RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 STMND1H3BQB6 276 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 HSD17B6O14756 317 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 FAM90A15PP0C7V4 464 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 FAM90A13PP0C7W8 464 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 FAM90A14PP0C7W9 464 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 FAM90A24PP0C7X0 464 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 RD3LP0DJH9 198 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 BCKDHBP21953 392 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 CD200P41217 278 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 OR3A4PP47883 348 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 ID4P47928 161 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 ARL4DP49703 201 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 IDH3GP51553 393 aaPredicted RBP4.19□□□□□ -1.74
PTPN13-201ENST00000316707 LCN2P80188 198 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 TMEM211Q6ICI0 200 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 SPSB3Q6PJ21 355 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 BTNL3Q6UXE8 466 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 CYP2G1PQ6ZSU1 146 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 CYB561D1Q8N8Q1 229 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 FRZBQ92765 325 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 Q96M66 194 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 RBM14Q96PK6 669 aaKnown RBP4.19□□□□□ -1.74
PTPN13-201ENST00000316707 RAB40CQ96S21 281 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 TMEM222Q9H0R3 208 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 RNF208Q9H0X6 261 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 LRFN1Q9P244 771 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 RCL1Q9Y2P8 373 aaKnown RBP4.19□□□□□ -1.74
PTPN13-201ENST00000316707 LIPGQ9Y5X9 500 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 LRP5LA4QPB2 252 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 OTOL1A6NHN0 477 aaPredicted RBP4.19□□□□□ -1.74
PTPN13-201ENST00000316707 LIPT2A6NK58 231 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 A8MWP6 167 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 MASP2O00187 686 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 FHITP49789 147 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 MPV17LQ2QL34 196 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 TANGO2Q6ICL3 276 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 ZNF695Q8IW36 515 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 OR10AD1Q8NGE0 317 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 BORCS8Q96FH0 119 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 CAPNS2Q96L46 248 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 RIMS4Q9H426 269 aaPredicted RBP4.19□□□□□ -1.74
PTPN13-201ENST00000316707 SOHLH2Q9NX45 425 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 CACNA1CQ13936 2221 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 NUMA1Q14980 2115 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 LOC102725191A0A1B0GVB3 256 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 CDC14CA4D256 554 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 SOX15O60248 233 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 BTF3P20290 206 aaKnown RBP4.19□□□□□ -1.74
PTPN13-201ENST00000316707 CLRN1P58418 232 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 RANP62826 216 aaKnown RBP4.19□□□□□ -1.74
PTPN13-201ENST00000316707 ID3Q02535 119 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 MFAP5Q13361 173 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 OR4D5Q8NGN0 318 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 OR10S1Q8NGN2 331 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 MBD3L1Q8WWY6 194 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 SPSB2Q99619 263 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 MRPL37Q9BZE1 423 aaKnown RBP4.19□□□□□ -1.74
PTPN13-201ENST00000316707 CDH20Q9HBT6 801 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 Q9N2K0 584 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 MED29Q9NX70 200 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 URGCP-MRPS24S4R325 110 aa4.19□□□□□ -1.74
PTPN13-201ENST00000316707 ARID1AO14497 2285 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 MDC1Q14676 2089 aaKnown RBP4.18□□□□□ -1.74
PTPN13-201ENST00000316707 MS4A18H0YCH9 400 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 MPZL1O95297 269 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 FCGR2AP12318 317 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 KIR2DL1P43626 348 aaPredicted RBP4.18□□□□□ -1.74
PTPN13-201ENST00000316707 RAB11AP62491 216 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 RNF4P78317 190 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 MS4A18Q3C1V0 323 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 TMEM196Q5HYL7 178 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 OR8B12Q8NGG6 310 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 SCGB1C1Q8TD33 95 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 LANCL2Q9NS86 450 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 CLEC18AA5D8T8 446 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 PHF1O43189 567 aaPredicted RBP4.18□□□□□ -1.74
PTPN13-201ENST00000316707 LMX1BO60663 402 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 ZNF41P51814 821 aaPredicted RBP4.18□□□□□ -1.74
PTPN13-201ENST00000316707 ZNF121P58317 390 aaPredicted RBP4.18□□□□□ -1.74
PTPN13-201ENST00000316707 ZNF385CQ66K41 422 aaPredicted RBP4.18□□□□□ -1.74
PTPN13-201ENST00000316707 FAM57BQ71RH2 274 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 LYZL2Q7Z4W2 148 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 CLEC18CQ8NCF0 446 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 MSI2Q96DH6 328 aaKnown RBP4.18□□□□□ -1.74
PTPN13-201ENST00000316707 TMEM56Q96MV1 263 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 NEU1Q99519 415 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 ZNF160Q9HCG1 818 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 NAT8Q9UHE5 227 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 TMEM56-RWDD3S4R434 201 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 FAM24AA6NFZ4 105 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 RAMP1O60894 148 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 PIAS2O75928 621 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 CLPSP04118 112 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 SOD3P08294 240 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 FASLGP48023 281 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 CEBPGP53567 150 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 ERVFRD-1P60508 538 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 PRDX4Q13162 271 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 SPNS3Q6ZMD2 512 aa4.18□□□□□ -1.74
PTPN13-201ENST00000316707 ZNF100Q8IYN0 542 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms