RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 KCNAB3O43448 404 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 RTN4RL1Q86UN2 441 aaPredicted RBP5.44□□□□□ -1.54
VPS13B-203ENST00000358544 OR10G8Q8NGN5 311 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 RALYQ9UKM9 306 aaKnown RBP5.44□□□□□ -1.54
VPS13B-203ENST00000358544 SERTM1A2A2V5 107 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 CYB5R3P00387 301 aaPredicted RBP5.43□□□□□ -1.54
VPS13B-203ENST00000358544 CD22P20273 847 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 LAIR1Q6GTX8 287 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 DGAT2L6Q6ZPD8 337 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 GVQW1Q8N7I0 195 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 VN1R17PQ8TDU5 208 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 ARHGAP5-AS1Q96IT6 56 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 CHRDL1Q9BU40 450 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 LAT2Q9GZY6 243 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 SLC52A3Q9NQ40 469 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 MRM2Q9UI43 246 aaKnown RBP5.43□□□□□ -1.54
VPS13B-203ENST00000358544 WIPI2Q9Y4P8 454 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 ACTL6BO94805 426 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 EGR3Q06889 387 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 TCEAL8Q8IYN2 117 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 LPAR5Q9H1C0 372 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 FBXO34Q9NWN3 711 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 HIF1ANQ9NWT6 349 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 ALKBH4Q9NXW9 302 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 CLDN16Q9Y5I7 305 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 PLCH1Q4KWH8 1693 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 UBE2CO00762 179 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 SFTPCP11686 197 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 APLNRP35414 380 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 ZFP36L2P47974 494 aaKnown RBP5.43□□□□□ -1.54
VPS13B-203ENST00000358544 KIAA0040Q15053 153 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 C12orf54Q6X4T0 127 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 GMLQ99445 158 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 MIEN1Q9BRT3 115 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 TMEM147Q9BVK8 224 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 SLC2A4RGQ9NR83 387 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 P4HTMQ9NXG6 502 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 SUCLG1P53597 346 aaKnown RBP5.43□□□□□ -1.54
VPS13B-203ENST00000358544 A0A0A6YYD5 115 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 MSX1P28360 303 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 ADPRHP54922 357 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 THSD4Q6ZMP0 1018 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 ZNF573Q86YE8 665 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 TIAL1Q01085 375 aaKnown RBP eCLIP5.43□□□□□ -1.54
VPS13B-203ENST00000358544 ZNF547Q8IVP9 402 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 TSACCQ96A04 125 aaPredicted RBP5.43□□□□□ -1.54
VPS13B-203ENST00000358544 FAM173AQ9BQD7 235 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 H0YL77 283 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 ZNF17P17021 662 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 ZNF468Q5VIY5 522 aaPredicted RBP5.43□□□□□ -1.54
VPS13B-203ENST00000358544 ZNF813Q6ZN06 617 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 C19orf47Q8N9M1 422 aaKnown RBP5.43□□□□□ -1.54
VPS13B-203ENST00000358544 ZG16BQ96DA0 208 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 MASP2O00187 686 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 ELNP15502 786 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 GLIPR1P48060 266 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 CD200R1LQ6Q8B3 271 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 NUFIP2Q7Z417 695 aaKnown RBP5.43□□□□□ -1.54
VPS13B-203ENST00000358544 MS4A6EQ96DS6 147 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 LPAR4Q99677 370 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 TXNIPQ9H3M7 391 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 MRPS18AQ9NVS2 196 aaKnown RBP5.43□□□□□ -1.54
VPS13B-203ENST00000358544 ZIC2O95409 532 aaPredicted RBP5.43□□□□□ -1.54
VPS13B-203ENST00000358544 FABP2P12104 132 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 KCNAB1Q14722 419 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 HIKESHIQ53FT3 197 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 MRPL54Q6P161 138 aaKnown RBP5.43□□□□□ -1.54
VPS13B-203ENST00000358544 ADAMTS17Q8TE56 1095 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 A0A1W2PN81 502 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 CD74P04233 296 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 TMIGD3P0DMS9 266 aaPredicted RBP5.43□□□□□ -1.54
VPS13B-203ENST00000358544 OTPQ5XKR4 325 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 MORN4Q8NDC4 146 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 ALOX12BO75342 701 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 P2RY2P41231 377 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 TMEM91Q6ZNR0 172 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 RDH5Q92781 318 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 C2orf88Q9BSF0 95 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 MRPL37Q9BZE1 423 aaKnown RBP5.43□□□□□ -1.54
VPS13B-203ENST00000358544 WDR13Q9H1Z4 485 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 CNTD2Q9H8S5 307 aa5.43□□□□□ -1.54
VPS13B-203ENST00000358544 NDUFS8O00217 210 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 SOD3P08294 240 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 THBS4P35443 961 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 MAJINQ3KP22 176 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 BAHCC1Q9P281 2608 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 THADAQ6YHU6 1953 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 NCKAP5O14513 1909 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 TIMP1P01033 207 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 BPIFB3P59826 476 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 FBXO46Q6PJ61 603 aaPredicted RBP5.42□□□□□ -1.54
VPS13B-203ENST00000358544 GJC3Q8NFK1 279 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 FAAP24Q9BTP7 215 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 B9D1Q9UPM9 204 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 ARAP2Q8WZ64 1704 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 RAB29O14966 203 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 ZP1P60852 638 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 LANCL3Q6ZV70 420 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 MRGPRGQ86SM5 289 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 REG4Q9BYZ8 158 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms