RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 SFXN4Q6P4A7 337 aa12.78□□□□□ -0.36
TPM1-206ENST00000358278 ACP7Q6ZNF0 438 aa12.78□□□□□ -0.36
TPM1-206ENST00000358278 KRTAP1-3Q8IUG1 177 aa12.78□□□□□ -0.36
TPM1-206ENST00000358278 FAM58AQ8N1B3 248 aa12.78□□□□□ -0.36
TPM1-206ENST00000358278 NDNFQ8TB73 568 aa12.78□□□□□ -0.36
TPM1-206ENST00000358278 TBC1D15Q8TC07 691 aa12.78□□□□□ -0.36
TPM1-206ENST00000358278 GAL3ST1Q99999 423 aa12.78□□□□□ -0.36
TPM1-206ENST00000358278 RHOFQ9HBH0 211 aa12.78□□□□□ -0.36
TPM1-206ENST00000358278 HES4Q9HCC6 221 aa12.78□□□□□ -0.36
TPM1-206ENST00000358278 PCDHB16Q9NRJ7 776 aa12.78□□□□□ -0.36
TPM1-206ENST00000358278 NLKQ9UBE8 527 aa12.78□□□□□ -0.36
TPM1-206ENST00000358278 STEAP1Q9UHE8 339 aa12.78□□□□□ -0.36
TPM1-206ENST00000358278 CEPT1Q9Y6K0 416 aa12.78□□□□□ -0.36
TPM1-206ENST00000358278 MED13LQ71F56 2210 aa12.78□□□□□ -0.36
TPM1-206ENST00000358278 ABCA2Q9BZC7 2435 aa12.77□□□□□ -0.36
TPM1-206ENST00000358278 ZNF780AO75290 641 aaPredicted RBP12.77□□□□□ -0.36
TPM1-206ENST00000358278 UBBP0CG47 229 aa12.77□□□□□ -0.36
TPM1-206ENST00000358278 CALCBP10092 127 aa12.77□□□□□ -0.36
TPM1-206ENST00000358278 CD37P11049 281 aa12.77□□□□□ -0.36
TPM1-206ENST00000358278 RPS19P39019 145 aaKnown RBP12.77□□□□□ -0.36
TPM1-206ENST00000358278 BMXP51813 675 aa12.77□□□□□ -0.36
TPM1-206ENST00000358278 SNU13P55769 128 aaKnown RBP12.77□□□□□ -0.36
TPM1-206ENST00000358278 CLDN12P56749 244 aa12.77□□□□□ -0.36
TPM1-206ENST00000358278 GPR176Q14439 515 aa12.77□□□□□ -0.36
TPM1-206ENST00000358278 P2RY14Q15391 338 aa12.77□□□□□ -0.36
TPM1-206ENST00000358278 DGUOKQ16854 277 aa12.77□□□□□ -0.36
TPM1-206ENST00000358278 ZNF404Q494X3 552 aa12.77□□□□□ -0.36
TPM1-206ENST00000358278 TEX36Q5VZQ5 186 aa12.77□□□□□ -0.36
TPM1-206ENST00000358278 ASCL4Q6XD76 172 aa12.77□□□□□ -0.36
TPM1-206ENST00000358278 FAM90A1Q86YD7 464 aa12.77□□□□□ -0.36
TPM1-206ENST00000358278 SPICQ8N5J4 248 aa12.77□□□□□ -0.36
TPM1-206ENST00000358278 C12orf43Q96C57 262 aaKnown RBP12.77□□□□□ -0.36
TPM1-206ENST00000358278 DCSTAMPQ9H295 470 aa12.77□□□□□ -0.36
TPM1-206ENST00000358278 IL36GQ9NZH8 169 aa12.77□□□□□ -0.36
TPM1-206ENST00000358278 GHRLQ9UBU3 117 aa12.77□□□□□ -0.36
TPM1-206ENST00000358278 DAPK2Q9UIK4 370 aa12.77□□□□□ -0.36
TPM1-206ENST00000358278 ZANQ9Y493 2812 aa12.77□□□□□ -0.37
TPM1-206ENST00000358278 A0A0G2JK05 382 aa12.76□□□□□ -0.37
TPM1-206ENST00000358278 OR2AT4A6NND4 320 aa12.76□□□□□ -0.37
TPM1-206ENST00000358278 VWC2LB2RUY7 222 aa12.76□□□□□ -0.37
TPM1-206ENST00000358278 H3BMQ9 156 aa12.76□□□□□ -0.37
TPM1-206ENST00000358278 BPNT1O95861 308 aa12.76□□□□□ -0.37
TPM1-206ENST00000358278 GYPAP02724 150 aa12.76□□□□□ -0.37
TPM1-206ENST00000358278 ARSBP15848 533 aa12.76□□□□□ -0.37
TPM1-206ENST00000358278 LRRC28Q86X40 367 aaPredicted RBP12.76□□□□□ -0.37
TPM1-206ENST00000358278 WFDC11Q8NEX6 87 aa12.76□□□□□ -0.37
TPM1-206ENST00000358278 OR5T2Q8NGG2 359 aa12.76□□□□□ -0.37
TPM1-206ENST00000358278 TMEM246Q9BRR3 403 aa12.76□□□□□ -0.37
TPM1-206ENST00000358278 CST11Q9H112 138 aa12.76□□□□□ -0.37
TPM1-206ENST00000358278 LIN7BQ9HAP6 207 aa12.76□□□□□ -0.37
TPM1-206ENST00000358278 TMEM165Q9HC07 324 aa12.76□□□□□ -0.37
TPM1-206ENST00000358278 HMG20AQ9NP66 347 aa12.76□□□□□ -0.37
TPM1-206ENST00000358278 OR14J1Q9UGF5 321 aa12.76□□□□□ -0.37
TPM1-206ENST00000358278 PCDHB10Q9UN67 800 aa12.76□□□□□ -0.37
TPM1-206ENST00000358278 WNK2Q9Y3S1 2297 aa12.76□□□□□ -0.37
TPM1-206ENST00000358278 ZNF469Q96JG9 3925 aaPredicted RBP12.76□□□□□ -0.37
TPM1-206ENST00000358278 SMIM31A0A1B0GVY4 71 aa12.76□□□□□ -0.37
TPM1-206ENST00000358278 CRTAPO75718 401 aaPredicted RBP12.76□□□□□ -0.37
TPM1-206ENST00000358278 FSTL3O95633 263 aa12.76□□□□□ -0.37
TPM1-206ENST00000358278 KNG1P01042 644 aa12.76□□□□□ -0.37
TPM1-206ENST00000358278 SLC2A2P11168 524 aaPredicted RBP12.76□□□□□ -0.37
TPM1-206ENST00000358278 FGF12P61328 243 aa12.76□□□□□ -0.37
TPM1-206ENST00000358278 TMEM155Q4W5P6 130 aa12.76□□□□□ -0.37
TPM1-206ENST00000358278 ELP2Q6IA86 826 aa12.76□□□□□ -0.37
TPM1-206ENST00000358278 FAM166AQ6J272 317 aa12.76□□□□□ -0.37
TPM1-206ENST00000358278 DCDC5Q6ZRR9 648 aa12.76□□□□□ -0.37
TPM1-206ENST00000358278 CROCCP3Q8IVE0 287 aa12.76□□□□□ -0.37
TPM1-206ENST00000358278 OR51D1Q8NGF3 324 aa12.76□□□□□ -0.37
TPM1-206ENST00000358278 FAM46BQ96A09 425 aa12.76□□□□□ -0.37
TPM1-206ENST00000358278 SLC25A28Q96A46 364 aa12.76□□□□□ -0.37
TPM1-206ENST00000358278 FAM3DQ96BQ1 224 aa12.76□□□□□ -0.37
TPM1-206ENST00000358278 C1orf147Q96MC9 270 aaPredicted RBP12.76□□□□□ -0.37
TPM1-206ENST00000358278 RBM38Q9H0Z9 239 aaKnown RBP12.76□□□□□ -0.37
TPM1-206ENST00000358278 KCNK15Q9H427 330 aa12.76□□□□□ -0.37
TPM1-206ENST00000358278 IL36RNQ9UBH0 155 aa12.76□□□□□ -0.37
TPM1-206ENST00000358278 RSL24D1Q9UHA3 163 aaKnown RBP12.76□□□□□ -0.37
TPM1-206ENST00000358278 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.76□□□□□ -0.375e-6■■■□□ 16.3
TPM1-206ENST00000358278 DSCAML1Q8TD84 2053 aa12.75□□□□□ -0.37
TPM1-206ENST00000358278 A0A1W2PP11 408 aa12.75□□□□□ -0.37
TPM1-206ENST00000358278 DPPA5A6NC42 116 aa12.75□□□□□ -0.37
TPM1-206ENST00000358278 NKX6-3A6NJ46 265 aa12.75□□□□□ -0.37
TPM1-206ENST00000358278 RFPL4AA6NLU0 287 aa12.75□□□□□ -0.37
TPM1-206ENST00000358278 RFPL4AL1F8VTS6 287 aa12.75□□□□□ -0.37
TPM1-206ENST00000358278 PSG2P11465 335 aa12.75□□□□□ -0.37
TPM1-206ENST00000358278 GTF2F2P13984 249 aa12.75□□□□□ -0.37
TPM1-206ENST00000358278 CFPP27918 469 aa12.75□□□□□ -0.37
TPM1-206ENST00000358278 GABRA2P47869 451 aa12.75□□□□□ -0.37
TPM1-206ENST00000358278 CAPZA1P52907 286 aa12.75□□□□□ -0.37
TPM1-206ENST00000358278 SPCS2Q15005 226 aa12.75□□□□□ -0.37
TPM1-206ENST00000358278 SPIN3Q5JUX0 258 aa12.75□□□□□ -0.37
TPM1-206ENST00000358278 IDNKQ5T6J7 187 aa12.75□□□□□ -0.37
TPM1-206ENST00000358278 STUMQ69YW2 141 aa12.75□□□□□ -0.37
TPM1-206ENST00000358278 OSR2Q8N2R0 312 aa12.75□□□□□ -0.37
TPM1-206ENST00000358278 SLC25A46Q96AG3 418 aa12.75□□□□□ -0.37
TPM1-206ENST00000358278 GLS2Q9UI32 602 aa12.75□□□□□ -0.37
TPM1-206ENST00000358278 MALRD1Q5VYJ5 2156 aa12.74□□□□□ -0.37
TPM1-206ENST00000358278 A0A0B4J203 849 aa12.74□□□□□ -0.37
TPM1-206ENST00000358278 CEACAM18A8MTB9 384 aa12.74□□□□□ -0.37
TPM1-206ENST00000358278 TMPRSS2O15393 492 aa12.74□□□□□ -0.37
TPM1-206ENST00000358278 NDUFA2O43678 99 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms