RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 TRIM77I1YAP6 450 aa19.15■□□□□ 0.66
UPF3A-201ENST00000351487 NEURL1O76050 574 aa19.15■□□□□ 0.66
UPF3A-201ENST00000351487 SPINK14Q6IE38 97 aa19.15■□□□□ 0.66
UPF3A-201ENST00000351487 ADAMTS17Q8TE56 1095 aa19.15■□□□□ 0.66
UPF3A-201ENST00000351487 ARL11Q969Q4 196 aa19.15■□□□□ 0.66
UPF3A-201ENST00000351487 POM121Q96HA1 1249 aa19.15■□□□□ 0.66
UPF3A-201ENST00000351487 ST3GAL6Q9Y274 331 aa19.15■□□□□ 0.66
UPF3A-201ENST00000351487 NOSIPQ9Y314 301 aaKnown RBP19.15■□□□□ 0.66
UPF3A-201ENST00000351487 F10P00742 488 aa19.15■□□□□ 0.66
UPF3A-201ENST00000351487 ATF4P18848 351 aaPredicted RBP19.15■□□□□ 0.66
UPF3A-201ENST00000351487 PIGPP57054 158 aa19.15■□□□□ 0.66
UPF3A-201ENST00000351487 CPEB3Q8NE35 698 aaKnown RBP19.15■□□□□ 0.66
UPF3A-201ENST00000351487 OR2M7Q8NG81 312 aa19.15■□□□□ 0.66
UPF3A-201ENST00000351487 GALNT14Q96FL9 552 aa19.15■□□□□ 0.66
UPF3A-201ENST00000351487 C9orf172C9J069 976 aa19.14■□□□□ 0.65
UPF3A-201ENST00000351487 ZNF587BE7ETH6 402 aa19.14■□□□□ 0.65
UPF3A-201ENST00000351487 PDCD6O75340 191 aa19.14■□□□□ 0.65
UPF3A-201ENST00000351487 MRPL33O75394 65 aaKnown RBP19.14■□□□□ 0.65
UPF3A-201ENST00000351487 HKR1P10072 659 aa19.14■□□□□ 0.65
UPF3A-201ENST00000351487 PMELP40967 661 aa19.14■□□□□ 0.65
UPF3A-201ENST00000351487 RBM11P57052 281 aaKnown RBP19.14■□□□□ 0.65
UPF3A-201ENST00000351487 EIF5AP63241 154 aaKnown RBP19.14■□□□□ 0.65
UPF3A-201ENST00000351487 FAM219AQ8IW50 185 aa19.14■□□□□ 0.65
UPF3A-201ENST00000351487 TMEM218A2RU14 115 aa19.13■□□□□ 0.65
UPF3A-201ENST00000351487 IFNA21P01568 189 aa19.13■□□□□ 0.65
UPF3A-201ENST00000351487 JMJD7P0C870 316 aa19.13■□□□□ 0.65
UPF3A-201ENST00000351487 ZNF728P0DKX0 622 aa19.13■□□□□ 0.65
UPF3A-201ENST00000351487 LHX2P50458 406 aa19.13■□□□□ 0.65
UPF3A-201ENST00000351487 GGNBP1Q5YKI7 109 aa19.13■□□□□ 0.65
UPF3A-201ENST00000351487 PIGCQ92535 297 aa19.13■□□□□ 0.65
UPF3A-201ENST00000351487 MARS2Q96GW9 593 aaKnown RBP19.13■□□□□ 0.65
UPF3A-201ENST00000351487 NARS2Q96I59 477 aaKnown RBP19.13■□□□□ 0.65
UPF3A-201ENST00000351487 SIGLEC5O15389 551 aa19.13■□□□□ 0.65
UPF3A-201ENST00000351487 DEDDO75618 318 aa19.13■□□□□ 0.65
UPF3A-201ENST00000351487 DEFA5Q01523 94 aa19.13■□□□□ 0.65
UPF3A-201ENST00000351487 BOLLQ8N9W6 283 aaKnown RBP19.13■□□□□ 0.65
UPF3A-201ENST00000351487 DYRK2Q92630 601 aa19.13■□□□□ 0.65
UPF3A-201ENST00000351487 NAA60Q9H7X0 242 aa19.13■□□□□ 0.65
UPF3A-201ENST00000351487 ZNF286AQ9HBT8 521 aa19.13■□□□□ 0.65
UPF3A-201ENST00000351487 B4GALT7Q9UBV7 327 aa19.13■□□□□ 0.65
UPF3A-201ENST00000351487 LPAR3Q9UBY5 353 aa19.13■□□□□ 0.65
UPF3A-201ENST00000351487 KCNIP3Q9Y2W7 256 aa19.13■□□□□ 0.65
UPF3A-201ENST00000351487 RPL36A-HNRNPH2H7BZ11 118 aa19.12■□□□□ 0.65
UPF3A-201ENST00000351487 DNASE2O00115 360 aaPredicted RBP19.12■□□□□ 0.65
UPF3A-201ENST00000351487 ACTL6AO96019 429 aa19.12■□□□□ 0.65
UPF3A-201ENST00000351487 MPLP40238 635 aa19.12■□□□□ 0.65
UPF3A-201ENST00000351487 CLDN18P56856 261 aa19.12■□□□□ 0.65
UPF3A-201ENST00000351487 SPEM2Q0P670 501 aa19.12■□□□□ 0.65
UPF3A-201ENST00000351487 Q8NFD4 153 aa19.12■□□□□ 0.65
UPF3A-201ENST00000351487 MRPL24Q96A35 216 aaKnown RBP19.12■□□□□ 0.65
UPF3A-201ENST00000351487 C12orf4Q9NQ89 552 aa19.12■□□□□ 0.65
UPF3A-201ENST00000351487 MMP26Q9NRE1 261 aa19.12■□□□□ 0.65
UPF3A-201ENST00000351487 SLC7A10Q9NS82 523 aa19.12■□□□□ 0.65
UPF3A-201ENST00000351487 PARPBPQ9NWS1 579 aa19.12■□□□□ 0.65
UPF3A-201ENST00000351487 ATG12O94817 140 aa19.12■□□□□ 0.65
UPF3A-201ENST00000351487 IGHV3-9P01782 118 aa19.12■□□□□ 0.65
UPF3A-201ENST00000351487 MALLQ13021 153 aa19.12■□□□□ 0.65
UPF3A-201ENST00000351487 TMEM187Q14656 261 aa19.12■□□□□ 0.65
UPF3A-201ENST00000351487 DAZAP2Q15038 168 aaPredicted RBP19.12■□□□□ 0.65
UPF3A-201ENST00000351487 SLC22A25Q6T423 547 aa19.12■□□□□ 0.65
UPF3A-201ENST00000351487 CALHM1Q8IU99 346 aa19.12■□□□□ 0.65
UPF3A-201ENST00000351487 LRTM2Q8N967 370 aa19.12■□□□□ 0.65
UPF3A-201ENST00000351487 TOMM40LQ969M1 308 aa19.12■□□□□ 0.65
UPF3A-201ENST00000351487 SAT2Q96F10 170 aaPredicted RBP19.12■□□□□ 0.65
UPF3A-201ENST00000351487 SIGLEC12Q96PQ1 595 aa19.12■□□□□ 0.65
UPF3A-201ENST00000351487 MST1LQ2TV78 715 aa19.11■□□□□ 0.65
UPF3A-201ENST00000351487 IL34Q6ZMJ4 242 aa19.11■□□□□ 0.65
UPF3A-201ENST00000351487 TMEM200AQ86VY9 491 aa19.11■□□□□ 0.65
UPF3A-201ENST00000351487 ZNF611Q8N823 705 aa19.11■□□□□ 0.65
UPF3A-201ENST00000351487 RTN4IP1Q8WWV3 396 aaPredicted RBP19.11■□□□□ 0.65
UPF3A-201ENST00000351487 NKX6-2Q9C056 277 aaPredicted RBP19.11■□□□□ 0.65
UPF3A-201ENST00000351487 OR2S2Q9NQN1 319 aa19.11■□□□□ 0.65
UPF3A-201ENST00000351487 FREM1Q5H8C1 2179 aa19.11■□□□□ 0.65
UPF3A-201ENST00000351487 UCP3P55916 312 aa19.1■□□□□ 0.65
UPF3A-201ENST00000351487 ARF1P84077 181 aaKnown RBP19.1■□□□□ 0.65
UPF3A-201ENST00000351487 SMCO1Q147U7 214 aa19.1■□□□□ 0.65
UPF3A-201ENST00000351487 ABCA11PQ4W5N1 156 aa19.1■□□□□ 0.65
UPF3A-201ENST00000351487 ABHD17BQ5VST6 288 aa19.1■□□□□ 0.65
UPF3A-201ENST00000351487 TMEM211Q6ICI0 200 aa19.1■□□□□ 0.65
UPF3A-201ENST00000351487 EIF5AL1Q6IS14 154 aaKnown RBP19.1■□□□□ 0.65
UPF3A-201ENST00000351487 NAXEQ8NCW5 288 aa19.1■□□□□ 0.65
UPF3A-201ENST00000351487 MOB3AQ96BX8 217 aa19.1■□□□□ 0.65
UPF3A-201ENST00000351487 SUCNR1Q9BXA5 334 aa19.1■□□□□ 0.65
UPF3A-201ENST00000351487 TNRC6AQ8NDV7 1962 aaKnown RBP19.1■□□□□ 0.65
UPF3A-201ENST00000351487 K7EPK0 472 aa19.1■□□□□ 0.65
UPF3A-201ENST00000351487 GAPDHP04406 335 aaKnown RBP19.1■□□□□ 0.65
UPF3A-201ENST00000351487 FUT3P21217 361 aa19.1■□□□□ 0.65
UPF3A-201ENST00000351487 RPL12P30050 165 aaKnown RBP19.1■□□□□ 0.65
UPF3A-201ENST00000351487 CCDC157Q569K6 752 aa19.1■□□□□ 0.65
UPF3A-201ENST00000351487 RPL7L1Q6DKI1 246 aaKnown RBP19.1■□□□□ 0.65
UPF3A-201ENST00000351487 BRICD5Q6PL45 260 aa19.1■□□□□ 0.65
UPF3A-201ENST00000351487 Q6ZPA2 131 aa19.1■□□□□ 0.65
UPF3A-201ENST00000351487 FAM71E2Q8N5Q1 922 aa19.1■□□□□ 0.65
UPF3A-201ENST00000351487 SMIM8Q96KF7 97 aa19.1■□□□□ 0.65
UPF3A-201ENST00000351487 PRRX2Q99811 253 aa19.1■□□□□ 0.65
UPF3A-201ENST00000351487 GPR87Q9BY21 358 aa19.1■□□□□ 0.65
UPF3A-201ENST00000351487 SLC2A9Q9NRM0 540 aa19.1■□□□□ 0.65
UPF3A-201ENST00000351487 FOXJ2Q9P0K8 574 aa19.1■□□□□ 0.65
UPF3A-201ENST00000351487 FAM90A10PA6NDY2 464 aa19.09■□□□□ 0.65
UPF3A-201ENST00000351487 FAM90A18PA6NE21 464 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms