RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 ZNF75AQ96N20 296 aa12□□□□□ -0.49
VAMP2-201ENST00000316509 ZNF286AQ9HBT8 521 aa12□□□□□ -0.49
VAMP2-201ENST00000316509 PLSCR2Q9NRY7 297 aa12□□□□□ -0.49
VAMP2-201ENST00000316509 GPR160Q9UJ42 338 aa12□□□□□ -0.49
VAMP2-201ENST00000316509 KNTC1P50748 2209 aa12□□□□□ -0.49
VAMP2-201ENST00000316509 VPS13AQ96RL7 3174 aa11.99□□□□□ -0.49
VAMP2-201ENST00000316509 TM4SF5O14894 197 aa11.99□□□□□ -0.49
VAMP2-201ENST00000316509 GLAP06280 429 aa11.99□□□□□ -0.49
VAMP2-201ENST00000316509 SFTPBP07988 381 aa11.99□□□□□ -0.49
VAMP2-201ENST00000316509 TUBG1P23258 451 aa11.99□□□□□ -0.49
VAMP2-201ENST00000316509 IGFL3Q6UXB1 125 aa11.99□□□□□ -0.49
VAMP2-201ENST00000316509 TFAP2EQ6VUC0 442 aa11.99□□□□□ -0.49
VAMP2-201ENST00000316509 ZNF573Q86YE8 665 aa11.99□□□□□ -0.49
VAMP2-201ENST00000316509 ZADH2Q8N4Q0 377 aa11.99□□□□□ -0.49
VAMP2-201ENST00000316509 C1orf162Q8NEQ5 155 aaPredicted RBP11.99□□□□□ -0.49
VAMP2-201ENST00000316509 SLC30A7Q8NEW0 376 aa11.99□□□□□ -0.49
VAMP2-201ENST00000316509 THAP6Q8TBB0 222 aa11.99□□□□□ -0.49
VAMP2-201ENST00000316509 CASTOR1Q8WTX7 329 aa11.99□□□□□ -0.49
VAMP2-201ENST00000316509 VRK1Q99986 396 aaPredicted RBP11.99□□□□□ -0.49
VAMP2-201ENST00000316509 SULT4A1Q9BR01 284 aa11.99□□□□□ -0.49
VAMP2-201ENST00000316509 ARL6Q9H0F7 186 aa11.99□□□□□ -0.49
VAMP2-201ENST00000316509 TUBG2Q9NRH3 451 aa11.99□□□□□ -0.49
VAMP2-201ENST00000316509 CACNA1HO95180 2353 aa11.99□□□□□ -0.49
VAMP2-201ENST00000316509 POM121CA8CG34 1229 aa11.99□□□□□ -0.49
VAMP2-201ENST00000316509 PLATP00750 562 aa11.99□□□□□ -0.49
VAMP2-201ENST00000316509 UBE2NP61088 152 aaKnown RBP11.99□□□□□ -0.49
VAMP2-201ENST00000316509 HIKESHIQ53FT3 197 aa11.99□□□□□ -0.49
VAMP2-201ENST00000316509 ZNF660Q6AZW8 331 aaPredicted RBP11.99□□□□□ -0.49
VAMP2-201ENST00000316509 CLEC18BQ6UXF7 455 aa11.99□□□□□ -0.49
VAMP2-201ENST00000316509 KCTD9Q7L273 389 aa11.99□□□□□ -0.49
VAMP2-201ENST00000316509 CALHM1Q8IU99 346 aa11.99□□□□□ -0.49
VAMP2-201ENST00000316509 KCNRGQ8N5I3 272 aa11.99□□□□□ -0.49
VAMP2-201ENST00000316509 OR5P3Q8WZ94 311 aa11.99□□□□□ -0.49
VAMP2-201ENST00000316509 GTF3AQ92664 365 aaKnown RBP11.99□□□□□ -0.49
VAMP2-201ENST00000316509 MARVELD3Q96A59 401 aa11.99□□□□□ -0.49
VAMP2-201ENST00000316509 PKIBQ9C010 78 aa11.99□□□□□ -0.49
VAMP2-201ENST00000316509 SPACA1Q9HBV2 294 aa11.99□□□□□ -0.49
VAMP2-201ENST00000316509 TNFSF18Q9UNG2 199 aa11.99□□□□□ -0.49
VAMP2-201ENST00000316509 LHX6Q9UPM6 363 aa11.99□□□□□ -0.49
VAMP2-201ENST00000316509 ZNF732B4DXR9 585 aa11.98□□□□□ -0.49
VAMP2-201ENST00000316509 TRAPPC2LH3BP13 241 aa11.98□□□□□ -0.49
VAMP2-201ENST00000316509 SDCBPO00560 298 aaPredicted RBP11.98□□□□□ -0.49
VAMP2-201ENST00000316509 OR5H8P0DN80 308 aa11.98□□□□□ -0.49
VAMP2-201ENST00000316509 PGAM2P15259 253 aa11.98□□□□□ -0.49
VAMP2-201ENST00000316509 UCP3P55916 312 aa11.98□□□□□ -0.49
VAMP2-201ENST00000316509 GNG3P63215 75 aa11.98□□□□□ -0.49
VAMP2-201ENST00000316509 FBXW12Q6X9E4 464 aa11.98□□□□□ -0.49
VAMP2-201ENST00000316509 Q6ZT83 130 aa11.98□□□□□ -0.49
VAMP2-201ENST00000316509 ACOT7LQ6ZUV0 252 aa11.98□□□□□ -0.49
VAMP2-201ENST00000316509 MDP1Q86V88 176 aa11.98□□□□□ -0.49
VAMP2-201ENST00000316509 SCARB1Q8WTV0 552 aa11.98□□□□□ -0.49
VAMP2-201ENST00000316509 PPP1R1CQ8WVI7 109 aa11.98□□□□□ -0.49
VAMP2-201ENST00000316509 ZNF2Q9BSG1 426 aaPredicted RBP11.98□□□□□ -0.49
VAMP2-201ENST00000316509 RIMS4Q9H426 269 aaPredicted RBP11.98□□□□□ -0.49
VAMP2-201ENST00000316509 C12orf4Q9NQ89 552 aa11.98□□□□□ -0.49
VAMP2-201ENST00000316509 FAM86C1Q9NVL1 165 aa11.98□□□□□ -0.49
VAMP2-201ENST00000316509 AHCTF1Q8WYP5 2266 aa11.98□□□□□ -0.49
VAMP2-201ENST00000316509 MYO15AQ9UKN7 3530 aa11.98□□□□□ -0.49
VAMP2-201ENST00000316509 NGFP01138 241 aa11.98□□□□□ -0.49
VAMP2-201ENST00000316509 CCL2P13500 99 aa11.98□□□□□ -0.49
VAMP2-201ENST00000316509 SELEP16581 610 aa11.98□□□□□ -0.49
VAMP2-201ENST00000316509 WT1P19544 449 aaPredicted RBP11.98□□□□□ -0.49
VAMP2-201ENST00000316509 PSMB6P28072 239 aa11.98□□□□□ -0.49
VAMP2-201ENST00000316509 WNT5AP41221 380 aa11.98□□□□□ -0.49
VAMP2-201ENST00000316509 AP2S1P53680 142 aaPredicted RBP11.98□□□□□ -0.49
VAMP2-201ENST00000316509 DEFB109BQ30KR1 87 aa11.98□□□□□ -0.49
VAMP2-201ENST00000316509 PIGYQ3MUY2 71 aa11.98□□□□□ -0.49
VAMP2-201ENST00000316509 SGPP2Q8IWX5 399 aa11.98□□□□□ -0.49
VAMP2-201ENST00000316509 HPSE2Q8WWQ2 592 aa11.98□□□□□ -0.49
VAMP2-201ENST00000316509 PIK3IP1Q96FE7 263 aa11.98□□□□□ -0.49
VAMP2-201ENST00000316509 TRIB1Q96RU8 372 aa11.98□□□□□ -0.49
VAMP2-201ENST00000316509 MED9Q9NWA0 146 aa11.98□□□□□ -0.49
VAMP2-201ENST00000316509 CSAG2Q9Y5P2 127 aa11.98□□□□□ -0.49
VAMP2-201ENST00000316509 KCNMB2Q9Y691 235 aa11.98□□□□□ -0.49
VAMP2-201ENST00000316509 TRBV6-7A0A0A0MS04 114 aa11.97□□□□□ -0.49
VAMP2-201ENST00000316509 RPS10-NUDT3A0A1W2PQS6 291 aa11.97□□□□□ -0.49
VAMP2-201ENST00000316509 C5orf51A6NDU8 294 aa11.97□□□□□ -0.49
VAMP2-201ENST00000316509 CFDP00746 253 aaPredicted RBP11.97□□□□□ -0.49
VAMP2-201ENST00000316509 CRHP06850 196 aa11.97□□□□□ -0.49
VAMP2-201ENST00000316509 ZNF14P17017 642 aaPredicted RBP11.97□□□□□ -0.49
VAMP2-201ENST00000316509 GLRA1P23415 457 aa11.97□□□□□ -0.49
VAMP2-201ENST00000316509 SERPINF1P36955 418 aa11.97□□□□□ -0.49
VAMP2-201ENST00000316509 HAAOP46952 286 aa11.97□□□□□ -0.49
VAMP2-201ENST00000316509 PRSS12P56730 875 aa11.97□□□□□ -0.49
VAMP2-201ENST00000316509 UBA52P62987 128 aaKnown RBP11.97□□□□□ -0.49
VAMP2-201ENST00000316509 PMP22Q01453 160 aa11.97□□□□□ -0.49
VAMP2-201ENST00000316509 IL24Q13007 206 aa11.97□□□□□ -0.49
VAMP2-201ENST00000316509 UNQ6126/PRO20091Q6UXV3 157 aa11.97□□□□□ -0.49
VAMP2-201ENST00000316509 C1orf123Q9NWV4 160 aa11.97□□□□□ -0.49
VAMP2-201ENST00000316509 RCC2Q9P258 522 aaKnown RBP11.97□□□□□ -0.49
VAMP2-201ENST00000316509 KCNIP3Q9Y2W7 256 aa11.97□□□□□ -0.49
VAMP2-201ENST00000316509 MED13Q9UHV7 2174 aa11.97□□□□□ -0.49
VAMP2-201ENST00000316509 IGKV1D-8A0A087WSZ0 117 aa11.96□□□□□ -0.49
VAMP2-201ENST00000316509 LEUTXA8MZ59 168 aa11.96□□□□□ -0.49
VAMP2-201ENST00000316509 IFNA2P01563 188 aa11.96□□□□□ -0.49
VAMP2-201ENST00000316509 RPS2P15880 293 aaKnown RBP11.96□□□□□ -0.49
VAMP2-201ENST00000316509 IGHV1-2P23083 117 aa11.96□□□□□ -0.49
VAMP2-201ENST00000316509 SUPT4H1P63272 117 aaKnown RBP11.96□□□□□ -0.49
VAMP2-201ENST00000316509 SRSF6Q13247 344 aaKnown RBP11.96□□□□□ -0.49
VAMP2-201ENST00000316509 IL13RA2Q14627 380 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms