RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 GEMIN2O14893 280 aaKnown RBP8.2□□□□□ -1.1
SNRNP40-201ENST00000263694 NXPH2O95156 264 aa8.2□□□□□ -1.1
SNRNP40-201ENST00000263694 APOA1P02647 267 aa8.2□□□□□ -1.1
SNRNP40-201ENST00000263694 CD55P08174 381 aa8.2□□□□□ -1.1
SNRNP40-201ENST00000263694 INHBBP09529 407 aa8.2□□□□□ -1.1
SNRNP40-201ENST00000263694 PRKACAP17612 351 aa8.2□□□□□ -1.1
SNRNP40-201ENST00000263694 RAB6AP20340 208 aa8.2□□□□□ -1.1
SNRNP40-201ENST00000263694 GABRR1P24046 479 aa8.2□□□□□ -1.1
SNRNP40-201ENST00000263694 COL8A2P25067 703 aa8.2□□□□□ -1.1
SNRNP40-201ENST00000263694 CD80P33681 288 aa8.2□□□□□ -1.1
SNRNP40-201ENST00000263694 GATA4P43694 442 aa8.2□□□□□ -1.1
SNRNP40-201ENST00000263694 CEBPDP49716 269 aaPredicted RBP8.2□□□□□ -1.1
SNRNP40-201ENST00000263694 KRTAP10-9P60411 292 aa8.2□□□□□ -1.1
SNRNP40-201ENST00000263694 ERVK11-1P61568 191 aa8.2□□□□□ -1.1
SNRNP40-201ENST00000263694 RPS27AP62979 156 aaKnown RBP8.2□□□□□ -1.1
SNRNP40-201ENST00000263694 SFRP4Q6FHJ7 346 aaPredicted RBP8.2□□□□□ -1.1
SNRNP40-201ENST00000263694 BRICD5Q6PL45 260 aa8.2□□□□□ -1.1
SNRNP40-201ENST00000263694 FAM131AQ6UXB0 335 aa8.2□□□□□ -1.1
SNRNP40-201ENST00000263694 OR2W3Q7Z3T1 314 aa8.2□□□□□ -1.1
SNRNP40-201ENST00000263694 FAM58AQ8N1B3 248 aa8.2□□□□□ -1.1
SNRNP40-201ENST00000263694 OSR2Q8N2R0 312 aa8.2□□□□□ -1.1
SNRNP40-201ENST00000263694 CELF2-AS1Q8N7Q2 184 aa8.2□□□□□ -1.1
SNRNP40-201ENST00000263694 OR5T2Q8NGG2 359 aa8.2□□□□□ -1.1
SNRNP40-201ENST00000263694 GCDHQ92947 438 aaPredicted RBP8.2□□□□□ -1.1
SNRNP40-201ENST00000263694 EMG1Q92979 244 aaKnown RBP8.2□□□□□ -1.1
SNRNP40-201ENST00000263694 S100A16Q96FQ6 103 aaKnown RBP8.2□□□□□ -1.1
SNRNP40-201ENST00000263694 WDFY2Q96P53 400 aa8.2□□□□□ -1.1
SNRNP40-201ENST00000263694 DIRC2Q96SL1 478 aa8.2□□□□□ -1.1
SNRNP40-201ENST00000263694 NRIP2Q9BQI9 281 aa8.2□□□□□ -1.1
SNRNP40-201ENST00000263694 MRI1Q9BV20 369 aa8.2□□□□□ -1.1
SNRNP40-201ENST00000263694 CST11Q9H112 138 aa8.2□□□□□ -1.1
SNRNP40-201ENST00000263694 ZMAT3Q9HA38 289 aaKnown RBP8.2□□□□□ -1.1
SNRNP40-201ENST00000263694 FN3KRPQ9HA64 309 aa8.2□□□□□ -1.1
SNRNP40-201ENST00000263694 IL36GQ9NZH8 169 aa8.2□□□□□ -1.1
SNRNP40-201ENST00000263694 GHRLQ9UBU3 117 aa8.2□□□□□ -1.1
SNRNP40-201ENST00000263694 FBLN5Q9UBX5 448 aa8.2□□□□□ -1.1
SNRNP40-201ENST00000263694 ST3GAL6Q9Y274 331 aa8.2□□□□□ -1.1
SNRNP40-201ENST00000263694 V9GYH0 126 aa8.2□□□□□ -1.1
SNRNP40-201ENST00000263694 ABCA12Q86UK0 2595 aa8.2□□□□□ -1.1
SNRNP40-201ENST00000263694 TANC2Q9HCD6 1990 aa8.19□□□□□ -1.1
SNRNP40-201ENST00000263694 POLQO75417 2590 aa8.19□□□□□ -1.1
SNRNP40-201ENST00000263694 TRAV18A0A075B6X5 111 aa8.19□□□□□ -1.1
SNRNP40-201ENST00000263694 A0A0G2JMP0 313 aa8.19□□□□□ -1.1
SNRNP40-201ENST00000263694 A0A0X1KG70 313 aa8.19□□□□□ -1.1
SNRNP40-201ENST00000263694 FABP12A6NFH5 140 aa8.19□□□□□ -1.1
SNRNP40-201ENST00000263694 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.19□□□□□ -1.1
SNRNP40-201ENST00000263694 RAB27BO00194 218 aa8.19□□□□□ -1.1
SNRNP40-201ENST00000263694 TMEM127O75204 238 aa8.19□□□□□ -1.1
SNRNP40-201ENST00000263694 GTF2F2P13984 249 aa8.19□□□□□ -1.1
SNRNP40-201ENST00000263694 GLRA1P23415 457 aa8.19□□□□□ -1.1
SNRNP40-201ENST00000263694 PITPNBP48739 271 aa8.19□□□□□ -1.1
SNRNP40-201ENST00000263694 PPOXP50336 477 aa8.19□□□□□ -1.1
SNRNP40-201ENST00000263694 TMEM50BP56557 158 aa8.19□□□□□ -1.1
SNRNP40-201ENST00000263694 SCAND1P57086 179 aa8.19□□□□□ -1.1
SNRNP40-201ENST00000263694 SCN1BQ07699 218 aa8.19□□□□□ -1.1
SNRNP40-201ENST00000263694 RNASE12Q5GAN4 147 aaKnown RBP8.19□□□□□ -1.1
SNRNP40-201ENST00000263694 FAM209AQ5JX71 171 aa8.19□□□□□ -1.1
SNRNP40-201ENST00000263694 OLFML2AQ68BL7 652 aa8.19□□□□□ -1.1
SNRNP40-201ENST00000263694 SIGIRRQ6IA17 410 aa8.19□□□□□ -1.1
SNRNP40-201ENST00000263694 LIAT1Q6ZQX7 453 aa8.19□□□□□ -1.1
SNRNP40-201ENST00000263694 SNX29P2Q8IUI4 249 aa8.19□□□□□ -1.1
SNRNP40-201ENST00000263694 GCSAMQ8N6F7 178 aa8.19□□□□□ -1.1
SNRNP40-201ENST00000263694 POC1AQ8NBT0 407 aa8.19□□□□□ -1.1
SNRNP40-201ENST00000263694 CHST4Q8NCG5 386 aa8.19□□□□□ -1.1
SNRNP40-201ENST00000263694 Q8NFD4 153 aa8.19□□□□□ -1.1
SNRNP40-201ENST00000263694 OR4M2Q8NGB6 313 aa8.19□□□□□ -1.1
SNRNP40-201ENST00000263694 CCL17Q92583 94 aa8.19□□□□□ -1.1
SNRNP40-201ENST00000263694 Q96M66 194 aa8.19□□□□□ -1.1
SNRNP40-201ENST00000263694 ABHD1Q96SE0 405 aa8.19□□□□□ -1.1
SNRNP40-201ENST00000263694 SOSTQ9BQB4 213 aa8.19□□□□□ -1.1
SNRNP40-201ENST00000263694 EGLN1Q9GZT9 426 aa8.19□□□□□ -1.1
SNRNP40-201ENST00000263694 HMG20AQ9NP66 347 aa8.19□□□□□ -1.1
SNRNP40-201ENST00000263694 POLDIP2Q9Y2S7 368 aa8.19□□□□□ -1.1
SNRNP40-201ENST00000263694 NOS1APO75052 506 aaPredicted RBP8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 ZNF780AO75290 641 aaPredicted RBP8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 GOSR1O95249 250 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 LHBP01229 141 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 TNFRSF1AP19438 455 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 BLVRBP30043 206 aaPredicted RBP8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 PTH2RP49190 550 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 CAPZA1P52907 286 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 RBM11P57052 281 aaKnown RBP8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 FGF12P61328 243 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 IL18Q14116 193 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 GPR176Q14439 515 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 TESK1Q15569 626 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 ZNF79Q15937 498 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 PCGF3Q3KNV8 242 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 PLAC9Q5JTB6 97 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 SPANXN2Q5MJ10 180 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 ELP2Q6IA86 826 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 ACP7Q6ZNF0 438 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 DEFB108BQ8NET1 73 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 OR10R2Q8NGX6 335 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 RAB40AQ8WXH6 277 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 YIPF5Q969M3 257 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 PTX4Q96A99 478 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 CMTM3Q96MX0 182 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 TM2D1Q9BX74 207 aa8.18□□□□□ -1.1
SNRNP40-201ENST00000263694 HES4Q9HCC6 221 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms