RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 IFNA21P01568 189 aa19.26■□□□□ 0.67
NKX2-1-201ENST00000354822 COX5BP10606 129 aa19.26■□□□□ 0.67
NKX2-1-201ENST00000354822 RRADP55042 308 aa19.26■□□□□ 0.67
NKX2-1-201ENST00000354822 EIF5AP63241 154 aaKnown RBP19.26■□□□□ 0.67
NKX2-1-201ENST00000354822 RNF141Q8WVD5 230 aa19.26■□□□□ 0.67
NKX2-1-201ENST00000354822 IP6K3Q96PC2 410 aa19.26■□□□□ 0.67
NKX2-1-201ENST00000354822 VPS13AQ96RL7 3174 aa19.26■□□□□ 0.67
NKX2-1-201ENST00000354822 MSTNO14793 375 aa19.26■□□□□ 0.67
NKX2-1-201ENST00000354822 TAAR5O14804 337 aa19.26■□□□□ 0.67
NKX2-1-201ENST00000354822 PDCD6O75340 191 aa19.26■□□□□ 0.67
NKX2-1-201ENST00000354822 OPRM1P35372 400 aa19.26■□□□□ 0.67
NKX2-1-201ENST00000354822 PRSS12P56730 875 aa19.26■□□□□ 0.67
NKX2-1-201ENST00000354822 RBM39Q14498 530 aaKnown RBP19.26■□□□□ 0.67
NKX2-1-201ENST00000354822 PIGYQ3MUY2 71 aa19.26■□□□□ 0.67
NKX2-1-201ENST00000354822 ACKR4Q9NPB9 350 aa19.26■□□□□ 0.67
NKX2-1-201ENST00000354822 TMEM100Q9NV29 134 aa19.26■□□□□ 0.67
NKX2-1-201ENST00000354822 ZNF724A8MTY0 619 aa19.25■□□□□ 0.67
NKX2-1-201ENST00000354822 IGHV3-9P01782 118 aa19.25■□□□□ 0.67
NKX2-1-201ENST00000354822 ITGA3P26006 1051 aa19.25■□□□□ 0.67
NKX2-1-201ENST00000354822 TMEM211Q6ICI0 200 aa19.25■□□□□ 0.67
NKX2-1-201ENST00000354822 FNDC9Q8TBE3 224 aa19.25■□□□□ 0.67
NKX2-1-201ENST00000354822 TTTY12Q9BZ98 90 aa19.25■□□□□ 0.67
NKX2-1-201ENST00000354822 ZNF286AQ9HBT8 521 aa19.25■□□□□ 0.67
NKX2-1-201ENST00000354822 LOC105371267A0A1B0GV96 52 aa19.25■□□□□ 0.67
NKX2-1-201ENST00000354822 SFTPBP07988 381 aa19.25■□□□□ 0.67
NKX2-1-201ENST00000354822 ZNF806P0C7X5 589 aa19.25■□□□□ 0.67
NKX2-1-201ENST00000354822 ZNF728P0DKX0 622 aa19.25■□□□□ 0.67
NKX2-1-201ENST00000354822 TFAP2EQ6VUC0 442 aa19.25■□□□□ 0.67
NKX2-1-201ENST00000354822 TUSC5Q8IXB3 177 aa19.25■□□□□ 0.67
NKX2-1-201ENST00000354822 Q8NFD4 153 aa19.25■□□□□ 0.67
NKX2-1-201ENST00000354822 ADAMTS17Q8TE56 1095 aa19.25■□□□□ 0.67
NKX2-1-201ENST00000354822 LDAHQ9H6V9 325 aa19.25■□□□□ 0.67
NKX2-1-201ENST00000354822 NUDT19A8MXV4 375 aa19.24■□□□□ 0.67
NKX2-1-201ENST00000354822 PRSS44E7EML9 344 aa19.24■□□□□ 0.67
NKX2-1-201ENST00000354822 FUT3P21217 361 aa19.24■□□□□ 0.67
NKX2-1-201ENST00000354822 RBM11P57052 281 aaKnown RBP19.24■□□□□ 0.67
NKX2-1-201ENST00000354822 IAH1Q2TAA2 248 aaPredicted RBP19.24■□□□□ 0.67
NKX2-1-201ENST00000354822 ZNF585AQ6P3V2 769 aa19.24■□□□□ 0.67
NKX2-1-201ENST00000354822 CNTNAP3BQ96NU0 1288 aa19.24■□□□□ 0.67
NKX2-1-201ENST00000354822 REPIN1Q9BWE0 567 aaKnown RBP19.24■□□□□ 0.67
NKX2-1-201ENST00000354822 CNTNAP3Q9BZ76 1288 aa19.24■□□□□ 0.67
NKX2-1-201ENST00000354822 PRRG4Q9BZD6 226 aa19.24■□□□□ 0.67
NKX2-1-201ENST00000354822 COQ3Q9NZJ6 369 aa19.24■□□□□ 0.67
NKX2-1-201ENST00000354822 TUBD1Q9UJT1 453 aa19.24■□□□□ 0.67
NKX2-1-201ENST00000354822 FAM90A10PA6NDY2 464 aa19.23■□□□□ 0.67
NKX2-1-201ENST00000354822 FAM90A18PA6NE21 464 aa19.23■□□□□ 0.67
NKX2-1-201ENST00000354822 FAM90A16PA6NEW6 464 aa19.23■□□□□ 0.67
NKX2-1-201ENST00000354822 FAM90A20PA6NIJ5 464 aa19.23■□□□□ 0.67
NKX2-1-201ENST00000354822 FAM90A8PA6NJQ4 464 aa19.23■□□□□ 0.67
NKX2-1-201ENST00000354822 FAM90A7PA6NKC0 464 aa19.23■□□□□ 0.67
NKX2-1-201ENST00000354822 FAM90A22PA8MWA6 464 aa19.23■□□□□ 0.67
NKX2-1-201ENST00000354822 FAM90A12PA8MX19 464 aa19.23■□□□□ 0.67
NKX2-1-201ENST00000354822 FAM90A5PA8MXJ8 464 aa19.23■□□□□ 0.67
NKX2-1-201ENST00000354822 FAM90A23PA8MXZ1 464 aa19.23■□□□□ 0.67
NKX2-1-201ENST00000354822 TPD52L2O43399 206 aaKnown RBP19.23■□□□□ 0.67
NKX2-1-201ENST00000354822 CELA3AP09093 270 aa19.23■□□□□ 0.67
NKX2-1-201ENST00000354822 FAM90A15PP0C7V4 464 aa19.23■□□□□ 0.67
NKX2-1-201ENST00000354822 FAM90A13PP0C7W8 464 aa19.23■□□□□ 0.67
NKX2-1-201ENST00000354822 FAM90A14PP0C7W9 464 aa19.23■□□□□ 0.67
NKX2-1-201ENST00000354822 FAM90A24PP0C7X0 464 aa19.23■□□□□ 0.67
NKX2-1-201ENST00000354822 RFC3P40938 356 aa19.23■□□□□ 0.67
NKX2-1-201ENST00000354822 PIGPP57054 158 aa19.23■□□□□ 0.67
NKX2-1-201ENST00000354822 BTN1A1Q13410 526 aa19.23■□□□□ 0.67
NKX2-1-201ENST00000354822 ABCA11PQ4W5N1 156 aa19.23■□□□□ 0.67
NKX2-1-201ENST00000354822 GALNT14Q96FL9 552 aa19.23■□□□□ 0.67
NKX2-1-201ENST00000354822 CALHM2Q9HA72 323 aa19.23■□□□□ 0.67
NKX2-1-201ENST00000354822 TMEM9BQ9NQ34 198 aa19.23■□□□□ 0.67
NKX2-1-201ENST00000354822 PCDHB10Q9UN67 800 aa19.23■□□□□ 0.67
NKX2-1-201ENST00000354822 MAGEA5P43359 124 aa19.23■□□□□ 0.67
NKX2-1-201ENST00000354822 S100A10P60903 97 aa19.23■□□□□ 0.67
NKX2-1-201ENST00000354822 SMCO1Q147U7 214 aa19.23■□□□□ 0.67
NKX2-1-201ENST00000354822 ZNF611Q8N823 705 aa19.23■□□□□ 0.67
NKX2-1-201ENST00000354822 SLC5A7Q9GZV3 580 aa19.23■□□□□ 0.67
NKX2-1-201ENST00000354822 C12orf4Q9NQ89 552 aa19.23■□□□□ 0.67
NKX2-1-201ENST00000354822 FRYLO94915 3013 aa19.22■□□□□ 0.67
NKX2-1-201ENST00000354822 MSGN1A6NI15 193 aa19.22■□□□□ 0.67
NKX2-1-201ENST00000354822 CDK2AP1O14519 115 aa19.22■□□□□ 0.67
NKX2-1-201ENST00000354822 CD79AP11912 226 aa19.22■□□□□ 0.67
NKX2-1-201ENST00000354822 UCP3P55916 312 aa19.22■□□□□ 0.67
NKX2-1-201ENST00000354822 PLGLB1Q02325 96 aa19.22■□□□□ 0.67
NKX2-1-201ENST00000354822 EIF5AL1Q6IS14 154 aaKnown RBP19.22■□□□□ 0.67
NKX2-1-201ENST00000354822 SAXO1Q8IYX7 474 aa19.22■□□□□ 0.67
NKX2-1-201ENST00000354822 MICU1Q9BPX6 476 aa19.22■□□□□ 0.67
NKX2-1-201ENST00000354822 SYT3Q9BQG1 590 aa19.22■□□□□ 0.67
NKX2-1-201ENST00000354822 LIME1Q9H400 295 aa19.22■□□□□ 0.67
NKX2-1-201ENST00000354822 ZNF581Q9P0T4 197 aa19.22■□□□□ 0.67
NKX2-1-201ENST00000354822 APOC3P02656 99 aa19.22■□□□□ 0.67
NKX2-1-201ENST00000354822 ARR3P36575 388 aa19.22■□□□□ 0.67
NKX2-1-201ENST00000354822 RNPS1Q15287 305 aaKnown RBP19.22■□□□□ 0.67
NKX2-1-201ENST00000354822 SLC22A25Q6T423 547 aa19.22■□□□□ 0.67
NKX2-1-201ENST00000354822 TMEM251Q8N6I4 163 aa19.22■□□□□ 0.67
NKX2-1-201ENST00000354822 BHLHE23Q8NDY6 225 aa19.22■□□□□ 0.67
NKX2-1-201ENST00000354822 OR1S2Q8NGQ3 325 aa19.22■□□□□ 0.67
NKX2-1-201ENST00000354822 APOBEC3DQ96AK3 386 aaPredicted RBP19.22■□□□□ 0.67
NKX2-1-201ENST00000354822 SUCNR1Q9BXA5 334 aa19.22■□□□□ 0.67
NKX2-1-201ENST00000354822 HES7Q9BYE0 225 aa19.22■□□□□ 0.67
NKX2-1-201ENST00000354822 NAA60Q9H7X0 242 aa19.22■□□□□ 0.67
NKX2-1-201ENST00000354822 DMDP11532 3685 aa19.21■□□□□ 0.67
NKX2-1-201ENST00000354822 FAM166BA8MTA8 275 aa19.21■□□□□ 0.67
NKX2-1-201ENST00000354822 SLC25A26Q70HW3 274 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms