RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 GLB1P16278 677 aa10.81□□□□□ -0.68
CHMP3-201ENST00000263856 THBS4P35443 961 aa10.81□□□□□ -0.68
CHMP3-201ENST00000263856 ZNF774Q6NX45 483 aa10.81□□□□□ -0.68
CHMP3-201ENST00000263856 NEK7Q8TDX7 302 aa10.81□□□□□ -0.68
CHMP3-201ENST00000263856 NUDT16L1Q9BRJ7 211 aaKnown RBP10.81□□□□□ -0.68
CHMP3-201ENST00000263856 NELFAQ9H3P2 528 aa10.81□□□□□ -0.68
CHMP3-201ENST00000263856 SLC2A9Q9NRM0 540 aa10.81□□□□□ -0.68
CHMP3-201ENST00000263856 CST7O76096 145 aa10.8□□□□□ -0.68
CHMP3-201ENST00000263856 F10P00742 488 aa10.8□□□□□ -0.68
CHMP3-201ENST00000263856 FBP1P09467 338 aa10.8□□□□□ -0.68
CHMP3-201ENST00000263856 B4GALT1P15291 398 aa10.8□□□□□ -0.68
CHMP3-201ENST00000263856 RAB5AP20339 215 aa10.8□□□□□ -0.68
CHMP3-201ENST00000263856 SLC35A1P78382 337 aa10.8□□□□□ -0.68
CHMP3-201ENST00000263856 ZNF561Q8N587 486 aa10.8□□□□□ -0.68
CHMP3-201ENST00000263856 SUMF2Q8NBJ7 301 aa10.8□□□□□ -0.68
CHMP3-201ENST00000263856 CHST5Q9GZS9 411 aa10.8□□□□□ -0.68
CHMP3-201ENST00000263856 NAA60Q9H7X0 242 aa10.8□□□□□ -0.68
CHMP3-201ENST00000263856 DKKL1Q9UK85 242 aa10.8□□□□□ -0.68
CHMP3-201ENST00000263856 FRYQ5TBA9 3013 aa10.8□□□□□ -0.68
CHMP3-201ENST00000263856 NSG1A0A0A6YYJ2 146 aa10.8□□□□□ -0.68
CHMP3-201ENST00000263856 YIF1AO95070 293 aa10.8□□□□□ -0.68
CHMP3-201ENST00000263856 MT-ND4LP03901 98 aa10.8□□□□□ -0.68
CHMP3-201ENST00000263856 HEXAP06865 529 aa10.8□□□□□ -0.68
CHMP3-201ENST00000263856 PRF1P14222 555 aa10.8□□□□□ -0.68
CHMP3-201ENST00000263856 PTGDSP41222 190 aa10.8□□□□□ -0.68
CHMP3-201ENST00000263856 IL15RAQ13261 267 aa10.8□□□□□ -0.68
CHMP3-201ENST00000263856 HNF4GQ14541 408 aa10.8□□□□□ -0.68
CHMP3-201ENST00000263856 GNMTQ14749 295 aa10.8□□□□□ -0.68
CHMP3-201ENST00000263856 C9orf135Q5VTT2 229 aa10.8□□□□□ -0.68
CHMP3-201ENST00000263856 RHBDD2Q6NTF9 364 aa10.8□□□□□ -0.68
CHMP3-201ENST00000263856 FAM89BQ8N5H3 189 aa10.8□□□□□ -0.68
CHMP3-201ENST00000263856 WDSUB1Q8N9V3 476 aa10.8□□□□□ -0.68
CHMP3-201ENST00000263856 GSN-AS1Q9NRJ2 163 aa10.8□□□□□ -0.68
CHMP3-201ENST00000263856 RARRES3Q9UL19 164 aa10.8□□□□□ -0.68
CHMP3-201ENST00000263856 CCDC187A0A096LP49 1063 aa10.79□□□□□ -0.68
CHMP3-201ENST00000263856 DHHO43323 396 aa10.79□□□□□ -0.68
CHMP3-201ENST00000263856 SSSCA1O60232 199 aa10.79□□□□□ -0.68
CHMP3-201ENST00000263856 POLR2GP62487 172 aaKnown RBP eCLIP10.79□□□□□ -0.68
CHMP3-201ENST00000263856 SOHLH1Q5JUK2 328 aa10.79□□□□□ -0.68
CHMP3-201ENST00000263856 GUSBP11Q6P575 273 aa10.79□□□□□ -0.68
CHMP3-201ENST00000263856 SMRP1Q8NCR6 262 aa10.79□□□□□ -0.68
CHMP3-201ENST00000263856 OR2G3Q8NGZ4 309 aa10.79□□□□□ -0.68
CHMP3-201ENST00000263856 OR6S1Q8NH40 331 aa10.79□□□□□ -0.68
CHMP3-201ENST00000263856 SPTSSAQ969W0 71 aa10.79□□□□□ -0.68
CHMP3-201ENST00000263856 SPACA9Q96E40 222 aaPredicted RBP10.79□□□□□ -0.68
CHMP3-201ENST00000263856 P4HTMQ9NXG6 502 aa10.79□□□□□ -0.68
CHMP3-201ENST00000263856 ANAPC10Q9UM13 185 aa10.79□□□□□ -0.68
CHMP3-201ENST00000263856 ST3GAL6Q9Y274 331 aa10.79□□□□□ -0.68
CHMP3-201ENST00000263856 NPIPB13A6NJU9 1138 aa10.79□□□□□ -0.68
CHMP3-201ENST00000263856 AQP7P3A6NL99 342 aa10.79□□□□□ -0.68
CHMP3-201ENST00000263856 CEACAM18A8MTB9 384 aa10.79□□□□□ -0.68
CHMP3-201ENST00000263856 NPIPB4C9JG80 1138 aa10.79□□□□□ -0.68
CHMP3-201ENST00000263856 H3BP45 60 aa10.79□□□□□ -0.68
CHMP3-201ENST00000263856 ST8SIA3O43173 380 aa10.79□□□□□ -0.68
CHMP3-201ENST00000263856 OR2C1O95371 312 aa10.79□□□□□ -0.68
CHMP3-201ENST00000263856 IGLV3-19P01714 112 aa10.79□□□□□ -0.68
CHMP3-201ENST00000263856 HTR5AP47898 357 aa10.79□□□□□ -0.68
CHMP3-201ENST00000263856 ENDOGQ14249 297 aaKnown RBP10.79□□□□□ -0.68
CHMP3-201ENST00000263856 CRIP3Q6Q6R5 217 aa10.79□□□□□ -0.68
CHMP3-201ENST00000263856 PP6455Q8WZ26 134 aa10.79□□□□□ -0.68
CHMP3-201ENST00000263856 BCL2L14Q9BZR8 327 aa10.79□□□□□ -0.68
CHMP3-201ENST00000263856 PLEKHA2Q9HB19 425 aa10.79□□□□□ -0.68
CHMP3-201ENST00000263856 SLC7A11Q9UPY5 501 aa10.79□□□□□ -0.68
CHMP3-201ENST00000263856 UBE2J1Q9Y385 318 aaPredicted RBP10.79□□□□□ -0.68
CHMP3-201ENST00000263856 TIMM10BQ9Y5J6 103 aa10.79□□□□□ -0.68
CHMP3-201ENST00000263856 C5orf52A6NGY3 159 aa10.79□□□□□ -0.68
CHMP3-201ENST00000263856 MSTNO14793 375 aa10.79□□□□□ -0.68
CHMP3-201ENST00000263856 NAT2P11245 290 aa10.79□□□□□ -0.68
CHMP3-201ENST00000263856 EPHA1P21709 976 aa10.79□□□□□ -0.68
CHMP3-201ENST00000263856 FAM3AP98173 230 aa10.79□□□□□ -0.68
CHMP3-201ENST00000263856 SHBQ15464 509 aa10.79□□□□□ -0.68
CHMP3-201ENST00000263856 SLC25A24Q6NUK1 477 aa10.79□□□□□ -0.68
CHMP3-201ENST00000263856 C17orf82Q86X59 251 aaPredicted RBP10.79□□□□□ -0.68
CHMP3-201ENST00000263856 SLC35G3Q8N808 338 aa10.79□□□□□ -0.68
CHMP3-201ENST00000263856 Q96M66 194 aa10.79□□□□□ -0.68
CHMP3-201ENST00000263856 ZNF84P51523 738 aa10.78□□□□□ -0.68
CHMP3-201ENST00000263856 ZNF133P52736 654 aaPredicted RBP10.78□□□□□ -0.68
CHMP3-201ENST00000263856 NDUFA6P56556 154 aa10.78□□□□□ -0.68
CHMP3-201ENST00000263856 RUNX1Q01196 453 aa10.78□□□□□ -0.68
CHMP3-201ENST00000263856 HGFACQ04756 655 aa10.78□□□□□ -0.68
CHMP3-201ENST00000263856 ZNF674Q2M3X9 581 aa10.78□□□□□ -0.68
CHMP3-201ENST00000263856 PLCXD3Q63HM9 321 aa10.78□□□□□ -0.68
CHMP3-201ENST00000263856 ZNF343Q6P1L6 599 aa10.78□□□□□ -0.68
CHMP3-201ENST00000263856 ZNF574Q6ZN55 896 aaPredicted RBP10.78□□□□□ -0.68
CHMP3-201ENST00000263856 UBAC2Q8NBM4 344 aa10.78□□□□□ -0.68
CHMP3-201ENST00000263856 PBDC1Q9BVG4 233 aa10.78□□□□□ -0.68
CHMP3-201ENST00000263856 MTCH2Q9Y6C9 303 aa10.78□□□□□ -0.68
CHMP3-201ENST00000263856 DMDP11532 3685 aa10.78□□□□□ -0.68
CHMP3-201ENST00000263856 IGKV1-27A0A075B6S5 117 aa10.78□□□□□ -0.68
CHMP3-201ENST00000263856 GPR137BO60478 399 aa10.78□□□□□ -0.68
CHMP3-201ENST00000263856 CLN5O75503 358 aa10.78□□□□□ -0.68
CHMP3-201ENST00000263856 CHATP28329 748 aa10.78□□□□□ -0.68
CHMP3-201ENST00000263856 MSX1P28360 303 aa10.78□□□□□ -0.68
CHMP3-201ENST00000263856 GNRHRP30968 328 aa10.78□□□□□ -0.68
CHMP3-201ENST00000263856 VAMP2P63027 116 aa10.78□□□□□ -0.68
CHMP3-201ENST00000263856 CCL20P78556 96 aa10.78□□□□□ -0.68
CHMP3-201ENST00000263856 TLE1Q04724 770 aa10.78□□□□□ -0.68
CHMP3-201ENST00000263856 KIAA0141Q14154 515 aaPredicted RBP10.78□□□□□ -0.68
CHMP3-201ENST00000263856 TMEM187Q14656 261 aa10.78□□□□□ -0.68
CHMP3-201ENST00000263856 SURF2Q15527 256 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms