RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 ESM1Q9NQ30 184 aa12.68□□□□□ -0.38
VAPA-201ENST00000340541 BABAM2Q9NXR7 383 aa12.68□□□□□ -0.38
VAPA-201ENST00000340541 TOX4O94842 621 aa12.67□□□□□ -0.38
VAPA-201ENST00000340541 KNG1P01042 644 aa12.67□□□□□ -0.38
VAPA-201ENST00000340541 RPSAP08865 295 aaKnown RBP12.67□□□□□ -0.38
VAPA-201ENST00000340541 C21orf33P30042 268 aaPredicted RBP12.67□□□□□ -0.38
VAPA-201ENST00000340541 PRDX2P32119 198 aa12.67□□□□□ -0.38
VAPA-201ENST00000340541 ATP1B3P54709 279 aa12.67□□□□□ -0.38
VAPA-201ENST00000340541 MTCP1P56278 107 aa12.67□□□□□ -0.38
VAPA-201ENST00000340541 AWAT1Q58HT5 328 aa12.67□□□□□ -0.38
VAPA-201ENST00000340541 AHSA2Q719I0 299 aa12.67□□□□□ -0.38
VAPA-201ENST00000340541 BPIFB6Q8NFQ5 453 aa12.67□□□□□ -0.38
VAPA-201ENST00000340541 GATAD2BQ8WXI9 593 aa12.67□□□□□ -0.38
VAPA-201ENST00000340541 OPALINQ96PE5 141 aa12.67□□□□□ -0.38
VAPA-201ENST00000340541 ZNF747Q9BV97 191 aa12.67□□□□□ -0.38
VAPA-201ENST00000340541 ZCCHC4Q9H5U6 513 aa12.67□□□□□ -0.38
VAPA-201ENST00000340541 KPTNQ9Y664 436 aa12.67□□□□□ -0.38
VAPA-201ENST00000340541 IGKV1-12A0A0C4DH73 117 aa12.66□□□□□ -0.38
VAPA-201ENST00000340541 CENPVL3A0A0U1RRI6 287 aa12.66□□□□□ -0.38
VAPA-201ENST00000340541 ALX3O95076 343 aa12.66□□□□□ -0.38
VAPA-201ENST00000340541 IGKV1D-12P01611 117 aa12.66□□□□□ -0.38
VAPA-201ENST00000340541 HKR1P10072 659 aa12.66□□□□□ -0.38
VAPA-201ENST00000340541 NPBWR2P48146 333 aa12.66□□□□□ -0.38
VAPA-201ENST00000340541 METTL11BQ5VVY1 283 aa12.66□□□□□ -0.38
VAPA-201ENST00000340541 DMKNQ6E0U4 476 aaPredicted RBP12.66□□□□□ -0.38
VAPA-201ENST00000340541 ZNF529Q6P280 563 aa12.66□□□□□ -0.38
VAPA-201ENST00000340541 SHISA2Q6UWI4 295 aa12.66□□□□□ -0.38
VAPA-201ENST00000340541 LHFPL2Q6ZUX7 228 aa12.66□□□□□ -0.38
VAPA-201ENST00000340541 SERPINA12Q8IW75 414 aa12.66□□□□□ -0.38
VAPA-201ENST00000340541 ZNF561Q8N587 486 aa12.66□□□□□ -0.38
VAPA-201ENST00000340541 Q8N7P7 452 aa12.66□□□□□ -0.38
VAPA-201ENST00000340541 SIGLECL1Q8N7X8 197 aa12.66□□□□□ -0.38
VAPA-201ENST00000340541 TMEM185AQ8NFB2 350 aa12.66□□□□□ -0.38
VAPA-201ENST00000340541 H1FXQ92522 213 aaKnown RBP12.66□□□□□ -0.38
VAPA-201ENST00000340541 SMIM19Q96E16 107 aa12.66□□□□□ -0.38
VAPA-201ENST00000340541 SPACA5Q96QH8 159 aa12.66□□□□□ -0.38
VAPA-201ENST00000340541 IL36RNQ9UBH0 155 aa12.66□□□□□ -0.38
VAPA-201ENST00000340541 DHDHQ9UQ10 334 aa12.66□□□□□ -0.38
VAPA-201ENST00000340541 SULT1B1O43704 296 aa12.65□□□□□ -0.38
VAPA-201ENST00000340541 ZNF737O75373 536 aa12.65□□□□□ -0.38
VAPA-201ENST00000340541 INMTO95050 263 aa12.65□□□□□ -0.38
VAPA-201ENST00000340541 NDUFB7P17568 137 aa12.65□□□□□ -0.38
VAPA-201ENST00000340541 PRTN3P24158 256 aa12.65□□□□□ -0.38
VAPA-201ENST00000340541 SOX2P48431 317 aa12.65□□□□□ -0.38
VAPA-201ENST00000340541 POU3F4P49335 361 aa12.65□□□□□ -0.38
VAPA-201ENST00000340541 PDZK1IP1Q13113 114 aa12.65□□□□□ -0.38
VAPA-201ENST00000340541 C6orf141Q5SZD1 244 aa12.65□□□□□ -0.38
VAPA-201ENST00000340541 BRD3OSQ6XYD6 125 aa12.65□□□□□ -0.38
VAPA-201ENST00000340541 KIR3DL3Q8N743 410 aa12.65□□□□□ -0.38
VAPA-201ENST00000340541 OR5D14Q8NGL3 314 aa12.65□□□□□ -0.38
VAPA-201ENST00000340541 GPR148Q8TDV2 347 aa12.65□□□□□ -0.38
VAPA-201ENST00000340541 TSEN15Q8WW01 171 aaKnown RBP12.65□□□□□ -0.38
VAPA-201ENST00000340541 RFT1Q96AA3 541 aa12.65□□□□□ -0.38
VAPA-201ENST00000340541 PGLYRP3Q96LB9 341 aa12.65□□□□□ -0.38
VAPA-201ENST00000340541 C1orf147Q96MC9 270 aaPredicted RBP12.65□□□□□ -0.38
VAPA-201ENST00000340541 MS4A7Q9GZW8 240 aaPredicted RBP12.65□□□□□ -0.38
VAPA-201ENST00000340541 ZNF696Q9H7X3 374 aa12.65□□□□□ -0.38
VAPA-201ENST00000340541 C19orf12Q9NSK7 152 aa12.65□□□□□ -0.38
VAPA-201ENST00000340541 RBFOX1Q9NWB1 397 aaKnown RBP12.65□□□□□ -0.38
VAPA-201ENST00000340541 OR14J1Q9UGF5 321 aa12.65□□□□□ -0.38
VAPA-201ENST00000340541 TRBV23-1A0A0A0MS06 115 aa12.64□□□□□ -0.39
VAPA-201ENST00000340541 SLC1A7O00341 560 aa12.64□□□□□ -0.39
VAPA-201ENST00000340541 ANGPTL7O43827 346 aa12.64□□□□□ -0.39
VAPA-201ENST00000340541 BCL3P20749 454 aa12.64□□□□□ -0.39
VAPA-201ENST00000340541 ZP1P60852 638 aa12.64□□□□□ -0.39
VAPA-201ENST00000340541 RPS11P62280 158 aaKnown RBP eCLIP12.64□□□□□ -0.39
VAPA-201ENST00000340541 MED21Q13503 144 aa12.64□□□□□ -0.39
VAPA-201ENST00000340541 PDCD1Q15116 288 aa12.64□□□□□ -0.39
VAPA-201ENST00000340541 PRR31Q5SQ13 230 aa12.64□□□□□ -0.39
VAPA-201ENST00000340541 GPR157Q5UAW9 335 aa12.64□□□□□ -0.39
VAPA-201ENST00000340541 RUSC1-AS1Q66K80 236 aa12.64□□□□□ -0.39
VAPA-201ENST00000340541 VMO1Q7Z5L0 202 aa12.64□□□□□ -0.39
VAPA-201ENST00000340541 MKXQ8IYA7 352 aa12.64□□□□□ -0.39
VAPA-201ENST00000340541 NANOGP1Q8N7R0 232 aa12.64□□□□□ -0.39
VAPA-201ENST00000340541 ZFP41Q8N8Y5 198 aa12.64□□□□□ -0.39
VAPA-201ENST00000340541 OR51A2Q8NGJ7 313 aa12.64□□□□□ -0.39
VAPA-201ENST00000340541 OR13C5Q8NGS8 318 aa12.64□□□□□ -0.39
VAPA-201ENST00000340541 SGCDQ92629 289 aa12.64□□□□□ -0.39
VAPA-201ENST00000340541 GHSRQ92847 366 aa12.64□□□□□ -0.39
VAPA-201ENST00000340541 ANKRD60Q9BZ19 345 aa12.64□□□□□ -0.39
VAPA-201ENST00000340541 PRDM13Q9H4Q3 707 aa12.64□□□□□ -0.39
VAPA-201ENST00000340541 SEBOXQ9HB31 216 aaPredicted RBP12.64□□□□□ -0.39
VAPA-201ENST00000340541 PAK1IP1Q9NWT1 392 aaPredicted RBP12.64□□□□□ -0.39
VAPA-201ENST00000340541 CHCHD3Q9NX63 227 aaKnown RBP12.64□□□□□ -0.39
VAPA-201ENST00000340541 ONECUT1Q9UBC0 465 aa12.64□□□□□ -0.39
VAPA-201ENST00000340541 ZNF281Q9Y2X9 895 aa12.64□□□□□ -0.39
VAPA-201ENST00000340541 DSCAML1Q8TD84 2053 aa12.64□□□□□ -0.39
VAPA-201ENST00000340541 MGAM2Q2M2H8 2515 aa12.64□□□□□ -0.39
VAPA-201ENST00000340541 TRBV5-5A0A0J9YX44 114 aa12.63□□□□□ -0.39
VAPA-201ENST00000340541 MDFIC2A0A1B0GVS7 189 aa12.63□□□□□ -0.39
VAPA-201ENST00000340541 CLDN34H7C241 214 aa12.63□□□□□ -0.39
VAPA-201ENST00000340541 K7N7A8 449 aa12.63□□□□□ -0.39
VAPA-201ENST00000340541 KDM4BO94953 1096 aa12.63□□□□□ -0.39
VAPA-201ENST00000340541 TK1P04183 234 aa12.63□□□□□ -0.39
VAPA-201ENST00000340541 CDK1P06493 297 aa12.63□□□□□ -0.39
VAPA-201ENST00000340541 MYF6P23409 242 aa12.63□□□□□ -0.39
VAPA-201ENST00000340541 DLX1P56177 255 aa12.63□□□□□ -0.39
VAPA-201ENST00000340541 BPIFB3P59826 476 aa12.63□□□□□ -0.39
VAPA-201ENST00000340541 COL10A1Q03692 680 aa12.63□□□□□ -0.39
VAPA-201ENST00000340541 RIPK1Q13546 671 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms