RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 SOD3P08294 240 aa11.28□□□□□ -0.6
COL8A1-202ENST00000273342 MTCP1P56278 107 aa11.28□□□□□ -0.6
COL8A1-202ENST00000273342 DLK1P80370 383 aa11.28□□□□□ -0.6
COL8A1-202ENST00000273342 SURF2Q15527 256 aaPredicted RBP11.28□□□□□ -0.6
COL8A1-202ENST00000273342 CRIP3Q6Q6R5 217 aa11.28□□□□□ -0.6
COL8A1-202ENST00000273342 CYB561D1Q8N8Q1 229 aa11.28□□□□□ -0.6
COL8A1-202ENST00000273342 NTNG2Q96CW9 530 aa11.28□□□□□ -0.6
COL8A1-202ENST00000273342 SMOC1Q9H4F8 434 aa11.28□□□□□ -0.6
COL8A1-202ENST00000273342 TUBA4BQ9H853 241 aa11.28□□□□□ -0.6
COL8A1-202ENST00000273342 FBLN5Q9UBX5 448 aa11.28□□□□□ -0.6
COL8A1-202ENST00000273342 AK3Q9UIJ7 227 aa11.28□□□□□ -0.6
COL8A1-202ENST00000273342 TUBD1Q9UJT1 453 aa11.28□□□□□ -0.6
COL8A1-202ENST00000273342 GATCO43716 136 aaKnown RBP11.27□□□□□ -0.6
COL8A1-202ENST00000273342 CDX1P47902 265 aaPredicted RBP11.27□□□□□ -0.6
COL8A1-202ENST00000273342 AFF3P51826 1226 aaKnown RBP11.27□□□□□ -0.6
COL8A1-202ENST00000273342 RND3P61587 244 aa11.27□□□□□ -0.6
COL8A1-202ENST00000273342 DCAF7P61962 342 aa11.27□□□□□ -0.6
COL8A1-202ENST00000273342 HNF4GQ14541 408 aa11.27□□□□□ -0.6
COL8A1-202ENST00000273342 RSU1Q15404 277 aa11.27□□□□□ -0.6
COL8A1-202ENST00000273342 TMEM176BQ3YBM2 270 aaPredicted RBP11.27□□□□□ -0.6
COL8A1-202ENST00000273342 DOK3Q7L591 496 aa11.27□□□□□ -0.6
COL8A1-202ENST00000273342 SLC38A9Q8NBW4 561 aa11.27□□□□□ -0.6
COL8A1-202ENST00000273342 SUCNR1Q9BXA5 334 aa11.27□□□□□ -0.6
COL8A1-202ENST00000273342 HS3ST3A1Q9Y663 406 aa11.27□□□□□ -0.6
COL8A1-202ENST00000273342 TRIOBPQ9H2D6 2365 aa11.27□□□□□ -0.6
COL8A1-202ENST00000273342 CPAMD8Q8IZJ3 1885 aa11.27□□□□□ -0.6
COL8A1-202ENST00000273342 ZNF726A6NNF4 738 aa11.27□□□□□ -0.61
COL8A1-202ENST00000273342 ZNF43P17038 809 aa11.27□□□□□ -0.61
COL8A1-202ENST00000273342 THEM4Q5T1C6 240 aa11.27□□□□□ -0.61
COL8A1-202ENST00000273342 SLC22A25Q6T423 547 aa11.27□□□□□ -0.61
COL8A1-202ENST00000273342 DMRTC2Q8IXT2 367 aaPredicted RBP11.27□□□□□ -0.61
COL8A1-202ENST00000273342 TMEM123Q8N131 208 aa11.27□□□□□ -0.61
COL8A1-202ENST00000273342 MUCL1Q96DR8 90 aa11.27□□□□□ -0.61
COL8A1-202ENST00000273342 MRPL13Q9BYD1 178 aaKnown RBP11.27□□□□□ -0.61
COL8A1-202ENST00000273342 CHST5Q9GZS9 411 aa11.27□□□□□ -0.61
COL8A1-202ENST00000273342 TREM2Q9NZC2 230 aa11.27□□□□□ -0.61
COL8A1-202ENST00000273342 MMACHCQ9Y4U1 282 aa11.27□□□□□ -0.61
COL8A1-202ENST00000273342 RBFOX3A6NFN3 312 aa11.27□□□□□ -0.61
COL8A1-202ENST00000273342 GPR137BO60478 399 aa11.27□□□□□ -0.61
COL8A1-202ENST00000273342 HIST1H2BKO60814 126 aa11.27□□□□□ -0.61
COL8A1-202ENST00000273342 HIST1H2BJP06899 126 aa11.27□□□□□ -0.61
COL8A1-202ENST00000273342 CTSDP07339 412 aaPredicted RBP11.27□□□□□ -0.61
COL8A1-202ENST00000273342 PGA4P0DJD7 388 aa11.27□□□□□ -0.61
COL8A1-202ENST00000273342 PGA3P0DJD8 388 aa11.27□□□□□ -0.61
COL8A1-202ENST00000273342 HIST1H2BOP23527 126 aa11.27□□□□□ -0.61
COL8A1-202ENST00000273342 ATP6V0CP27449 155 aa11.27□□□□□ -0.61
COL8A1-202ENST00000273342 HIST1H2BBP33778 126 aa11.27□□□□□ -0.61
COL8A1-202ENST00000273342 CSNK1A1P48729 337 aa11.27□□□□□ -0.61
COL8A1-202ENST00000273342 CLDN17P56750 224 aa11.27□□□□□ -0.61
COL8A1-202ENST00000273342 HIST1H2BDP58876 126 aa11.27□□□□□ -0.61
COL8A1-202ENST00000273342 HIST1H2BCP62807 126 aa11.27□□□□□ -0.61
COL8A1-202ENST00000273342 HIST2H2BEQ16778 126 aa11.27□□□□□ -0.61
COL8A1-202ENST00000273342 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.27□□□□□ -0.61
COL8A1-202ENST00000273342 SSX9Q7RTT3 188 aa11.27□□□□□ -0.61
COL8A1-202ENST00000273342 FAM89BQ8N5H3 189 aa11.27□□□□□ -0.61
COL8A1-202ENST00000273342 NOXO1Q8NFA2 376 aa11.27□□□□□ -0.61
COL8A1-202ENST00000273342 PHOSPHO2Q8TCD6 241 aa11.27□□□□□ -0.61
COL8A1-202ENST00000273342 RHBDD1Q8TEB9 315 aa11.27□□□□□ -0.61
COL8A1-202ENST00000273342 HIST1H2BHQ93079 126 aa11.27□□□□□ -0.61
COL8A1-202ENST00000273342 INTS12Q96CB8 462 aaKnown RBP11.27□□□□□ -0.61
COL8A1-202ENST00000273342 HIST1H2BNQ99877 126 aa11.27□□□□□ -0.61
COL8A1-202ENST00000273342 HIST1H2BMQ99879 126 aa11.27□□□□□ -0.61
COL8A1-202ENST00000273342 SLC2A9Q9NRM0 540 aa11.27□□□□□ -0.61
COL8A1-202ENST00000273342 WNT16Q9UBV4 365 aa11.27□□□□□ -0.61
COL8A1-202ENST00000273342 ZNF724A8MTY0 619 aa11.26□□□□□ -0.61
COL8A1-202ENST00000273342 H3BMH7 237 aa11.26□□□□□ -0.61
COL8A1-202ENST00000273342 ST8SIA3O43173 380 aa11.26□□□□□ -0.61
COL8A1-202ENST00000273342 SSSCA1O60232 199 aa11.26□□□□□ -0.61
COL8A1-202ENST00000273342 SPINK2P20155 84 aa11.26□□□□□ -0.61
COL8A1-202ENST00000273342 ZNF41P51814 821 aaPredicted RBP11.26□□□□□ -0.61
COL8A1-202ENST00000273342 C17orf67Q0P5P2 114 aa11.26□□□□□ -0.61
COL8A1-202ENST00000273342 TMEM187Q14656 261 aa11.26□□□□□ -0.61
COL8A1-202ENST00000273342 PIGYQ3MUY2 71 aa11.26□□□□□ -0.61
COL8A1-202ENST00000273342 PRAMEF20Q5VT98 475 aa11.26□□□□□ -0.61
COL8A1-202ENST00000273342 ZNF429Q86V71 674 aa11.26□□□□□ -0.61
COL8A1-202ENST00000273342 SLC35G3Q8N808 338 aa11.26□□□□□ -0.61
COL8A1-202ENST00000273342 ZNF610Q8N9Z0 462 aa11.26□□□□□ -0.61
COL8A1-202ENST00000273342 HPSE2Q8WWQ2 592 aa11.26□□□□□ -0.61
COL8A1-202ENST00000273342 GINS3Q9BRX5 216 aa11.26□□□□□ -0.61
COL8A1-202ENST00000273342 RBM24Q9BX46 236 aaKnown RBP11.26□□□□□ -0.61
COL8A1-202ENST00000273342 PNRC2Q9NPJ4 139 aaKnown RBP11.26□□□□□ -0.61
COL8A1-202ENST00000273342 PPP4R1LQ9P1A2 415 aa11.26□□□□□ -0.61
COL8A1-202ENST00000273342 TLCD2A6NGC4 264 aa11.26□□□□□ -0.61
COL8A1-202ENST00000273342 SERPINE3A8MV23 424 aa11.26□□□□□ -0.61
COL8A1-202ENST00000273342 H3BP45 60 aa11.26□□□□□ -0.61
COL8A1-202ENST00000273342 GALNSP34059 522 aa11.26□□□□□ -0.61
COL8A1-202ENST00000273342 EWSR1Q01844 656 aaKnown RBP eCLIP11.26□□□□□ -0.61
COL8A1-202ENST00000273342 ELOBQ15370 118 aa11.26□□□□□ -0.61
COL8A1-202ENST00000273342 OR2T2Q6IF00 324 aa11.26□□□□□ -0.61
COL8A1-202ENST00000273342 SLC39A7Q92504 469 aa11.26□□□□□ -0.61
COL8A1-202ENST00000273342 C14orf144Q96I85 54 aa11.26□□□□□ -0.61
COL8A1-202ENST00000273342 NUDT16L1Q9BRJ7 211 aaKnown RBP11.26□□□□□ -0.61
COL8A1-202ENST00000273342 NAA60Q9H7X0 242 aa11.26□□□□□ -0.61
COL8A1-202ENST00000273342 NKX2-6A6NCS4 301 aa11.25□□□□□ -0.61
COL8A1-202ENST00000273342 CD63P08962 238 aa11.25□□□□□ -0.61
COL8A1-202ENST00000273342 IGFBP4P22692 258 aa11.25□□□□□ -0.61
COL8A1-202ENST00000273342 GUCA1AP43080 201 aaPredicted RBP11.25□□□□□ -0.61
COL8A1-202ENST00000273342 ZP4Q12836 540 aa11.25□□□□□ -0.61
COL8A1-202ENST00000273342 GNMTQ14749 295 aa11.25□□□□□ -0.61
COL8A1-202ENST00000273342 CLEC12BQ2HXU8 276 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms