RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 CPT1CQ8TCG5 803 aa13.49□□□□□ -0.25
VARS2-201ENST00000321897 RTN4IP1Q8WWV3 396 aaPredicted RBP13.49□□□□□ -0.25
VARS2-201ENST00000321897 RASL10BQ96S79 203 aa13.49□□□□□ -0.25
VARS2-201ENST00000321897 SOX7Q9BT81 388 aa13.49□□□□□ -0.25
VARS2-201ENST00000321897 FAAP24Q9BTP7 215 aa13.49□□□□□ -0.25
VARS2-201ENST00000321897 GPR61Q9BZJ8 451 aa13.49□□□□□ -0.25
VARS2-201ENST00000321897 MSGN1A6NI15 193 aa13.48□□□□□ -0.25
VARS2-201ENST00000321897 HOXC4P09017 264 aaPredicted RBP13.48□□□□□ -0.25
VARS2-201ENST00000321897 OR5H8P0DN80 308 aa13.48□□□□□ -0.25
VARS2-201ENST00000321897 DMWDQ09019 674 aa13.48□□□□□ -0.25
VARS2-201ENST00000321897 SLC35B3Q9H1N7 401 aa13.48□□□□□ -0.25
VARS2-201ENST00000321897 PPP5D1E7EU14 171 aa13.48□□□□□ -0.25
VARS2-201ENST00000321897 HSD17B6O14756 317 aa13.48□□□□□ -0.25
VARS2-201ENST00000321897 GPR137BO60478 399 aa13.48□□□□□ -0.25
VARS2-201ENST00000321897 UPK3AO75631 287 aa13.48□□□□□ -0.25
VARS2-201ENST00000321897 GALNSP34059 522 aa13.48□□□□□ -0.25
VARS2-201ENST00000321897 NKX2-1P43699 371 aaPredicted RBP13.48□□□□□ -0.25
VARS2-201ENST00000321897 CLDN15P56746 228 aa13.48□□□□□ -0.25
VARS2-201ENST00000321897 RPS16P62249 146 aaKnown RBP13.48□□□□□ -0.25
VARS2-201ENST00000321897 MKXQ8IYA7 352 aa13.48□□□□□ -0.25
VARS2-201ENST00000321897 HIST1H2BAQ96A08 127 aa13.48□□□□□ -0.25
VARS2-201ENST00000321897 PRDM6Q9NQX0 595 aa13.48□□□□□ -0.25
VARS2-201ENST00000321897 WSB1Q9Y6I7 421 aa13.48□□□□□ -0.25
VARS2-201ENST00000321897 ANAPC1Q9H1A4 1944 aa13.48□□□□□ -0.25
VARS2-201ENST00000321897 FANCMQ8IYD8 2048 aa13.48□□□□□ -0.25
VARS2-201ENST00000321897 ZNF266Q14584 549 aa13.48□□□□□ -0.25
VARS2-201ENST00000321897 KISS1Q15726 138 aa13.48□□□□□ -0.25
VARS2-201ENST00000321897 C3AR1Q16581 482 aa13.48□□□□□ -0.25
VARS2-201ENST00000321897 TMEM268Q5VZI3 342 aa13.48□□□□□ -0.25
VARS2-201ENST00000321897 FBXL14Q8N1E6 418 aa13.48□□□□□ -0.25
VARS2-201ENST00000321897 LRFN5Q96NI6 719 aa13.48□□□□□ -0.25
VARS2-201ENST00000321897 LHX6Q9UPM6 363 aa13.48□□□□□ -0.25
VARS2-201ENST00000321897 LIPGQ9Y5X9 500 aa13.48□□□□□ -0.25
VARS2-201ENST00000321897 C5orf49A4QMS7 147 aa13.47□□□□□ -0.25
VARS2-201ENST00000321897 GJE1A6NN92 205 aa13.47□□□□□ -0.25
VARS2-201ENST00000321897 GRPP07492 148 aa13.47□□□□□ -0.25
VARS2-201ENST00000321897 EIF1P41567 113 aaKnown RBP13.47□□□□□ -0.25
VARS2-201ENST00000321897 THNSL2Q86YJ6 484 aa13.47□□□□□ -0.25
VARS2-201ENST00000321897 HDHD3Q9BSH5 251 aaPredicted RBP13.47□□□□□ -0.25
VARS2-201ENST00000321897 ANKUB1A6NFN9 424 aa13.47□□□□□ -0.25
VARS2-201ENST00000321897 ASAH2BP0C7U1 165 aa13.47□□□□□ -0.25
VARS2-201ENST00000321897 MYO7BQ6PIF6 2116 aa13.47□□□□□ -0.25
VARS2-201ENST00000321897 DOK3Q7L591 496 aa13.47□□□□□ -0.25
VARS2-201ENST00000321897 COMMD1Q8N668 190 aa13.47□□□□□ -0.25
VARS2-201ENST00000321897 OR8B12Q8NGG6 310 aa13.47□□□□□ -0.25
VARS2-201ENST00000321897 NINJ1Q92982 152 aa13.47□□□□□ -0.25
VARS2-201ENST00000321897 ZNF275Q9NSD4 429 aaPredicted RBP13.47□□□□□ -0.25
VARS2-201ENST00000321897 MCTS1Q9ULC4 181 aaKnown RBP13.47□□□□□ -0.25
VARS2-201ENST00000321897 H7BYZ3 331 aa13.47□□□□□ -0.25
VARS2-201ENST00000321897 BGLAPP02818 100 aa13.47□□□□□ -0.25
VARS2-201ENST00000321897 CCL3P10147 92 aa13.47□□□□□ -0.25
VARS2-201ENST00000321897 TMEM41BQ5BJD5 291 aa13.47□□□□□ -0.25
VARS2-201ENST00000321897 SLC38A9Q8NBW4 561 aa13.47□□□□□ -0.25
VARS2-201ENST00000321897 OXGR1Q96P68 337 aa13.47□□□□□ -0.25
VARS2-201ENST00000321897 SLC25A31Q9H0C2 315 aa13.47□□□□□ -0.25
VARS2-201ENST00000321897 HELZP42694 1942 aaKnown RBP13.47□□□□□ -0.25
VARS2-201ENST00000321897 THSD7BQ9C0I4 1608 aa13.47□□□□□ -0.25
VARS2-201ENST00000321897 TRAV14DV4A0A0A6YYC5 116 aa13.46□□□□□ -0.25
VARS2-201ENST00000321897 PDGFBP01127 241 aaPredicted RBP13.46□□□□□ -0.25
VARS2-201ENST00000321897 HNF1AP20823 631 aa13.46□□□□□ -0.25
VARS2-201ENST00000321897 ZNF684Q5T5D7 378 aa13.46□□□□□ -0.25
VARS2-201ENST00000321897 OR8G2PQ6IF36 304 aa13.46□□□□□ -0.25
VARS2-201ENST00000321897 SLC25A42Q86VD7 318 aa13.46□□□□□ -0.25
VARS2-201ENST00000321897 ZDHHC22Q8N966 263 aa13.46□□□□□ -0.25
VARS2-201ENST00000321897 EMG1Q92979 244 aaKnown RBP13.46□□□□□ -0.25
VARS2-201ENST00000321897 MRGPRX4Q96LA9 322 aa13.46□□□□□ -0.25
VARS2-201ENST00000321897 ZNF385AQ96PM9 386 aaKnown RBP13.46□□□□□ -0.25
VARS2-201ENST00000321897 TRAPPC2LH3BP13 241 aa13.46□□□□□ -0.25
VARS2-201ENST00000321897 RAMP1O60894 148 aa13.46□□□□□ -0.25
VARS2-201ENST00000321897 SFT2D2O95562 160 aa13.46□□□□□ -0.25
VARS2-201ENST00000321897 TLE4Q04727 773 aa13.46□□□□□ -0.25
VARS2-201ENST00000321897 CNN3Q15417 329 aaKnown RBP13.46□□□□□ -0.25
VARS2-201ENST00000321897 ZSCAN4Q8NAM6 433 aaPredicted RBP13.46□□□□□ -0.25
VARS2-201ENST00000321897 APCDD1LQ8NCL9 501 aa13.46□□□□□ -0.25
VARS2-201ENST00000321897 NOTCH3Q9UM47 2321 aa13.46□□□□□ -0.25
VARS2-201ENST00000321897 FAM24AA6NFZ4 105 aa13.46□□□□□ -0.26
VARS2-201ENST00000321897 E5RGE8 158 aa13.46□□□□□ -0.26
VARS2-201ENST00000321897 TK1P04183 234 aa13.46□□□□□ -0.26
VARS2-201ENST00000321897 ZNF66Q6ZN08 573 aa13.46□□□□□ -0.26
VARS2-201ENST00000321897 RABEPKQ7Z6M1 372 aa13.46□□□□□ -0.26
VARS2-201ENST00000321897 NOXO1Q8NFA2 376 aa13.46□□□□□ -0.26
VARS2-201ENST00000321897 PSMF1Q92530 271 aa13.46□□□□□ -0.26
VARS2-201ENST00000321897 ST3GAL6Q9Y274 331 aa13.46□□□□□ -0.26
VARS2-201ENST00000321897 NSG2Q9Y328 171 aa13.46□□□□□ -0.26
VARS2-201ENST00000321897 NPTNQ9Y639 398 aa13.46□□□□□ -0.26
VARS2-201ENST00000321897 DOPEY2Q9Y3R5 2298 aa13.46□□□□□ -0.26
VARS2-201ENST00000321897 IGKV1D-43A0A0B4J1Z2 117 aa13.45□□□□□ -0.26
VARS2-201ENST00000321897 ZNF816-ZNF321PA0A0X1KG74 233 aa13.45□□□□□ -0.26
VARS2-201ENST00000321897 CD300LBA8K4G0 201 aa13.45□□□□□ -0.26
VARS2-201ENST00000321897 APLNRP35414 380 aa13.45□□□□□ -0.26
VARS2-201ENST00000321897 SLC36A1Q7Z2H8 476 aa13.45□□□□□ -0.26
VARS2-201ENST00000321897 OR56B2PQ8NGI1 322 aa13.45□□□□□ -0.26
VARS2-201ENST00000321897 OBP2BQ9NPH6 170 aa13.45□□□□□ -0.26
VARS2-201ENST00000321897 SLC39A9Q9NUM3 307 aa13.45□□□□□ -0.26
VARS2-201ENST00000321897 CLN5O75503 358 aa13.45□□□□□ -0.26
VARS2-201ENST00000321897 KLK2P20151 261 aa13.45□□□□□ -0.26
VARS2-201ENST00000321897 BMP5P22003 454 aa13.45□□□□□ -0.26
VARS2-201ENST00000321897 RAB1AP62820 205 aa13.45□□□□□ -0.26
VARS2-201ENST00000321897 MICBQ29980 383 aa13.45□□□□□ -0.26
VARS2-201ENST00000321897 SPINK14Q6IE38 97 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms