RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 H3F3AP84243 136 aa10.83□□□□□ -0.68
CHMP2B-201ENST00000263780 NSDHLQ15738 373 aa10.83□□□□□ -0.68
CHMP2B-201ENST00000263780 TAF9Q16594 264 aa10.83□□□□□ -0.68
CHMP2B-201ENST00000263780 HAGHQ16775 308 aa10.83□□□□□ -0.68
CHMP2B-201ENST00000263780 TMEM176BQ3YBM2 270 aaPredicted RBP10.83□□□□□ -0.68
CHMP2B-201ENST00000263780 ZNF343Q6P1L6 599 aa10.83□□□□□ -0.68
CHMP2B-201ENST00000263780 SLC25A47Q6Q0C1 308 aa10.83□□□□□ -0.68
CHMP2B-201ENST00000263780 FIP1L1Q6UN15 594 aaKnown RBP10.83□□□□□ -0.68
CHMP2B-201ENST00000263780 ZFP62Q8NB50 900 aaPredicted RBP10.83□□□□□ -0.68
CHMP2B-201ENST00000263780 OR4D5Q8NGN0 318 aa10.83□□□□□ -0.68
CHMP2B-201ENST00000263780 RAB24Q969Q5 203 aa10.83□□□□□ -0.68
CHMP2B-201ENST00000263780 CRISPLD2Q9H0B8 497 aa10.83□□□□□ -0.68
CHMP2B-201ENST00000263780 ZNF319Q9P2F9 582 aa10.83□□□□□ -0.68
CHMP2B-201ENST00000263780 CCDC187A0A096LP49 1063 aa10.82□□□□□ -0.68
CHMP2B-201ENST00000263780 A0A0U1RQV5 110 aa10.82□□□□□ -0.68
CHMP2B-201ENST00000263780 ZNF732B4DXR9 585 aa10.82□□□□□ -0.68
CHMP2B-201ENST00000263780 H0YL77 283 aa10.82□□□□□ -0.68
CHMP2B-201ENST00000263780 TRGC1P0CF51 173 aa10.82□□□□□ -0.68
CHMP2B-201ENST00000263780 PGA4P0DJD7 388 aa10.82□□□□□ -0.68
CHMP2B-201ENST00000263780 PGA3P0DJD8 388 aa10.82□□□□□ -0.68
CHMP2B-201ENST00000263780 FGF7P21781 194 aa10.82□□□□□ -0.68
CHMP2B-201ENST00000263780 ICAM4Q14773 271 aa10.82□□□□□ -0.68
CHMP2B-201ENST00000263780 ZNF542PQ5EBM4 170 aa10.82□□□□□ -0.68
CHMP2B-201ENST00000263780 DPPA2Q7Z7J5 298 aa10.82□□□□□ -0.68
CHMP2B-201ENST00000263780 SLC22A18ASQ8N1D0 253 aa10.82□□□□□ -0.68
CHMP2B-201ENST00000263780 OR10AD1Q8NGE0 317 aa10.82□□□□□ -0.68
CHMP2B-201ENST00000263780 OR52M1Q8NGK5 317 aa10.82□□□□□ -0.68
CHMP2B-201ENST00000263780 MSI2Q96DH6 328 aaKnown RBP10.82□□□□□ -0.68
CHMP2B-201ENST00000263780 RCC1LQ96I51 464 aaKnown RBP10.82□□□□□ -0.68
CHMP2B-201ENST00000263780 Q96M66 194 aa10.82□□□□□ -0.68
CHMP2B-201ENST00000263780 PACRGQ96M98 296 aaPredicted RBP10.82□□□□□ -0.68
CHMP2B-201ENST00000263780 LIPGQ9Y5X9 500 aa10.82□□□□□ -0.68
CHMP2B-201ENST00000263780 SPTY2D1-AS1A0A0U1RR47 76 aa10.82□□□□□ -0.68
CHMP2B-201ENST00000263780 CDRT15L2A8MXV6 281 aa10.82□□□□□ -0.68
CHMP2B-201ENST00000263780 CLDN34H7C241 214 aa10.82□□□□□ -0.68
CHMP2B-201ENST00000263780 DVL1O14640 695 aa10.82□□□□□ -0.68
CHMP2B-201ENST00000263780 DHRS3O75911 302 aa10.82□□□□□ -0.68
CHMP2B-201ENST00000263780 NR2C1P13056 603 aa10.82□□□□□ -0.68
CHMP2B-201ENST00000263780 PAX1P15863 534 aa10.82□□□□□ -0.68
CHMP2B-201ENST00000263780 GUCA1AP43080 201 aaPredicted RBP10.82□□□□□ -0.68
CHMP2B-201ENST00000263780 LSM6P62312 80 aaKnown RBP10.82□□□□□ -0.68
CHMP2B-201ENST00000263780 C1orf61Q13536 156 aa10.82□□□□□ -0.68
CHMP2B-201ENST00000263780 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.82□□□□□ -0.68
CHMP2B-201ENST00000263780 FAM185AQ8N0U4 392 aa10.82□□□□□ -0.68
CHMP2B-201ENST00000263780 CYB561D1Q8N8Q1 229 aa10.82□□□□□ -0.68
CHMP2B-201ENST00000263780 JSRP1Q96MG2 331 aaPredicted RBP10.82□□□□□ -0.68
CHMP2B-201ENST00000263780 METTL9Q9H1A3 318 aa10.82□□□□□ -0.68
CHMP2B-201ENST00000263780 PNRC2Q9NPJ4 139 aaKnown RBP10.82□□□□□ -0.68
CHMP2B-201ENST00000263780 SLC2A9Q9NRM0 540 aa10.82□□□□□ -0.68
CHMP2B-201ENST00000263780 TP53TG5Q9Y2B4 290 aa10.82□□□□□ -0.68
CHMP2B-201ENST00000263780 PTRH2Q9Y3E5 179 aaKnown RBP10.82□□□□□ -0.68
CHMP2B-201ENST00000263780 HS3ST3B1Q9Y662 390 aa10.82□□□□□ -0.68
CHMP2B-201ENST00000263780 SLCO1B1Q9Y6L6 691 aa10.82□□□□□ -0.68
CHMP2B-201ENST00000263780 V9GYS6 101 aa10.82□□□□□ -0.68
CHMP2B-201ENST00000263780 RER1O15258 196 aa10.81□□□□□ -0.68
CHMP2B-201ENST00000263780 TLX3O43711 291 aaPredicted RBP10.81□□□□□ -0.68
CHMP2B-201ENST00000263780 IGLV3-1P01715 115 aa10.81□□□□□ -0.68
CHMP2B-201ENST00000263780 CEACAM6P40199 344 aa10.81□□□□□ -0.68
CHMP2B-201ENST00000263780 RND2P52198 227 aa10.81□□□□□ -0.68
CHMP2B-201ENST00000263780 RPL23AP62750 156 aaKnown RBP10.81□□□□□ -0.68
CHMP2B-201ENST00000263780 VAMP2P63027 116 aa10.81□□□□□ -0.68
CHMP2B-201ENST00000263780 BAXQ07812 192 aa10.81□□□□□ -0.68
CHMP2B-201ENST00000263780 OR6X1Q8NH79 312 aa10.81□□□□□ -0.68
CHMP2B-201ENST00000263780 NPRL2Q8WTW4 380 aa10.81□□□□□ -0.68
CHMP2B-201ENST00000263780 ZNF160Q9HCG1 818 aa10.81□□□□□ -0.68
CHMP2B-201ENST00000263780 NXT1Q9UKK6 140 aaKnown RBP10.81□□□□□ -0.68
CHMP2B-201ENST00000263780 ARID1BQ8NFD5 2236 aaPredicted RBP10.81□□□□□ -0.68
CHMP2B-201ENST00000263780 MED19A0JLT2 244 aaPredicted RBP10.81□□□□□ -0.68
CHMP2B-201ENST00000263780 PHF1O43189 567 aaPredicted RBP10.81□□□□□ -0.68
CHMP2B-201ENST00000263780 CEACAM1P13688 526 aa10.81□□□□□ -0.68
CHMP2B-201ENST00000263780 MMP9P14780 707 aa10.81□□□□□ -0.68
CHMP2B-201ENST00000263780 NKX2-1P43699 371 aaPredicted RBP10.81□□□□□ -0.68
CHMP2B-201ENST00000263780 NOVA1P51513 510 aaKnown RBP10.81□□□□□ -0.68
CHMP2B-201ENST00000263780 TCEAL6Q6IPX3 200 aa10.81□□□□□ -0.68
CHMP2B-201ENST00000263780 NUDT22Q9BRQ3 303 aa10.81□□□□□ -0.68
CHMP2B-201ENST00000263780 NKX2-4Q9H2Z4 354 aa10.81□□□□□ -0.68
CHMP2B-201ENST00000263780 B3GAT1Q9P2W7 334 aa10.81□□□□□ -0.68
CHMP2B-201ENST00000263780 FOXD3Q9UJU5 478 aaPredicted RBP10.81□□□□□ -0.68
CHMP2B-201ENST00000263780 VDAC3Q9Y277 283 aa10.81□□□□□ -0.68
CHMP2B-201ENST00000263780 A0A087WZY1 265 aa10.8□□□□□ -0.68
CHMP2B-201ENST00000263780 LILRA5A6NI73 299 aa10.8□□□□□ -0.68
CHMP2B-201ENST00000263780 SEMA4FO95754 770 aa10.8□□□□□ -0.68
CHMP2B-201ENST00000263780 OPN1MWP04001 364 aa10.8□□□□□ -0.68
CHMP2B-201ENST00000263780 OPN1MW2P0DN77 364 aa10.8□□□□□ -0.68
CHMP2B-201ENST00000263780 OPN1MW3P0DN78 364 aa10.8□□□□□ -0.68
CHMP2B-201ENST00000263780 FOLR1P15328 257 aa10.8□□□□□ -0.68
CHMP2B-201ENST00000263780 KLK2P20151 261 aa10.8□□□□□ -0.68
CHMP2B-201ENST00000263780 CDAP32320 146 aa10.8□□□□□ -0.68
CHMP2B-201ENST00000263780 FXYD4P59646 89 aa10.8□□□□□ -0.68
CHMP2B-201ENST00000263780 HERV-K104P61576 105 aa10.8□□□□□ -0.68
CHMP2B-201ENST00000263780 PHLDA2Q53GA4 152 aa10.8□□□□□ -0.68
CHMP2B-201ENST00000263780 PDZD11Q5EBL8 140 aa10.8□□□□□ -0.68
CHMP2B-201ENST00000263780 GFI1BQ5VTD9 330 aa10.8□□□□□ -0.68
CHMP2B-201ENST00000263780 BEND2Q8NDZ0 799 aa10.8□□□□□ -0.68
CHMP2B-201ENST00000263780 OR5L2Q8NGL0 311 aa10.8□□□□□ -0.68
CHMP2B-201ENST00000263780 OR5L1Q8NGL2 311 aa10.8□□□□□ -0.68
CHMP2B-201ENST00000263780 CLDND2Q8NHS1 167 aa10.8□□□□□ -0.68
CHMP2B-201ENST00000263780 PHOSPHO2Q8TCD6 241 aa10.8□□□□□ -0.68
CHMP2B-201ENST00000263780 RNASEH2CQ8TDP1 164 aaKnown RBP10.8□□□□□ -0.68
CHMP2B-201ENST00000263780 MRGPRX4Q96LA9 322 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms