RNA–Protein interactions for RNA: ENST00000308588.9

SNUPN-201, Transcript of snurportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNUPN, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-201ENST00000308588 GPER1Q99527 375 aa18.39■□□□□ 0.54
SNUPN-201ENST00000308588 RBFOX1Q9NWB1 397 aaKnown RBP18.39■□□□□ 0.54
SNUPN-201ENST00000308588 HIF1ANQ9NWT6 349 aa18.39■□□□□ 0.54
SNUPN-201ENST00000308588 CLN8Q9UBY8 286 aa18.39■□□□□ 0.54
SNUPN-201ENST00000308588 HIVEP2P31629 2446 aa18.39■□□□□ 0.53
SNUPN-201ENST00000308588 DOCK11Q5JSL3 2073 aa18.39■□□□□ 0.53
SNUPN-201ENST00000308588 TRAV20A0A0B4J274 112 aa18.39■□□□□ 0.53
SNUPN-201ENST00000308588 RFPL4AA6NLU0 287 aa18.39■□□□□ 0.53
SNUPN-201ENST00000308588 A8MV72 311 aaPredicted RBP18.39■□□□□ 0.53
SNUPN-201ENST00000308588 RFPL4AL1F8VTS6 287 aa18.39■□□□□ 0.53
SNUPN-201ENST00000308588 TRAPPC2LH3BP13 241 aa18.39■□□□□ 0.53
SNUPN-201ENST00000308588 CCRL2O00421 344 aa18.39■□□□□ 0.53
SNUPN-201ENST00000308588 RGS9O75916 674 aaPredicted RBP18.39■□□□□ 0.53
SNUPN-201ENST00000308588 KDM4BO94953 1096 aa18.39■□□□□ 0.53
SNUPN-201ENST00000308588 MAS1P04201 325 aa18.39■□□□□ 0.53
SNUPN-201ENST00000308588 TMEM225BP0DP42 221 aa18.39■□□□□ 0.53
SNUPN-201ENST00000308588 ZNF93P35789 620 aaPredicted RBP18.39■□□□□ 0.53
SNUPN-201ENST00000308588 SYT6Q5T7P8 510 aaPredicted RBP18.39■□□□□ 0.53
SNUPN-201ENST00000308588 SLC36A1Q7Z2H8 476 aa18.39■□□□□ 0.53
SNUPN-201ENST00000308588 Q8IYB0 196 aa18.39■□□□□ 0.53
SNUPN-201ENST00000308588 GAFA1Q96PS6 74 aa18.39■□□□□ 0.53
SNUPN-201ENST00000308588 A0A087WXM4 84 aa18.38■□□□□ 0.53
SNUPN-201ENST00000308588 DVL1O14640 695 aa18.38■□□□□ 0.53
SNUPN-201ENST00000308588 SFTPBP07988 381 aa18.38■□□□□ 0.53
SNUPN-201ENST00000308588 NEDD8Q15843 81 aa18.38■□□□□ 0.53
SNUPN-201ENST00000308588 HSD17B12Q53GQ0 312 aa18.38■□□□□ 0.53
SNUPN-201ENST00000308588 GLCCI1Q86VQ1 547 aa18.38■□□□□ 0.53
SNUPN-201ENST00000308588 LYPD6Q86Y78 171 aa18.38■□□□□ 0.53
SNUPN-201ENST00000308588 CD177Q8N6Q3 437 aa18.38■□□□□ 0.53
SNUPN-201ENST00000308588 PXT1Q8NFP0 134 aa18.38■□□□□ 0.53
SNUPN-201ENST00000308588 TNFAIP8L1Q8WVP5 186 aa18.38■□□□□ 0.53
SNUPN-201ENST00000308588 PHYHIPQ92561 330 aa18.38■□□□□ 0.53
SNUPN-201ENST00000308588 MMP26Q9NRE1 261 aa18.38■□□□□ 0.53
SNUPN-201ENST00000308588 KCNS2Q9ULS6 477 aa18.38■□□□□ 0.53
SNUPN-201ENST00000308588 MAB21L2Q9Y586 359 aa18.38■□□□□ 0.53
SNUPN-201ENST00000308588 KNG1P01042 644 aa18.37■□□□□ 0.53
SNUPN-201ENST00000308588 SELLP14151 372 aa18.37■□□□□ 0.53
SNUPN-201ENST00000308588 ADRA2CP18825 462 aa18.37■□□□□ 0.53
SNUPN-201ENST00000308588 SRMP19623 302 aa18.37■□□□□ 0.53
SNUPN-201ENST00000308588 PRDX2P32119 198 aa18.37■□□□□ 0.53
SNUPN-201ENST00000308588 PTGFRP43088 359 aa18.37■□□□□ 0.53
SNUPN-201ENST00000308588 GABRA2P47869 451 aa18.37■□□□□ 0.53
SNUPN-201ENST00000308588 OR3A4PP47883 348 aa18.37■□□□□ 0.53
SNUPN-201ENST00000308588 NPY4RP50391 375 aa18.37■□□□□ 0.53
SNUPN-201ENST00000308588 PAX2Q02962 417 aa18.37■□□□□ 0.53
SNUPN-201ENST00000308588 DGUOKQ16854 277 aa18.37■□□□□ 0.53
SNUPN-201ENST00000308588 CD200R1LQ6Q8B3 271 aa18.37■□□□□ 0.53
SNUPN-201ENST00000308588 ASCL4Q6XD76 172 aa18.37■□□□□ 0.53
SNUPN-201ENST00000308588 LRRTM1Q86UE6 522 aa18.37■□□□□ 0.53
SNUPN-201ENST00000308588 FAM58AQ8N1B3 248 aa18.37■□□□□ 0.53
SNUPN-201ENST00000308588 FGFRL1Q8N441 504 aa18.37■□□□□ 0.53
SNUPN-201ENST00000308588 EMG1Q92979 244 aaKnown RBP18.37■□□□□ 0.53
SNUPN-201ENST00000308588 SDSLQ96GA7 329 aa18.37■□□□□ 0.53
SNUPN-201ENST00000308588 TCF7L1Q9HCS4 588 aa18.37■□□□□ 0.53
SNUPN-201ENST00000308588 IL36RNQ9UBH0 155 aa18.37■□□□□ 0.53
SNUPN-201ENST00000308588 SONP18583 2426 aaKnown RBP18.36■□□□□ 0.53
SNUPN-201ENST00000308588 PPIAL4CA0A0B4J2A2 164 aa18.36■□□□□ 0.53
SNUPN-201ENST00000308588 NKX6-3A6NJ46 265 aa18.36■□□□□ 0.53
SNUPN-201ENST00000308588 SIGLEC5O15389 551 aa18.36■□□□□ 0.53
SNUPN-201ENST00000308588 CALCBP10092 127 aa18.36■□□□□ 0.53
SNUPN-201ENST00000308588 CEBPDP49716 269 aaPredicted RBP18.36■□□□□ 0.53
SNUPN-201ENST00000308588 IL13RA1P78552 427 aa18.36■□□□□ 0.53
SNUPN-201ENST00000308588 CDH26Q8IXH8 852 aa18.36■□□□□ 0.53
SNUPN-201ENST00000308588 MUL1Q969V5 352 aa18.36■□□□□ 0.53
SNUPN-201ENST00000308588 MED30Q96HR3 178 aa18.36■□□□□ 0.53
SNUPN-201ENST00000308588 HMG20AQ9NP66 347 aa18.36■□□□□ 0.53
SNUPN-201ENST00000308588 METRNQ9UJH8 293 aa18.36■□□□□ 0.53
SNUPN-201ENST00000308588 SVEP1Q4LDE5 3571 aa18.35■□□□□ 0.53
SNUPN-201ENST00000308588 MEGF11A6BM72 1044 aa18.35■□□□□ 0.53
SNUPN-201ENST00000308588 TRIM64CA6NLI5 447 aa18.35■□□□□ 0.53
SNUPN-201ENST00000308588 IKZF1Q13422 519 aa18.35■□□□□ 0.53
SNUPN-201ENST00000308588 ZNRF1Q8ND25 227 aa18.35■□□□□ 0.53
SNUPN-201ENST00000308588 DACT3Q96B18 629 aaPredicted RBP18.35■□□□□ 0.53
SNUPN-201ENST00000308588 NR1H4Q96RI1 486 aaPredicted RBP18.35■□□□□ 0.53
SNUPN-201ENST00000308588 FAM192AQ9GZU8 254 aa18.35■□□□□ 0.53
SNUPN-201ENST00000308588 RHOFQ9HBH0 211 aa18.35■□□□□ 0.53
SNUPN-201ENST00000308588 OR14J1Q9UGF5 321 aa18.35■□□□□ 0.53
SNUPN-201ENST00000308588 WNK2Q9Y3S1 2297 aa18.34■□□□□ 0.53
SNUPN-201ENST00000308588 INAFM1C9JVW0 142 aa18.34■□□□□ 0.53
SNUPN-201ENST00000308588 CDRT1O95170 752 aa18.34■□□□□ 0.53
SNUPN-201ENST00000308588 PRKACAP17612 351 aa18.34■□□□□ 0.53
SNUPN-201ENST00000308588 JAGN1Q8N5M9 183 aa18.34■□□□□ 0.53
SNUPN-201ENST00000308588 NKAIN3Q8N8D7 197 aa18.34■□□□□ 0.53
SNUPN-201ENST00000308588 PNLDC1Q8NA58 520 aaKnown RBP18.34■□□□□ 0.53
SNUPN-201ENST00000308588 CNTD2Q9H8S5 307 aa18.34■□□□□ 0.53
SNUPN-201ENST00000308588 OR5V1Q9UGF6 321 aa18.34■□□□□ 0.53
SNUPN-201ENST00000308588 FN1P02751 2386 aaKnown RBP18.34■□□□□ 0.53
SNUPN-201ENST00000308588 LOC105371242A0A075B767 164 aa18.33■□□□□ 0.53
SNUPN-201ENST00000308588 TRDV1A0A1B0GX56 115 aa18.33■□□□□ 0.53
SNUPN-201ENST00000308588 C22orf46C9J442 243 aa18.33■□□□□ 0.53
SNUPN-201ENST00000308588 NDUFB3O43676 98 aa18.33■□□□□ 0.53
SNUPN-201ENST00000308588 ARL6IP5O75915 188 aa18.33■□□□□ 0.53
SNUPN-201ENST00000308588 ZNF146Q15072 292 aa18.33■□□□□ 0.53
SNUPN-201ENST00000308588 CR1LQ2VPA4 569 aa18.33■□□□□ 0.53
SNUPN-201ENST00000308588 ELP2Q6IA86 826 aa18.33■□□□□ 0.53
SNUPN-201ENST00000308588 Q8NFD4 153 aa18.33■□□□□ 0.53
SNUPN-201ENST00000308588 SEBOXQ9HB31 216 aaPredicted RBP18.33■□□□□ 0.53
SNUPN-201ENST00000308588 TMEM160Q9NX00 188 aa18.33■□□□□ 0.53
SNUPN-201ENST00000308588 NSD1Q96L73 2696 aaPredicted RBP18.33■□□□□ 0.52
SNUPN-201ENST00000308588 A0A0G2JMP0 313 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms