RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 TP53RKQ96S44 253 aa8.4□□□□□ -1.07
RPGR-201ENST00000318842 GABRG3Q99928 467 aa8.4□□□□□ -1.07
RPGR-201ENST00000318842 RNF122Q9H9V4 155 aa8.4□□□□□ -1.07
RPGR-201ENST00000318842 AK3Q9UIJ7 227 aa8.4□□□□□ -1.07
RPGR-201ENST00000318842 IGKV1-27A0A075B6S5 117 aa8.39□□□□□ -1.07
RPGR-201ENST00000318842 ZNF726A6NNF4 738 aa8.39□□□□□ -1.07
RPGR-201ENST00000318842 H3BQ15 152 aa8.39□□□□□ -1.07
RPGR-201ENST00000318842 OR2J2O76002 312 aa8.39□□□□□ -1.07
RPGR-201ENST00000318842 EN2P19622 333 aaPredicted RBP8.39□□□□□ -1.07
RPGR-201ENST00000318842 S100PP25815 95 aa8.39□□□□□ -1.07
RPGR-201ENST00000318842 GABREP78334 506 aa8.39□□□□□ -1.07
RPGR-201ENST00000318842 CYCSP99999 105 aaKnown RBP8.39□□□□□ -1.07
RPGR-201ENST00000318842 HLA-BQ31612 363 aa8.39□□□□□ -1.07
RPGR-201ENST00000318842 SOHLH1Q5JUK2 328 aa8.39□□□□□ -1.07
RPGR-201ENST00000318842 SLC22A25Q6T423 547 aa8.39□□□□□ -1.07
RPGR-201ENST00000318842 LHFPL1Q86WI0 220 aa8.39□□□□□ -1.07
RPGR-201ENST00000318842 KCNG3Q8TAE7 436 aa8.39□□□□□ -1.07
RPGR-201ENST00000318842 RTN4IP1Q8WWV3 396 aaPredicted RBP8.39□□□□□ -1.07
RPGR-201ENST00000318842 RBM24Q9BX46 236 aaKnown RBP8.39□□□□□ -1.07
RPGR-201ENST00000318842 DNAJB11Q9UBS4 358 aa8.39□□□□□ -1.07
RPGR-201ENST00000318842 HDGFL3Q9Y3E1 203 aa8.39□□□□□ -1.07
RPGR-201ENST00000318842 NKX2-6A6NCS4 301 aa8.39□□□□□ -1.07
RPGR-201ENST00000318842 RAP1AP62834 184 aa8.39□□□□□ -1.07
RPGR-201ENST00000318842 HOXA4Q00056 320 aaPredicted RBP8.39□□□□□ -1.07
RPGR-201ENST00000318842 PNLIPRP3Q17RR3 467 aa8.39□□□□□ -1.07
RPGR-201ENST00000318842 SUMF2Q8NBJ7 301 aa8.39□□□□□ -1.07
RPGR-201ENST00000318842 OR5T1Q8NG75 326 aa8.39□□□□□ -1.07
RPGR-201ENST00000318842 ZNF385AQ96PM9 386 aaKnown RBP8.39□□□□□ -1.07
RPGR-201ENST00000318842 TMEM106CQ9BVX2 250 aa8.39□□□□□ -1.07
RPGR-201ENST00000318842 AURKAIP1Q9NWT8 199 aaPredicted RBP8.39□□□□□ -1.07
RPGR-201ENST00000318842 COPS7AQ9UBW8 275 aa8.39□□□□□ -1.07
RPGR-201ENST00000318842 ADAMTS9Q9P2N4 1935 aa8.39□□□□□ -1.07
RPGR-201ENST00000318842 IGSF23A1L1A6 192 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 ZNF724A8MTY0 619 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 TERTO14746 1132 aaKnown RBP8.38□□□□□ -1.07
RPGR-201ENST00000318842 PRF1P14222 555 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 TUBG1P23258 451 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 CSNK1EP49674 416 aaKnown RBP8.38□□□□□ -1.07
RPGR-201ENST00000318842 TAS2R31P59538 309 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 RAB2AP61019 212 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 SLC35A1P78382 337 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 KHDC3LQ587J8 217 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 SLC23A3Q6PIS1 610 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 FBXW12Q6X9E4 464 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 TMPRSS7Q7RTY8 843 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 SGPP2Q8IWX5 399 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 SKA3Q8IX90 412 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 ARRDC1Q8N5I2 433 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 HPSE2Q8WWQ2 592 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 TCTN2Q96GX1 697 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 VSIRQ9H7M9 311 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 PARP11Q9NR21 331 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 METTL1Q9UBP6 276 aaKnown RBP8.38□□□□□ -1.07
RPGR-201ENST00000318842 STARD10Q9Y365 291 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 DOCK10Q96BY6 2186 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 KIR2DS5A0A0G2JLQ3 304 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 A0A0G2JNG1 304 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 KIR2DS3K7RE56 304 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 SCAF4O95104 1147 aaKnown RBP8.38□□□□□ -1.07
RPGR-201ENST00000318842 TMEM50AO95807 157 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 CD63P08962 238 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 CCL2P13500 99 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 CFPP27918 469 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 APLNRP35414 380 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 HTR5AP47898 357 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 CASP6P55212 293 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 RND3P61587 244 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 RNF4P78317 190 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 DLK1P80370 383 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 ZNF154Q13106 437 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 KIR2DS5Q14953 304 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 ABCA11PQ4W5N1 156 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 SPIN3Q5JUX0 258 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 PEG10Q86TG7 708 aaKnown RBP8.38□□□□□ -1.07
RPGR-201ENST00000318842 SLC35G3Q8N808 338 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 DTWD2Q8NBA8 298 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 OR2G3Q8NGZ4 309 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 TCTEX1D2Q8WW35 142 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 C14orf144Q96I85 54 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 PNRC2Q9NPJ4 139 aaKnown RBP8.38□□□□□ -1.07
RPGR-201ENST00000318842 GLRX2Q9NS18 164 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 KPTNQ9Y664 436 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 TRBV11-1A0A0K0K1C0 115 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 A0A1B0GUS0 222 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 LIPT2A6NK58 231 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 ZFP92A6NM28 416 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 HIST1H2BKO60814 126 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 MT-ATP6P00846 226 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 HIST1H2BJP06899 126 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 HEXBP07686 556 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 FBLP22087 321 aaKnown RBP8.38□□□□□ -1.07
RPGR-201ENST00000318842 HIST1H2BOP23527 126 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 HIST1H2BBP33778 126 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 MTCP1P56278 107 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 HIST1H2BDP58876 126 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 HIST1H2BCP62807 126 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 DEFA6Q01524 100 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 TOMM20Q15388 145 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 RSU1Q15404 277 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 HIST2H2BEQ16778 126 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms