RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 NHLH2Q02577 135 aa15.7■□□□□ 0.1
PTP4A3-202ENST00000349124 TMEM187Q14656 261 aa15.7■□□□□ 0.1
PTP4A3-202ENST00000349124 NSUN5P2Q63ZY6 315 aa15.7■□□□□ 0.1
PTP4A3-202ENST00000349124 OPN5Q6U736 354 aa15.7■□□□□ 0.1
PTP4A3-202ENST00000349124 CLCC1Q96S66 551 aa15.7■□□□□ 0.1
PTP4A3-202ENST00000349124 GPHA2Q96T91 129 aa15.7■□□□□ 0.1
PTP4A3-202ENST00000349124 SH3BGRL3Q9H299 93 aa15.7■□□□□ 0.1
PTP4A3-202ENST00000349124 ZDHHC8Q9ULC8 765 aa15.7■□□□□ 0.1
PTP4A3-202ENST00000349124 IGHV3-9P01782 118 aa15.7■□□□□ 0.1
PTP4A3-202ENST00000349124 SMCO1Q147U7 214 aa15.7■□□□□ 0.1
PTP4A3-202ENST00000349124 EIF5AL1Q6IS14 154 aaKnown RBP15.7■□□□□ 0.1
PTP4A3-202ENST00000349124 SLC22A25Q6T423 547 aa15.7■□□□□ 0.1
PTP4A3-202ENST00000349124 C20orf24Q9BUV8 137 aa15.7■□□□□ 0.1
PTP4A3-202ENST00000349124 DECR2Q9NUI1 292 aa15.7■□□□□ 0.1
PTP4A3-202ENST00000349124 P4HTMQ9NXG6 502 aa15.7■□□□□ 0.1
PTP4A3-202ENST00000349124 CHATP28329 748 aa15.69■□□□□ 0.1
PTP4A3-202ENST00000349124 ZNF133P52736 654 aaPredicted RBP15.69■□□□□ 0.1
PTP4A3-202ENST00000349124 Q6ZSR3 168 aa15.69■□□□□ 0.1
PTP4A3-202ENST00000349124 NAA11Q9BSU3 229 aaPredicted RBP15.69■□□□□ 0.1
PTP4A3-202ENST00000349124 WNT16Q9UBV4 365 aa15.69■□□□□ 0.1
PTP4A3-202ENST00000349124 FAM186AA6NE01 2351 aa15.69■□□□□ 0.1
PTP4A3-202ENST00000349124 JTBO76095 146 aa15.69■□□□□ 0.1
PTP4A3-202ENST00000349124 RFPL3SP0C7P2 107 aa15.69■□□□□ 0.1
PTP4A3-202ENST00000349124 SSR4P51571 173 aa15.69■□□□□ 0.1
PTP4A3-202ENST00000349124 MRPS34P82930 218 aaKnown RBP15.69■□□□□ 0.1
PTP4A3-202ENST00000349124 ZNF616Q08AN1 781 aa15.69■□□□□ 0.1
PTP4A3-202ENST00000349124 ABCA11PQ4W5N1 156 aa15.69■□□□□ 0.1
PTP4A3-202ENST00000349124 RPS19BP1Q86WX3 136 aaKnown RBP15.69■□□□□ 0.1
PTP4A3-202ENST00000349124 BORCS8Q96FH0 119 aa15.69■□□□□ 0.1
PTP4A3-202ENST00000349124 C12orf57Q99622 126 aa15.69■□□□□ 0.1
PTP4A3-202ENST00000349124 DUSP23Q9BVJ7 150 aa15.69■□□□□ 0.1
PTP4A3-202ENST00000349124 LOC102723996A0A087X1L8 192 aa15.68■□□□□ 0.1
PTP4A3-202ENST00000349124 VAMP5O95183 116 aa15.68■□□□□ 0.1
PTP4A3-202ENST00000349124 FKBP2P26885 142 aaKnown RBP15.68■□□□□ 0.1
PTP4A3-202ENST00000349124 ZNF92Q03936 586 aa15.68■□□□□ 0.1
PTP4A3-202ENST00000349124 MIDNQ504T8 468 aa15.68■□□□□ 0.1
PTP4A3-202ENST00000349124 AVPI1Q5T686 147 aa15.68■□□□□ 0.1
PTP4A3-202ENST00000349124 OR1F12Q8NHA8 337 aa15.68■□□□□ 0.1
PTP4A3-202ENST00000349124 NAA60Q9H7X0 242 aa15.68■□□□□ 0.1
PTP4A3-202ENST00000349124 PARP11Q9NR21 331 aa15.68■□□□□ 0.1
PTP4A3-202ENST00000349124 NECAP2Q9NVZ3 263 aa15.68■□□□□ 0.1
PTP4A3-202ENST00000349124 CACFD1Q9UGQ2 172 aa15.68■□□□□ 0.1
PTP4A3-202ENST00000349124 A0A087WZY1 265 aa15.68■□□□□ 0.1
PTP4A3-202ENST00000349124 ZNF587BE7ETH6 402 aa15.68■□□□□ 0.1
PTP4A3-202ENST00000349124 NRASP01111 189 aa15.68■□□□□ 0.1
PTP4A3-202ENST00000349124 NR2C1P13056 603 aa15.68■□□□□ 0.1
PTP4A3-202ENST00000349124 SPINK2P20155 84 aa15.68■□□□□ 0.1
PTP4A3-202ENST00000349124 HTR5AP47898 357 aa15.68■□□□□ 0.1
PTP4A3-202ENST00000349124 HOXA1P49639 335 aaPredicted RBP15.68■□□□□ 0.1
PTP4A3-202ENST00000349124 RBP2P50120 134 aa15.68■□□□□ 0.1
PTP4A3-202ENST00000349124 EIF5AP63241 154 aaKnown RBP15.68■□□□□ 0.1
PTP4A3-202ENST00000349124 PSG4Q00888 419 aa15.68■□□□□ 0.1
PTP4A3-202ENST00000349124 SWI5Q1ZZU3 235 aa15.68■□□□□ 0.1
PTP4A3-202ENST00000349124 SLC23A3Q6PIS1 610 aa15.68■□□□□ 0.1
PTP4A3-202ENST00000349124 ISOC2Q96AB3 205 aa15.68■□□□□ 0.1
PTP4A3-202ENST00000349124 IP6K3Q96PC2 410 aa15.68■□□□□ 0.1
PTP4A3-202ENST00000349124 SLC2A9Q9NRM0 540 aa15.68■□□□□ 0.1
PTP4A3-202ENST00000349124 ST3GAL6Q9Y274 331 aa15.68■□□□□ 0.1
PTP4A3-202ENST00000349124 KCNIP3Q9Y2W7 256 aa15.68■□□□□ 0.1
PTP4A3-202ENST00000349124 CA11O75493 328 aa15.67■□□□□ 0.1
PTP4A3-202ENST00000349124 SUCLG1P53597 346 aaKnown RBP15.67■□□□□ 0.1
PTP4A3-202ENST00000349124 RAC1P63000 192 aa15.67■□□□□ 0.1
PTP4A3-202ENST00000349124 LYSMD4Q5XG99 296 aa15.67■□□□□ 0.1
PTP4A3-202ENST00000349124 HSD17B11Q8NBQ5 300 aa15.67■□□□□ 0.1
PTP4A3-202ENST00000349124 IFI44Q8TCB0 444 aa15.67■□□□□ 0.1
PTP4A3-202ENST00000349124 PIGCQ92535 297 aa15.67■□□□□ 0.1
PTP4A3-202ENST00000349124 C14orf79Q96F83 325 aa15.67■□□□□ 0.1
PTP4A3-202ENST00000349124 URB1O60287 2271 aaKnown RBP15.67■□□□□ 0.1
PTP4A3-202ENST00000349124 CXCL13O43927 109 aa15.67■□□□□ 0.1
PTP4A3-202ENST00000349124 NPBWR2P48146 333 aa15.67■□□□□ 0.1
PTP4A3-202ENST00000349124 RGS19P49795 217 aa15.67■□□□□ 0.1
PTP4A3-202ENST00000349124 DVL1P1P54792 670 aaPredicted RBP15.67■□□□□ 0.1
PTP4A3-202ENST00000349124 RPS18P62269 152 aaKnown RBP15.67■□□□□ 0.1
PTP4A3-202ENST00000349124 ARL6IP1Q15041 203 aa15.67■□□□□ 0.1
PTP4A3-202ENST00000349124 MEX3BQ6ZN04 569 aaKnown RBP15.67■□□□□ 0.1
PTP4A3-202ENST00000349124 CALHM1Q8IU99 346 aa15.67■□□□□ 0.1
PTP4A3-202ENST00000349124 COA4Q9NYJ1 87 aa15.67■□□□□ 0.1
PTP4A3-202ENST00000349124 PPA1Q15181 289 aa15.67■□□□□ 0.1
PTP4A3-202ENST00000349124 IGSF11Q5DX21 431 aa15.67■□□□□ 0.1
PTP4A3-202ENST00000349124 SPSB1Q96BD6 273 aa15.67■□□□□ 0.1
PTP4A3-202ENST00000349124 RPS10P5Q9NQ39 176 aa15.67■□□□□ 0.1
PTP4A3-202ENST00000349124 TSPAN15O95858 294 aa15.66■□□□□ 0.1
PTP4A3-202ENST00000349124 GAPDHP04406 335 aaKnown RBP15.66■□□□□ 0.1
PTP4A3-202ENST00000349124 KLK3P07288 261 aaPredicted RBP15.66■□□□□ 0.1
PTP4A3-202ENST00000349124 SNRNP70P08621 437 aaKnown RBP15.66■□□□□ 0.1
PTP4A3-202ENST00000349124 CARD18P57730 90 aa15.66■□□□□ 0.1
PTP4A3-202ENST00000349124 DAZAP2Q15038 168 aaPredicted RBP15.66■□□□□ 0.1
PTP4A3-202ENST00000349124 RAB35Q15286 201 aa15.66■□□□□ 0.1
PTP4A3-202ENST00000349124 MSI2Q96DH6 328 aaKnown RBP15.66■□□□□ 0.1
PTP4A3-202ENST00000349124 TP53RKQ96S44 253 aa15.66■□□□□ 0.1
PTP4A3-202ENST00000349124 SCRT1Q9BWW7 348 aa15.66■□□□□ 0.1
PTP4A3-202ENST00000349124 SH2D2AQ9NP31 389 aa15.66■□□□□ 0.1
PTP4A3-202ENST00000349124 TMEM38BQ9NVV0 291 aa15.66■□□□□ 0.1
PTP4A3-202ENST00000349124 EDARQ9UNE0 448 aa15.66■□□□□ 0.1
PTP4A3-202ENST00000349124 RCL1Q9Y2P8 373 aaKnown RBP15.66■□□□□ 0.1
PTP4A3-202ENST00000349124 C3orf80F5H4A9 247 aa15.66■□□□□ 0.1
PTP4A3-202ENST00000349124 SLC33A1O00400 549 aaPredicted RBP15.66■□□□□ 0.1
PTP4A3-202ENST00000349124 PHF1O43189 567 aaPredicted RBP15.66■□□□□ 0.1
PTP4A3-202ENST00000349124 FGF5P12034 268 aa15.66■□□□□ 0.1
PTP4A3-202ENST00000349124 CBR1P16152 277 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms