RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 VCX3AQ9NNX9 186 aa13.93□□□□□ -0.18
SFN-201ENST00000339276 IL36RNQ9UBH0 155 aa13.93□□□□□ -0.18
SFN-201ENST00000339276 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.93□□□□□ -0.18
SFN-201ENST00000339276 RFPL4AA6NLU0 287 aa13.92□□□□□ -0.18
SFN-201ENST00000339276 KIAA1324LA8MWY0 1029 aaPredicted RBP13.92□□□□□ -0.18
SFN-201ENST00000339276 RFPL4AL1F8VTS6 287 aa13.92□□□□□ -0.18
SFN-201ENST00000339276 PHF1O43189 567 aaPredicted RBP13.92□□□□□ -0.18
SFN-201ENST00000339276 FCN3O75636 299 aa13.92□□□□□ -0.18
SFN-201ENST00000339276 TGFAP01135 160 aa13.92□□□□□ -0.18
SFN-201ENST00000339276 SFTPBP07988 381 aa13.92□□□□□ -0.18
SFN-201ENST00000339276 SELLP14151 372 aa13.92□□□□□ -0.18
SFN-201ENST00000339276 CALRP27797 417 aaKnown RBP13.92□□□□□ -0.18
SFN-201ENST00000339276 CEBPDP49716 269 aaPredicted RBP13.92□□□□□ -0.18
SFN-201ENST00000339276 ZNF788Q6ZQV5 615 aa13.92□□□□□ -0.18
SFN-201ENST00000339276 Q8IYB0 196 aa13.92□□□□□ -0.18
SFN-201ENST00000339276 FGFRL1Q8N441 504 aa13.92□□□□□ -0.18
SFN-201ENST00000339276 JAGN1Q8N5M9 183 aa13.92□□□□□ -0.18
SFN-201ENST00000339276 NKAIN3Q8N8D7 197 aa13.92□□□□□ -0.18
SFN-201ENST00000339276 ZSCAN4Q8NAM6 433 aaPredicted RBP13.92□□□□□ -0.18
SFN-201ENST00000339276 GAFA1Q96PS6 74 aa13.92□□□□□ -0.18
SFN-201ENST00000339276 SSBP3Q9BWW4 388 aaPredicted RBP13.92□□□□□ -0.18
SFN-201ENST00000339276 KAAG1Q9UBP8 84 aa13.92□□□□□ -0.18
SFN-201ENST00000339276 OR14J1Q9UGF5 321 aa13.92□□□□□ -0.18
SFN-201ENST00000339276 MALRD1Q5VYJ5 2156 aa13.92□□□□□ -0.18
SFN-201ENST00000339276 TLN2Q9Y4G6 2542 aa13.92□□□□□ -0.18
SFN-201ENST00000339276 TRDV1A0A1B0GX56 115 aa13.91□□□□□ -0.18
SFN-201ENST00000339276 NKX6-3A6NJ46 265 aa13.91□□□□□ -0.18
SFN-201ENST00000339276 A8MXK9 166 aa13.91□□□□□ -0.18
SFN-201ENST00000339276 ARL6IP5O75915 188 aa13.91□□□□□ -0.18
SFN-201ENST00000339276 KNG1P01042 644 aa13.91□□□□□ -0.18
SFN-201ENST00000339276 PRKACAP17612 351 aa13.91□□□□□ -0.18
SFN-201ENST00000339276 PTGFRP43088 359 aa13.91□□□□□ -0.18
SFN-201ENST00000339276 GABRA2P47869 451 aa13.91□□□□□ -0.18
SFN-201ENST00000339276 SNU13P55769 128 aaKnown RBP13.91□□□□□ -0.18
SFN-201ENST00000339276 GNB2P62879 340 aa13.91□□□□□ -0.18
SFN-201ENST00000339276 ATPAF1Q5TC12 328 aaPredicted RBP13.91□□□□□ -0.18
SFN-201ENST00000339276 WDR25Q64LD2 544 aaPredicted RBP13.91□□□□□ -0.18
SFN-201ENST00000339276 SLC36A1Q7Z2H8 476 aa13.91□□□□□ -0.18
SFN-201ENST00000339276 LYPD6Q86Y78 171 aa13.91□□□□□ -0.18
SFN-201ENST00000339276 FAM58AQ8N1B3 248 aa13.91□□□□□ -0.18
SFN-201ENST00000339276 CD177Q8N6Q3 437 aa13.91□□□□□ -0.18
SFN-201ENST00000339276 PNLDC1Q8NA58 520 aaKnown RBP13.91□□□□□ -0.18
SFN-201ENST00000339276 PXT1Q8NFP0 134 aa13.91□□□□□ -0.18
SFN-201ENST00000339276 OR10K1Q8NGX5 313 aa13.91□□□□□ -0.18
SFN-201ENST00000339276 DNTTIP1Q9H147 329 aa13.91□□□□□ -0.18
SFN-201ENST00000339276 CNTD2Q9H8S5 307 aa13.91□□□□□ -0.18
SFN-201ENST00000339276 YAE1D1Q9NRH1 226 aa13.91□□□□□ -0.18
SFN-201ENST00000339276 CLN8Q9UBY8 286 aa13.91□□□□□ -0.18
SFN-201ENST00000339276 STUB1Q9UNE7 303 aa13.91□□□□□ -0.18
SFN-201ENST00000339276 ARHGAP32A7KAX9 2087 aa13.91□□□□□ -0.18
SFN-201ENST00000339276 DVL1O14640 695 aa13.9□□□□□ -0.18
SFN-201ENST00000339276 FOXH1O75593 365 aa13.9□□□□□ -0.18
SFN-201ENST00000339276 CDRT1O95170 752 aa13.9□□□□□ -0.18
SFN-201ENST00000339276 CD36P16671 472 aa13.9□□□□□ -0.18
SFN-201ENST00000339276 JUNBP17275 347 aaPredicted RBP13.9□□□□□ -0.18
SFN-201ENST00000339276 CPT2P23786 658 aa13.9□□□□□ -0.18
SFN-201ENST00000339276 IKZF1Q13422 519 aa13.9□□□□□ -0.18
SFN-201ENST00000339276 DGUOKQ16854 277 aa13.9□□□□□ -0.18
SFN-201ENST00000339276 C22orf42Q6IC83 251 aa13.9□□□□□ -0.18
SFN-201ENST00000339276 FAM166AQ6J272 317 aa13.9□□□□□ -0.18
SFN-201ENST00000339276 ASCL4Q6XD76 172 aa13.9□□□□□ -0.18
SFN-201ENST00000339276 GFI1Q99684 422 aa13.9□□□□□ -0.18
SFN-201ENST00000339276 TEP1Q99973 2627 aaKnown RBP13.9□□□□□ -0.18
SFN-201ENST00000339276 SLITRK2Q9H156 845 aa13.9□□□□□ -0.18
SFN-201ENST00000339276 OR51E2Q9H255 320 aa13.9□□□□□ -0.18
SFN-201ENST00000339276 ELL3Q9HB65 397 aaPredicted RBP13.9□□□□□ -0.18
SFN-201ENST00000339276 HMG20AQ9NP66 347 aa13.9□□□□□ -0.18
SFN-201ENST00000339276 EXOSC4Q9NPD3 245 aaKnown RBP13.9□□□□□ -0.18
SFN-201ENST00000339276 HIF1ANQ9NWT6 349 aa13.9□□□□□ -0.18
SFN-201ENST00000339276 METRNQ9UJH8 293 aa13.9□□□□□ -0.18
SFN-201ENST00000339276 MAB21L2Q9Y586 359 aa13.9□□□□□ -0.18
SFN-201ENST00000339276 SHISA3A0PJX4 238 aa13.9□□□□□ -0.19
SFN-201ENST00000339276 MEGF11A6BM72 1044 aa13.9□□□□□ -0.19
SFN-201ENST00000339276 SIGLEC5O15389 551 aa13.9□□□□□ -0.19
SFN-201ENST00000339276 GALP22466 123 aa13.9□□□□□ -0.19
SFN-201ENST00000339276 GADD45AP24522 165 aa13.9□□□□□ -0.19
SFN-201ENST00000339276 DUSP1P28562 367 aa13.9□□□□□ -0.19
SFN-201ENST00000339276 PRDX2P32119 198 aa13.9□□□□□ -0.19
SFN-201ENST00000339276 DVL1P1P54792 670 aaPredicted RBP13.9□□□□□ -0.19
SFN-201ENST00000339276 IL13RA1P78552 427 aa13.9□□□□□ -0.19
SFN-201ENST00000339276 GLCCI1Q86VQ1 547 aa13.9□□□□□ -0.19
SFN-201ENST00000339276 CDH26Q8IXH8 852 aa13.9□□□□□ -0.19
SFN-201ENST00000339276 ZNRF1Q8ND25 227 aa13.9□□□□□ -0.19
SFN-201ENST00000339276 OR4D6Q8NGJ1 314 aa13.9□□□□□ -0.19
SFN-201ENST00000339276 TMEM186Q96B77 213 aa13.9□□□□□ -0.19
SFN-201ENST00000339276 SDSLQ96GA7 329 aa13.9□□□□□ -0.19
SFN-201ENST00000339276 ING4Q9UNL4 249 aa13.9□□□□□ -0.19
SFN-201ENST00000339276 MRPS28Q9Y2Q9 187 aaKnown RBP13.9□□□□□ -0.19
SFN-201ENST00000339276 TRAV20A0A0B4J274 112 aa13.89□□□□□ -0.19
SFN-201ENST00000339276 NPY4RP50391 375 aa13.89□□□□□ -0.19
SFN-201ENST00000339276 RSU1Q15404 277 aa13.89□□□□□ -0.19
SFN-201ENST00000339276 GLT8D1Q68CQ7 371 aa13.89□□□□□ -0.19
SFN-201ENST00000339276 AWAT2Q6E213 333 aa13.89□□□□□ -0.19
SFN-201ENST00000339276 FIP1L1Q6UN15 594 aaKnown RBP13.89□□□□□ -0.19
SFN-201ENST00000339276 LURAP1LQ8IV03 231 aa13.89□□□□□ -0.19
SFN-201ENST00000339276 ST8SIA4Q92187 359 aa13.89□□□□□ -0.19
SFN-201ENST00000339276 MED30Q96HR3 178 aa13.89□□□□□ -0.19
SFN-201ENST00000339276 METTL9Q9H1A3 318 aa13.89□□□□□ -0.19
SFN-201ENST00000339276 RHOFQ9HBH0 211 aa13.89□□□□□ -0.19
SFN-201ENST00000339276 MMP26Q9NRE1 261 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms