aaKnown RBP14.28□□□□□ -0.12
COL18A1-203ENST00000359759 LOC389332A0A1B0GUA5 103 aa14.28□□□□□ -0.12
COL18A1-203ENST00000359759 TCF21O43680 179 aa14.28□□□□□ -0.12
COL18A1-203ENST00000359759 GABRA1P14867 456 aa14.28□□□□□ -0.12
COL18A1-203ENST00000359759 UBE2L3P68036 154 aaKnown RBP14.28□□□□□ -0.12
COL18A1-203ENST00000359759 HES3Q5TGS1 186 aa14.28□□□□□ -0.12
COL18A1-203ENST00000359759 Q9N2K0 584 aa14.28□□□□□ -0.12
COL18A1-203ENST00000359759 NAT8Q9UHE5 227 aa14.28□□□□□ -0.12
COL18A1-203ENST00000359759 LRRC37A3O60309 1634 aa14.28□□□□□ -0.12
COL18A1-203ENST00000359759 EPPINO95925 133 aa14.28□□□□□ -0.12
COL18A1-203ENST00000359759 SBK3P0C264 359 aa14.28□□□□□ -0.12
COL18A1-203ENST00000359759 ACVR1Q04771 509 aa14.28□□□□□ -0.12
COL18A1-203ENST00000359759 WDR73Q6P4I2 378 aa14.28□□□□□ -0.12
COL18A1-203ENST00000359759 OR4D10Q8NGI6 311 aa14.28□□□□□ -0.12
COL18A1-203ENST00000359759 SH2D2AQ9NP31 389 aa14.28□□□□□ -0.12
COL18A1-203ENST00000359759 ZNF253O75346 499 aa14.27□□□□□ -0.12
COL18A1-203ENST00000359759 PATE4P0C8F1 98 aa14.27□□□□□ -0.12
COL18A1-203ENST00000359759 TM4SF4P48230 202 aa14.27□□□□□ -0.12
COL18A1-203ENST00000359759 MPV17LQ2QL34 196 aa14.27□□□□□ -0.12
COL18A1-203ENST00000359759 TMEM65Q6PI78 240 aa14.27□□□□□ -0.12
COL18A1-203ENST00000359759 TSPAN32Q96QS1 320 aa14.27□□□□□ -0.12
COL18A1-203ENST00000359759 FAM90A27PA6NNH2 459 aa14.27□□□□□ -0.12
COL18A1-203ENST00000359759 RAB29O14966 203 aa14.27□□□□□ -0.12
COL18A1-203ENST00000359759 PPM1DO15297 605 aa14.27□□□□□ -0.12
COL18A1-203ENST00000359759 ADAP1O75689 374 aa14.27□□□□□ -0.12
COL18A1-203ENST00000359759 TMEM33P57088 247 aa14.27□□□□□ -0.12
COL18A1-203ENST00000359759 FUT7Q11130 342 aa14.27□□□□□ -0.12
COL18A1-203ENST00000359759 NUBPLQ8TB37 319 aa14.27□□□□□ -0.12
COL18A1-203ENST00000359759 RALYQ9UKM9 306 aaKnown RBP14.27□□□□□ -0.12
COL18A1-203ENST00000359759 PPIL1Q9Y3C6 166 aa14.27□□□□□ -0.12
COL18A1-203ENST00000359759 PAM16Q9Y3D7 125 aa14.27□□□□□ -0.12
COL18A1-203ENST00000359759 TBC1D26Q86UD7 250 aa14.27□□□□□ -0.13
COL18A1-203ENST00000359759 MCHR2Q969V1 340 aa14.27□□□□□ -0.13
COL18A1-203ENST00000359759 COA4Q9NYJ1 87 aa14.27□□□□□ -0.13
COL18A1-203ENST00000359759 RNF24Q9Y225 148 aa14.27□□□□□ -0.13
COL18A1-203ENST00000359759 INHBBP09529 407 aa14.27□□□□□ -0.13
COL18A1-203ENST00000359759 Q7L0L9 218 aa14.27□□□□□ -0.13
COL18A1-203ENST00000359759 NUFIP2Q7Z417 695 aaKnown RBP14.27□□□□□ -0.13
COL18A1-203ENST00000359759 LRRC29Q8WV35 223 aa14.27□□□□□ -0.13
COL18A1-203ENST00000359759 TOX2Q96NM4 488 aa14.27□□□□□ -0.13
COL18A1-203ENST00000359759 SEBOXQ9HB31 216 aaPredicted RBP14.27□□□□□ -0.13
COL18A1-203ENST00000359759 PCOLCE2Q9UKZ9 415 aa14.27□□□□□ -0.13
COL18A1-203ENST00000359759 TRGV5A0A0B4J1U4 118 aa14.27□□□□□ -0.13
COL18A1-203ENST00000359759 ORM1P02763 201 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms