RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 MAP1AP78559 2803 aaPredicted RBP12.88□□□□□ -0.35
PRPF3-201ENST00000324862 IGHV3OR15-7A0A075B7D8 119 aa12.87□□□□□ -0.35
PRPF3-201ENST00000324862 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.87□□□□□ -0.35
PRPF3-201ENST00000324862 CYB5AP00167 134 aa12.87□□□□□ -0.35
PRPF3-201ENST00000324862 UBBP0CG47 229 aa12.87□□□□□ -0.35
PRPF3-201ENST00000324862 GTF2F2P13984 249 aa12.87□□□□□ -0.35
PRPF3-201ENST00000324862 ERVK11-1P61568 191 aa12.87□□□□□ -0.35
PRPF3-201ENST00000324862 SIGIRRQ6IA17 410 aa12.87□□□□□ -0.35
PRPF3-201ENST00000324862 CCL17Q92583 94 aa12.87□□□□□ -0.35
PRPF3-201ENST00000324862 EMG1Q92979 244 aaKnown RBP12.87□□□□□ -0.35
PRPF3-201ENST00000324862 Q96M66 194 aa12.87□□□□□ -0.35
PRPF3-201ENST00000324862 MRI1Q9BV20 369 aa12.87□□□□□ -0.35
PRPF3-201ENST00000324862 PPP1R3CQ9UQK1 317 aa12.87□□□□□ -0.35
PRPF3-201ENST00000324862 FCER2P06734 321 aa12.87□□□□□ -0.35
PRPF3-201ENST00000324862 ADH4P08319 380 aa12.87□□□□□ -0.35
PRPF3-201ENST00000324862 TNFSF4P23510 183 aa12.87□□□□□ -0.35
PRPF3-201ENST00000324862 TMEM50BP56557 158 aa12.87□□□□□ -0.35
PRPF3-201ENST00000324862 KRTAP10-9P60411 292 aa12.87□□□□□ -0.35
PRPF3-201ENST00000324862 TLE4Q04727 773 aa12.87□□□□□ -0.35
PRPF3-201ENST00000324862 SCN1BQ07699 218 aa12.87□□□□□ -0.35
PRPF3-201ENST00000324862 DYNC1I2Q13409 638 aaKnown RBP12.87□□□□□ -0.35
PRPF3-201ENST00000324862 PLAC9Q5JTB6 97 aa12.87□□□□□ -0.35
PRPF3-201ENST00000324862 SPANXN2Q5MJ10 180 aa12.87□□□□□ -0.35
PRPF3-201ENST00000324862 DTX2Q86UW9 622 aa12.87□□□□□ -0.35
PRPF3-201ENST00000324862 S100A16Q96FQ6 103 aaKnown RBP12.87□□□□□ -0.35
PRPF3-201ENST00000324862 SDHCQ99643 169 aaPredicted RBP12.87□□□□□ -0.35
PRPF3-201ENST00000324862 FAIMQ9NVQ4 179 aa12.87□□□□□ -0.35
PRPF3-201ENST00000324862 GHRLQ9UBU3 117 aa12.87□□□□□ -0.35
PRPF3-201ENST00000324862 SVEP1Q4LDE5 3571 aa12.86□□□□□ -0.35
PRPF3-201ENST00000324862 TRAV18A0A075B6X5 111 aa12.86□□□□□ -0.35
PRPF3-201ENST00000324862 HSPB6O14558 160 aa12.86□□□□□ -0.35
PRPF3-201ENST00000324862 NXPH2O95156 264 aa12.86□□□□□ -0.35
PRPF3-201ENST00000324862 HLA-DQB1P01920 261 aa12.86□□□□□ -0.35
PRPF3-201ENST00000324862 GATA4P43694 442 aa12.86□□□□□ -0.35
PRPF3-201ENST00000324862 SCAND1P57086 179 aa12.86□□□□□ -0.35
PRPF3-201ENST00000324862 TMEM69Q5SWH9 247 aa12.86□□□□□ -0.35
PRPF3-201ENST00000324862 OR2W3Q7Z3T1 314 aa12.86□□□□□ -0.35
PRPF3-201ENST00000324862 FAM58AQ8N1B3 248 aa12.86□□□□□ -0.35
PRPF3-201ENST00000324862 IL36GQ9NZH8 169 aa12.86□□□□□ -0.35
PRPF3-201ENST00000324862 FBLN5Q9UBX5 448 aa12.86□□□□□ -0.35
PRPF3-201ENST00000324862 POLDIP2Q9Y2S7 368 aa12.86□□□□□ -0.35
PRPF3-201ENST00000324862 CLDN25C9JDP6 229 aa12.86□□□□□ -0.35
PRPF3-201ENST00000324862 CD55P08174 381 aa12.86□□□□□ -0.35
PRPF3-201ENST00000324862 GNB3P16520 340 aa12.86□□□□□ -0.35
PRPF3-201ENST00000324862 RAB6AP20340 208 aa12.86□□□□□ -0.35
PRPF3-201ENST00000324862 GLRA1P23415 457 aa12.86□□□□□ -0.35
PRPF3-201ENST00000324862 COL8A2P25067 703 aa12.86□□□□□ -0.35
PRPF3-201ENST00000324862 PITPNBP48739 271 aa12.86□□□□□ -0.35
PRPF3-201ENST00000324862 PTH2RP49190 550 aa12.86□□□□□ -0.35
PRPF3-201ENST00000324862 FGF12P61328 243 aa12.86□□□□□ -0.35
PRPF3-201ENST00000324862 FAM209AQ5JX71 171 aa12.86□□□□□ -0.35
PRPF3-201ENST00000324862 NKAPLQ5M9Q1 402 aa12.86□□□□□ -0.35
PRPF3-201ENST00000324862 SAXO1Q8IYX7 474 aa12.86□□□□□ -0.35
PRPF3-201ENST00000324862 CHST4Q8NCG5 386 aa12.86□□□□□ -0.35
PRPF3-201ENST00000324862 DYRK2Q92630 601 aa12.86□□□□□ -0.35
PRPF3-201ENST00000324862 SOSTQ9BQB4 213 aa12.86□□□□□ -0.35
PRPF3-201ENST00000324862 FN3KRPQ9HA64 309 aa12.86□□□□□ -0.35
PRPF3-201ENST00000324862 HMG20AQ9NP66 347 aa12.86□□□□□ -0.35
PRPF3-201ENST00000324862 KCNK7Q9Y2U2 307 aa12.86□□□□□ -0.35
PRPF3-201ENST00000324862 MEIOCA2RUB1 952 aa12.85□□□□□ -0.35
PRPF3-201ENST00000324862 TMEM127O75204 238 aa12.85□□□□□ -0.35
PRPF3-201ENST00000324862 ZNF780AO75290 641 aaPredicted RBP12.85□□□□□ -0.35
PRPF3-201ENST00000324862 CD80P33681 288 aa12.85□□□□□ -0.35
PRPF3-201ENST00000324862 ETV6P41212 452 aa12.85□□□□□ -0.35
PRPF3-201ENST00000324862 RBM11P57052 281 aaKnown RBP12.85□□□□□ -0.35
PRPF3-201ENST00000324862 TAS2R20P59543 309 aa12.85□□□□□ -0.35
PRPF3-201ENST00000324862 DCDC5Q6ZRR9 648 aa12.85□□□□□ -0.35
PRPF3-201ENST00000324862 C6orf201Q7Z4U5 140 aa12.85□□□□□ -0.35
PRPF3-201ENST00000324862 CELF2-AS1Q8N7Q2 184 aa12.85□□□□□ -0.35
PRPF3-201ENST00000324862 POC1AQ8NBT0 407 aa12.85□□□□□ -0.35
PRPF3-201ENST00000324862 DEFB108BQ8NET1 73 aa12.85□□□□□ -0.35
PRPF3-201ENST00000324862 ARHGAP5-AS1Q96IT6 56 aa12.85□□□□□ -0.35
PRPF3-201ENST00000324862 OR14J1Q9UGF5 321 aa12.85□□□□□ -0.35
PRPF3-201ENST00000324862 HECTD1Q9ULT8 2610 aa12.85□□□□□ -0.35
PRPF3-201ENST00000324862 MEIS3P1A6NDR6 274 aa12.84□□□□□ -0.35
PRPF3-201ENST00000324862 OR7C1O76099 320 aaPredicted RBP12.84□□□□□ -0.35
PRPF3-201ENST00000324862 BLVRBP30043 206 aaPredicted RBP12.84□□□□□ -0.35
PRPF3-201ENST00000324862 TALDO1P37837 337 aa12.84□□□□□ -0.35
PRPF3-201ENST00000324862 GUCA2AQ02747 115 aa12.84□□□□□ -0.35
PRPF3-201ENST00000324862 ZNF787Q6DD87 383 aa12.84□□□□□ -0.35
PRPF3-201ENST00000324862 Q8NFD4 153 aa12.84□□□□□ -0.35
PRPF3-201ENST00000324862 RAB40AQ8WXH6 277 aa12.84□□□□□ -0.35
PRPF3-201ENST00000324862 PTX4Q96A99 478 aa12.84□□□□□ -0.35
PRPF3-201ENST00000324862 AUNIPQ9H7T9 357 aa12.84□□□□□ -0.35
PRPF3-201ENST00000324862 ADAM30Q9UKF2 790 aa12.84□□□□□ -0.35
PRPF3-201ENST00000324862 RAI1Q7Z5J4 1906 aaPredicted RBP12.84□□□□□ -0.35
PRPF3-201ENST00000324862 TMEM235A6NFC5 223 aa12.84□□□□□ -0.35
PRPF3-201ENST00000324862 XRCC3O43542 346 aa12.84□□□□□ -0.35
PRPF3-201ENST00000324862 TNFRSF1AP19438 455 aa12.84□□□□□ -0.35
PRPF3-201ENST00000324862 PPOXP50336 477 aa12.84□□□□□ -0.35
PRPF3-201ENST00000324862 MZT1Q08AG7 82 aa12.84□□□□□ -0.35
PRPF3-201ENST00000324862 TESK1Q15569 626 aa12.84□□□□□ -0.35
PRPF3-201ENST00000324862 BAK1Q16611 211 aa12.84□□□□□ -0.35
PRPF3-201ENST00000324862 ELP2Q6IA86 826 aa12.84□□□□□ -0.35
PRPF3-201ENST00000324862 FAM89BQ8N5H3 189 aa12.84□□□□□ -0.35
PRPF3-201ENST00000324862 OR10R2Q8NGX6 335 aa12.84□□□□□ -0.35
PRPF3-201ENST00000324862 YIPF5Q969M3 257 aa12.84□□□□□ -0.35
PRPF3-201ENST00000324862 DIRC2Q96SL1 478 aa12.84□□□□□ -0.35
PRPF3-201ENST00000324862 TM2D1Q9BX74 207 aa12.84□□□□□ -0.35
PRPF3-201ENST00000324862 METRNQ9UJH8 293 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms