RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 MMP9P14780 707 aa9.93□□□□□ -0.82
SCFD1-201ENST00000311943 EPHA1P21709 976 aa9.93□□□□□ -0.82
SCFD1-201ENST00000311943 OR3A4PP47883 348 aa9.93□□□□□ -0.82
SCFD1-201ENST00000311943 ZP1P60852 638 aa9.93□□□□□ -0.82
SCFD1-201ENST00000311943 COL10A1Q03692 680 aa9.93□□□□□ -0.82
SCFD1-201ENST00000311943 IL24Q13007 206 aa9.93□□□□□ -0.82
SCFD1-201ENST00000311943 PDZK1IP1Q13113 114 aa9.93□□□□□ -0.82
SCFD1-201ENST00000311943 KISS1Q15726 138 aa9.93□□□□□ -0.82
SCFD1-201ENST00000311943 SNCBQ16143 134 aa9.93□□□□□ -0.82
SCFD1-201ENST00000311943 METTL11BQ5VVY1 283 aa9.93□□□□□ -0.82
SCFD1-201ENST00000311943 EGFL6Q8IUX8 553 aa9.93□□□□□ -0.82
SCFD1-201ENST00000311943 SERPINA12Q8IW75 414 aa9.93□□□□□ -0.82
SCFD1-201ENST00000311943 CEP19Q96LK0 163 aa9.93□□□□□ -0.82
SCFD1-201ENST00000311943 DCTN5Q9BTE1 182 aa9.93□□□□□ -0.82
SCFD1-201ENST00000311943 ESM1Q9NQ30 184 aa9.93□□□□□ -0.82
SCFD1-201ENST00000311943 SLC25A10Q9UBX3 287 aaPredicted RBP9.93□□□□□ -0.82
SCFD1-201ENST00000311943 ZNF281Q9Y2X9 895 aa9.93□□□□□ -0.82
SCFD1-201ENST00000311943 COL6A5A8TX70 2615 aa9.93□□□□□ -0.82
SCFD1-201ENST00000311943 TMEM82A0PJX8 343 aa9.92□□□□□ -0.82
SCFD1-201ENST00000311943 GABRPO00591 440 aa9.92□□□□□ -0.82
SCFD1-201ENST00000311943 SIGLEC5O15389 551 aa9.92□□□□□ -0.82
SCFD1-201ENST00000311943 NDUFB3O43676 98 aa9.92□□□□□ -0.82
SCFD1-201ENST00000311943 SULT1B1O43704 296 aa9.92□□□□□ -0.82
SCFD1-201ENST00000311943 GATBO75879 557 aaKnown RBP9.92□□□□□ -0.82
SCFD1-201ENST00000311943 SERPINA3P01011 423 aa9.92□□□□□ -0.82
SCFD1-201ENST00000311943 HSMCR30P0CW71 290 aa9.92□□□□□ -0.82
SCFD1-201ENST00000311943 KRTAP24-1Q3LI83 254 aa9.92□□□□□ -0.82
SCFD1-201ENST00000311943 ATPAF1Q5TC12 328 aaPredicted RBP9.92□□□□□ -0.82
SCFD1-201ENST00000311943 UTS2BQ765I0 119 aa9.92□□□□□ -0.82
SCFD1-201ENST00000311943 Q8N7P7 452 aa9.92□□□□□ -0.82
SCFD1-201ENST00000311943 GPR148Q8TDV2 347 aa9.92□□□□□ -0.82
SCFD1-201ENST00000311943 TMED9Q9BVK6 235 aa9.92□□□□□ -0.82
SCFD1-201ENST00000311943 ABCB9Q9NP78 766 aa9.92□□□□□ -0.82
SCFD1-201ENST00000311943 TRIM36Q9NQ86 728 aa9.92□□□□□ -0.82
SCFD1-201ENST00000311943 CHCHD3Q9NX63 227 aaKnown RBP9.92□□□□□ -0.82
SCFD1-201ENST00000311943 GSTK1Q9Y2Q3 226 aa9.92□□□□□ -0.82
SCFD1-201ENST00000311943 TRBV5-5A0A0J9YX44 114 aa9.92□□□□□ -0.82
SCFD1-201ENST00000311943 NOS1APO75052 506 aaPredicted RBP9.92□□□□□ -0.82
SCFD1-201ENST00000311943 CCDC159P0C7I6 412 aa9.92□□□□□ -0.82
SCFD1-201ENST00000311943 OCMP0CE72 109 aaPredicted RBP9.92□□□□□ -0.82
SCFD1-201ENST00000311943 CCL3L1P16619 93 aa9.92□□□□□ -0.82
SCFD1-201ENST00000311943 PRKACAP17612 351 aa9.92□□□□□ -0.82
SCFD1-201ENST00000311943 IL13RA1P78552 427 aa9.92□□□□□ -0.82
SCFD1-201ENST00000311943 CNN3Q15417 329 aaKnown RBP9.92□□□□□ -0.82
SCFD1-201ENST00000311943 CCDC58Q4VC31 144 aa9.92□□□□□ -0.82
SCFD1-201ENST00000311943 LIPKQ5VXJ0 399 aa9.92□□□□□ -0.82
SCFD1-201ENST00000311943 ZNF529Q6P280 563 aa9.92□□□□□ -0.82
SCFD1-201ENST00000311943 EMG1Q92979 244 aaKnown RBP9.92□□□□□ -0.82
SCFD1-201ENST00000311943 CDCA4Q9BXL8 241 aa9.92□□□□□ -0.82
SCFD1-201ENST00000311943 PKIBQ9C010 78 aa9.92□□□□□ -0.82
SCFD1-201ENST00000311943 SIRPDQ9H106 197 aa9.92□□□□□ -0.82
SCFD1-201ENST00000311943 ONECUT1Q9UBC0 465 aa9.92□□□□□ -0.82
SCFD1-201ENST00000311943 HSPB6O14558 160 aa9.91□□□□□ -0.82
SCFD1-201ENST00000311943 MAS1P04201 325 aa9.91□□□□□ -0.82
SCFD1-201ENST00000311943 TMEM225BP0DP42 221 aa9.91□□□□□ -0.82
SCFD1-201ENST00000311943 CAPZA1P52907 286 aa9.91□□□□□ -0.82
SCFD1-201ENST00000311943 ATP1B3P54709 279 aa9.91□□□□□ -0.82
SCFD1-201ENST00000311943 RPS25P62851 125 aaKnown RBP9.91□□□□□ -0.82
SCFD1-201ENST00000311943 SCN1BQ07699 218 aa9.91□□□□□ -0.82
SCFD1-201ENST00000311943 ZNF273Q14593 569 aa9.91□□□□□ -0.82
SCFD1-201ENST00000311943 SPHARQ15513 63 aa9.91□□□□□ -0.82
SCFD1-201ENST00000311943 UTF1Q5T230 341 aa9.91□□□□□ -0.82
SCFD1-201ENST00000311943 C17orf107Q6ZR85 190 aa9.91□□□□□ -0.82
SCFD1-201ENST00000311943 SLC36A1Q7Z2H8 476 aa9.91□□□□□ -0.82
SCFD1-201ENST00000311943 C17orf50Q8WW18 174 aa9.91□□□□□ -0.82
SCFD1-201ENST00000311943 C12orf43Q96C57 262 aaKnown RBP9.91□□□□□ -0.82
SCFD1-201ENST00000311943 MRPL48Q96GC5 212 aaKnown RBP9.91□□□□□ -0.82
SCFD1-201ENST00000311943 C1orf147Q96MC9 270 aaPredicted RBP9.91□□□□□ -0.82
SCFD1-201ENST00000311943 NR1H4Q96RI1 486 aaPredicted RBP9.91□□□□□ -0.82
SCFD1-201ENST00000311943 KCNK15Q9H427 330 aa9.91□□□□□ -0.82
SCFD1-201ENST00000311943 NEK6Q9HC98 313 aa9.91□□□□□ -0.82
SCFD1-201ENST00000311943 TNFRSF19Q9NS68 423 aa9.91□□□□□ -0.82
SCFD1-201ENST00000311943 ERGIC3Q9Y282 383 aa9.91□□□□□ -0.82
SCFD1-201ENST00000311943 PPIAL4CA0A0B4J2A2 164 aa9.9□□□□□ -0.82
SCFD1-201ENST00000311943 IRGMA1A4Y4 181 aa9.9□□□□□ -0.82
SCFD1-201ENST00000311943 SIRPB1O00241 398 aa9.9□□□□□ -0.82
SCFD1-201ENST00000311943 PPIAL4GP0DN37 164 aa9.9□□□□□ -0.82
SCFD1-201ENST00000311943 HNF1AP20823 631 aa9.9□□□□□ -0.82
SCFD1-201ENST00000311943 PIGYQ3MUY2 71 aa9.9□□□□□ -0.82
SCFD1-201ENST00000311943 ARMCX4Q5H9R4 360 aa9.9□□□□□ -0.82
SCFD1-201ENST00000311943 BRICD5Q6PL45 260 aa9.9□□□□□ -0.82
SCFD1-201ENST00000311943 BTNL3Q6UXE8 466 aa9.9□□□□□ -0.82
SCFD1-201ENST00000311943 BAIAP2L2Q6UXY1 529 aa9.9□□□□□ -0.82
SCFD1-201ENST00000311943 TCF23Q7RTU1 214 aa9.9□□□□□ -0.82
SCFD1-201ENST00000311943 ASCC1Q8N9N2 400 aaKnown RBP9.9□□□□□ -0.82
SCFD1-201ENST00000311943 LY6G5BQ8NDX9 201 aa9.9□□□□□ -0.82
SCFD1-201ENST00000311943 OR4S1Q8NGB4 309 aa9.9□□□□□ -0.82
SCFD1-201ENST00000311943 OR5D14Q8NGL3 314 aa9.9□□□□□ -0.82
SCFD1-201ENST00000311943 NANPQ8TBE9 248 aa9.9□□□□□ -0.82
SCFD1-201ENST00000311943 LHX4Q969G2 390 aa9.9□□□□□ -0.82
SCFD1-201ENST00000311943 SDSLQ96GA7 329 aa9.9□□□□□ -0.82
SCFD1-201ENST00000311943 WDFY2Q96P53 400 aa9.9□□□□□ -0.82
SCFD1-201ENST00000311943 ZNF184Q99676 751 aaPredicted RBP9.9□□□□□ -0.82
SCFD1-201ENST00000311943 MRI1Q9BV20 369 aa9.9□□□□□ -0.82
SCFD1-201ENST00000311943 FAM192AQ9GZU8 254 aa9.9□□□□□ -0.82
SCFD1-201ENST00000311943 NOX4Q9NPH5 578 aa9.9□□□□□ -0.82
SCFD1-201ENST00000311943 SCN3BQ9NY72 215 aa9.9□□□□□ -0.82
SCFD1-201ENST00000311943 LPAR3Q9UBY5 353 aa9.9□□□□□ -0.82
SCFD1-201ENST00000311943 POLDIP2Q9Y2S7 368 aa9.9□□□□□ -0.82
SCFD1-201ENST00000311943 CENPVL3A0A0U1RRI6 287 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms