RNA–Protein interactions for RNA: ENST00000338585.6

MCF2-201, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,826 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-201ENST00000338585 ST3GAL6Q9Y274 331 aa3.52□□□□□ -1.85
MCF2-201ENST00000338585 KALRNO60229 2985 aa3.52□□□□□ -1.85
MCF2-201ENST00000338585 FAM221AA4D161 298 aa3.52□□□□□ -1.85
MCF2-201ENST00000338585 LRP5LA4QPB2 252 aa3.52□□□□□ -1.85
MCF2-201ENST00000338585 ZSCAN5BA6NJL1 495 aa3.52□□□□□ -1.85
MCF2-201ENST00000338585 CENPXA8MT69 81 aa3.52□□□□□ -1.85
MCF2-201ENST00000338585 TRAPPC2LH3BP13 241 aa3.52□□□□□ -1.85
MCF2-201ENST00000338585 J3QT63 122 aa3.52□□□□□ -1.85
MCF2-201ENST00000338585 SULT1C2O00338 296 aa3.52□□□□□ -1.85
MCF2-201ENST00000338585 CDIPTO14735 213 aa3.52□□□□□ -1.85
MCF2-201ENST00000338585 ZNF780AO75290 641 aaPredicted RBP3.52□□□□□ -1.85
MCF2-201ENST00000338585 SCGNO76038 276 aa3.52□□□□□ -1.85
MCF2-201ENST00000338585 ECDO95905 644 aaPredicted RBP3.52□□□□□ -1.85
MCF2-201ENST00000338585 TCRBP04435 133 aa3.52□□□□□ -1.85
MCF2-201ENST00000338585 CSN2P05814 226 aa3.52□□□□□ -1.85
MCF2-201ENST00000338585 GSTP1P09211 210 aaKnown RBP3.52□□□□□ -1.85
MCF2-201ENST00000338585 CSF1P09603 554 aa3.52□□□□□ -1.85
MCF2-201ENST00000338585 GSTT2BP0CG30 244 aa3.52□□□□□ -1.85
MCF2-201ENST00000338585 ZNF250P15622 560 aa3.52□□□□□ -1.85
MCF2-201ENST00000338585 GNLYP22749 145 aa3.52□□□□□ -1.85
MCF2-201ENST00000338585 MPZP25189 248 aa3.52□□□□□ -1.85
MCF2-201ENST00000338585 CHATP28329 748 aa3.52□□□□□ -1.85
MCF2-201ENST00000338585 GNG2P59768 71 aa3.52□□□□□ -1.85
MCF2-201ENST00000338585 AP3S2P59780 193 aa3.52□□□□□ -1.85
MCF2-201ENST00000338585 ACTBP60709 375 aa3.52□□□□□ -1.85
MCF2-201ENST00000338585 ACTG1P63261 375 aa3.52□□□□□ -1.85
MCF2-201ENST00000338585 MAB21L1Q13394 359 aa3.52□□□□□ -1.85
MCF2-201ENST00000338585 ARFRP1Q13795 201 aa3.52□□□□□ -1.85
MCF2-201ENST00000338585 MPPED2Q15777 294 aa3.52□□□□□ -1.85
MCF2-201ENST00000338585 ADAM5Q6NVV9 412 aa3.52□□□□□ -1.85
MCF2-201ENST00000338585 TMEM108Q6UXF1 575 aa3.52□□□□□ -1.85
MCF2-201ENST00000338585 UNQ6126/PRO20091Q6UXV3 157 aa3.52□□□□□ -1.85
MCF2-201ENST00000338585 TMEM200AQ86VY9 491 aa3.52□□□□□ -1.85
MCF2-201ENST00000338585 ZNF573Q86YE8 665 aa3.52□□□□□ -1.85
MCF2-201ENST00000338585 SAXO1Q8IYX7 474 aa3.52□□□□□ -1.85
MCF2-201ENST00000338585 ZSCAN4Q8NAM6 433 aaPredicted RBP3.52□□□□□ -1.85
MCF2-201ENST00000338585 SNAPC3Q92966 411 aa3.52□□□□□ -1.85
MCF2-201ENST00000338585 FBXW5Q969U6 566 aa3.52□□□□□ -1.85
MCF2-201ENST00000338585 CNTNAP3BQ96NU0 1288 aa3.52□□□□□ -1.85
MCF2-201ENST00000338585 SULT4A1Q9BR01 284 aa3.52□□□□□ -1.85
MCF2-201ENST00000338585 MARVELD1Q9BSK0 173 aa3.52□□□□□ -1.85
MCF2-201ENST00000338585 BEX2Q9BXY8 128 aa3.52□□□□□ -1.85
MCF2-201ENST00000338585 CNTNAP3Q9BZ76 1288 aa3.52□□□□□ -1.85
MCF2-201ENST00000338585 MRPL37Q9BZE1 423 aaKnown RBP3.52□□□□□ -1.85
MCF2-201ENST00000338585 DPAGT1Q9H3H5 408 aa3.52□□□□□ -1.85
MCF2-201ENST00000338585 BEX1Q9HBH7 125 aa3.52□□□□□ -1.85
MCF2-201ENST00000338585 MOV10Q9HCE1 1003 aaKnown RBP3.52□□□□□ -1.85
MCF2-201ENST00000338585 UFSP2Q9NUQ7 469 aa3.52□□□□□ -1.85
MCF2-201ENST00000338585 PLEKHJ1Q9NW61 149 aa3.52□□□□□ -1.85
MCF2-201ENST00000338585 NKIRAS2Q9NYR9 191 aa3.52□□□□□ -1.85
MCF2-201ENST00000338585 IGKV1D-8A0A087WSZ0 117 aa3.51□□□□□ -1.85
MCF2-201ENST00000338585 UBE2QL1A1L167 161 aa3.51□□□□□ -1.85
MCF2-201ENST00000338585 ZNF736B4DX44 427 aaPredicted RBP3.51□□□□□ -1.85
MCF2-201ENST00000338585 INMT-MINDY4F8WBC2 141 aa3.51□□□□□ -1.85
MCF2-201ENST00000338585 HSPB6O14558 160 aa3.51□□□□□ -1.85
MCF2-201ENST00000338585 AKR7A2O43488 359 aa3.51□□□□□ -1.85
MCF2-201ENST00000338585 OR7C1O76099 320 aaPredicted RBP3.51□□□□□ -1.85
MCF2-201ENST00000338585 TFF1P04155 84 aa3.51□□□□□ -1.85
MCF2-201ENST00000338585 PRKACAP17612 351 aa3.51□□□□□ -1.85
MCF2-201ENST00000338585 TUBG1P23258 451 aa3.51□□□□□ -1.85
MCF2-201ENST00000338585 GLRXP35754 106 aa3.51□□□□□ -1.85
MCF2-201ENST00000338585 KLF3P57682 345 aaPredicted RBP3.51□□□□□ -1.85
MCF2-201ENST00000338585 TAS2R19P59542 299 aa3.51□□□□□ -1.85
MCF2-201ENST00000338585 FGF12P61328 243 aa3.51□□□□□ -1.85
MCF2-201ENST00000338585 IL24Q13007 206 aa3.51□□□□□ -1.85
MCF2-201ENST00000338585 ST3GAL2Q16842 350 aa3.51□□□□□ -1.85
MCF2-201ENST00000338585 TATDN3Q17R31 274 aa3.51□□□□□ -1.85
MCF2-201ENST00000338585 NKPD1Q17RQ9 610 aa3.51□□□□□ -1.85
MCF2-201ENST00000338585 FAM76BQ5HYJ3 339 aa3.51□□□□□ -1.85
MCF2-201ENST00000338585 ATAD3CQ5T2N8 411 aa3.51□□□□□ -1.85
MCF2-201ENST00000338585 ELP2Q6IA86 826 aa3.51□□□□□ -1.85
MCF2-201ENST00000338585 STEAP1BQ6NZ63 245 aa3.51□□□□□ -1.85
MCF2-201ENST00000338585 SLC22A25Q6T423 547 aa3.51□□□□□ -1.85
MCF2-201ENST00000338585 Q6ZPA2 131 aa3.51□□□□□ -1.85
MCF2-201ENST00000338585 C11orf53Q8IXP5 236 aa3.51□□□□□ -1.85
MCF2-201ENST00000338585 MKXQ8IYA7 352 aa3.51□□□□□ -1.85
MCF2-201ENST00000338585 Q8NFD4 153 aa3.51□□□□□ -1.85
MCF2-201ENST00000338585 OR2Z1Q8NG97 314 aa3.51□□□□□ -1.85
MCF2-201ENST00000338585 OR51S1Q8NGJ8 323 aa3.51□□□□□ -1.85
MCF2-201ENST00000338585 LILRB4Q8NHJ6 448 aa3.51□□□□□ -1.85
MCF2-201ENST00000338585 NEUROG1Q92886 237 aa3.51□□□□□ -1.85
MCF2-201ENST00000338585 EMG1Q92979 244 aaKnown RBP3.51□□□□□ -1.85
MCF2-201ENST00000338585 NEURL2Q9BR09 285 aa3.51□□□□□ -1.85
MCF2-201ENST00000338585 C7orf50Q9BRJ6 194 aaKnown RBP3.51□□□□□ -1.85
MCF2-201ENST00000338585 ST6GALNAC5Q9BVH7 336 aa3.51□□□□□ -1.85
MCF2-201ENST00000338585 OR10A4Q9H209 315 aa3.51□□□□□ -1.85
MCF2-201ENST00000338585 IFT46Q9NQC8 304 aa3.51□□□□□ -1.85
MCF2-201ENST00000338585 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.51□□□□□ -1.85
MCF2-201ENST00000338585 TUBG2Q9NRH3 451 aa3.51□□□□□ -1.85
MCF2-201ENST00000338585 CA10Q9NS85 328 aa3.51□□□□□ -1.85
MCF2-201ENST00000338585 TAS2R8Q9NYW2 309 aa3.51□□□□□ -1.85
MCF2-201ENST00000338585 COQ3Q9NZJ6 369 aa3.51□□□□□ -1.85
MCF2-201ENST00000338585 AK3Q9UIJ7 227 aa3.51□□□□□ -1.85
MCF2-201ENST00000338585 SPEF1Q9Y4P9 236 aa3.51□□□□□ -1.85
MCF2-201ENST00000338585 IGSF10Q6WRI0 2623 aa3.51□□□□□ -1.85
MCF2-201ENST00000338585 ZFYVE26Q68DK2 2539 aa3.51□□□□□ -1.85
MCF2-201ENST00000338585 SMG1Q96Q15 3661 aaKnown RBP3.51□□□□□ -1.85
MCF2-201ENST00000338585 IGLV3-9A0A075B6K5 115 aa3.51□□□□□ -1.85
MCF2-201ENST00000338585 A6NLC8 198 aa3.51□□□□□ -1.85
MCF2-201ENST00000338585 WNT9BO14905 357 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms