RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 FGF8P55075 233 aaPredicted RBP11.33□□□□□ -0.6
SNX1-201ENST00000261889 CCDC54Q8NEL0 328 aa11.33□□□□□ -0.6
SNX1-201ENST00000261889 MEGF10Q96KG7 1140 aa11.33□□□□□ -0.6
SNX1-201ENST00000261889 PAPOLGQ9BWT3 736 aaKnown RBP11.33□□□□□ -0.6
SNX1-201ENST00000261889 TMPRSS5Q9H3S3 457 aa11.33□□□□□ -0.6
SNX1-201ENST00000261889 LRP4O75096 1905 aa11.32□□□□□ -0.6
SNX1-201ENST00000261889 SNAPC5O75971 98 aa11.32□□□□□ -0.6
SNX1-201ENST00000261889 IGHG1P01857 330 aa11.32□□□□□ -0.6
SNX1-201ENST00000261889 IFNA4P05014 189 aa11.32□□□□□ -0.6
SNX1-201ENST00000261889 MRPS21P82921 87 aaKnown RBP11.32□□□□□ -0.6
SNX1-201ENST00000261889 NAAAQ02083 359 aa11.32□□□□□ -0.6
SNX1-201ENST00000261889 GTF3C1Q12789 2109 aa11.32□□□□□ -0.6
SNX1-201ENST00000261889 ZNF239Q16600 458 aaKnown RBP11.32□□□□□ -0.6
SNX1-201ENST00000261889 CXorf66Q5JRM2 361 aaPredicted RBP11.32□□□□□ -0.6
SNX1-201ENST00000261889 NECAP1Q8NC96 275 aa11.32□□□□□ -0.6
SNX1-201ENST00000261889 OR14K1Q8NGZ2 314 aa11.32□□□□□ -0.6
SNX1-201ENST00000261889 POC1BQ8TC44 478 aa11.32□□□□□ -0.6
SNX1-201ENST00000261889 CLDN23Q96B33 292 aa11.32□□□□□ -0.6
SNX1-201ENST00000261889 C1orf123Q9NWV4 160 aa11.32□□□□□ -0.6
SNX1-201ENST00000261889 IL36RNQ9UBH0 155 aa11.32□□□□□ -0.6
SNX1-201ENST00000261889 HS3ST3B1Q9Y662 390 aa11.32□□□□□ -0.6
SNX1-201ENST00000261889 A0A1B0GV90 55 aa11.32□□□□□ -0.6
SNX1-201ENST00000261889 A0A1W2PPC4 97 aa11.32□□□□□ -0.6
SNX1-201ENST00000261889 A6NIZ1 184 aa11.32□□□□□ -0.6
SNX1-201ENST00000261889 APOBEC1P41238 236 aaKnown RBP11.32□□□□□ -0.6
SNX1-201ENST00000261889 RAP1BP61224 184 aa11.32□□□□□ -0.6
SNX1-201ENST00000261889 RAP1AP62834 184 aa11.32□□□□□ -0.6
SNX1-201ENST00000261889 SOHLH1Q5JUK2 328 aa11.32□□□□□ -0.6
SNX1-201ENST00000261889 DMBX1Q8NFW5 382 aa11.32□□□□□ -0.6
SNX1-201ENST00000261889 TMEM234Q8WY98 164 aa11.32□□□□□ -0.6
SNX1-201ENST00000261889 THRSPQ92748 146 aa11.32□□□□□ -0.6
SNX1-201ENST00000261889 ALKBH3Q96Q83 286 aaPredicted RBP11.32□□□□□ -0.6
SNX1-201ENST00000261889 CA14Q9ULX7 337 aa11.32□□□□□ -0.6
SNX1-201ENST00000261889 TIMM10BQ9Y5J6 103 aa11.32□□□□□ -0.6
SNX1-201ENST00000261889 CHD3Q12873 2000 aaKnown RBP11.32□□□□□ -0.6
SNX1-201ENST00000261889 NKX2-6A6NCS4 301 aa11.31□□□□□ -0.6
SNX1-201ENST00000261889 TRAF3IP2O43734 574 aaPredicted RBP11.31□□□□□ -0.6
SNX1-201ENST00000261889 PGA4P0DJD7 388 aa11.31□□□□□ -0.6
SNX1-201ENST00000261889 PGA3P0DJD8 388 aa11.31□□□□□ -0.6
SNX1-201ENST00000261889 TAGLN2P37802 199 aaKnown RBP11.31□□□□□ -0.6
SNX1-201ENST00000261889 HSD11B2P80365 405 aa11.31□□□□□ -0.6
SNX1-201ENST00000261889 NKAIN1Q4KMZ8 207 aa11.31□□□□□ -0.6
SNX1-201ENST00000261889 VAX1Q5SQQ9 334 aa11.31□□□□□ -0.6
SNX1-201ENST00000261889 CYB5R2Q6BCY4 276 aa11.31□□□□□ -0.6
SNX1-201ENST00000261889 VASH2Q86V25 355 aa11.31□□□□□ -0.6
SNX1-201ENST00000261889 LHFPL1Q86WI0 220 aa11.31□□□□□ -0.6
SNX1-201ENST00000261889 FBXL14Q8N1E6 418 aa11.31□□□□□ -0.6
SNX1-201ENST00000261889 CYB561D1Q8N8Q1 229 aa11.31□□□□□ -0.6
SNX1-201ENST00000261889 NOXO1Q8NFA2 376 aa11.31□□□□□ -0.6
SNX1-201ENST00000261889 DDIT4LQ96D03 193 aa11.31□□□□□ -0.6
SNX1-201ENST00000261889 TP53RKQ96S44 253 aa11.31□□□□□ -0.6
SNX1-201ENST00000261889 FBRSQ9HAH7 460 aa11.31□□□□□ -0.6
SNX1-201ENST00000261889 PLA2G3Q9NZ20 509 aa11.31□□□□□ -0.6
SNX1-201ENST00000261889 SPENQ96T58 3664 aaKnown RBP11.31□□□□□ -0.6
SNX1-201ENST00000261889 ADAMTS9Q9P2N4 1935 aa11.31□□□□□ -0.6
SNX1-201ENST00000261889 IGKV1-27A0A075B6S5 117 aa11.31□□□□□ -0.6
SNX1-201ENST00000261889 CYB5BO43169 146 aa11.31□□□□□ -0.6
SNX1-201ENST00000261889 IGLV3-19P01714 112 aa11.31□□□□□ -0.6
SNX1-201ENST00000261889 MT-ND4LP03901 98 aa11.31□□□□□ -0.6
SNX1-201ENST00000261889 CHRM2P08172 466 aa11.31□□□□□ -0.6
SNX1-201ENST00000261889 RSU1Q15404 277 aa11.31□□□□□ -0.6
SNX1-201ENST00000261889 FAHD2BQ6P2I3 314 aaPredicted RBP11.31□□□□□ -0.6
SNX1-201ENST00000261889 SLC23A3Q6PIS1 610 aa11.31□□□□□ -0.6
SNX1-201ENST00000261889 PRR18Q8N4B5 295 aa11.31□□□□□ -0.6
SNX1-201ENST00000261889 ZNF561Q8N587 486 aa11.31□□□□□ -0.6
SNX1-201ENST00000261889 SUMF2Q8NBJ7 301 aa11.31□□□□□ -0.6
SNX1-201ENST00000261889 OR2G3Q8NGZ4 309 aa11.31□□□□□ -0.6
SNX1-201ENST00000261889 FAHD2AQ96GK7 314 aa11.31□□□□□ -0.6
SNX1-201ENST00000261889 HS3ST6Q96QI5 342 aa11.31□□□□□ -0.6
SNX1-201ENST00000261889 PNRC2Q9NPJ4 139 aaKnown RBP11.31□□□□□ -0.6
SNX1-201ENST00000261889 UBE2CO00762 179 aa11.31□□□□□ -0.6
SNX1-201ENST00000261889 OR7C1O76099 320 aaPredicted RBP11.31□□□□□ -0.6
SNX1-201ENST00000261889 TRGC2P03986 189 aa11.31□□□□□ -0.6
SNX1-201ENST00000261889 HEXBP07686 556 aa11.31□□□□□ -0.6
SNX1-201ENST00000261889 GSTP1P09211 210 aaKnown RBP11.31□□□□□ -0.6
SNX1-201ENST00000261889 PET100P0DJ07 73 aa11.31□□□□□ -0.6
SNX1-201ENST00000261889 ZNF728P0DKX0 622 aa11.31□□□□□ -0.6
SNX1-201ENST00000261889 CFPP27918 469 aa11.31□□□□□ -0.6
SNX1-201ENST00000261889 ERVFRD-1P60508 538 aa11.31□□□□□ -0.6
SNX1-201ENST00000261889 HLA-BQ31612 363 aa11.31□□□□□ -0.6
SNX1-201ENST00000261889 UBALD2Q8IYN6 164 aa11.31□□□□□ -0.6
SNX1-201ENST00000261889 SLC35G3Q8N808 338 aa11.31□□□□□ -0.6
SNX1-201ENST00000261889 C15orf54Q8N8G6 183 aa11.31□□□□□ -0.6
SNX1-201ENST00000261889 OR5T1Q8NG75 326 aa11.31□□□□□ -0.6
SNX1-201ENST00000261889 FAM212BQ9NTI7 297 aaPredicted RBP11.31□□□□□ -0.6
SNX1-201ENST00000261889 MEMO1Q9Y316 297 aa11.31□□□□□ -0.6
SNX1-201ENST00000261889 HOXC4P09017 264 aaPredicted RBP11.3□□□□□ -0.6
SNX1-201ENST00000261889 CSNK1A1P48729 337 aa11.3□□□□□ -0.6
SNX1-201ENST00000261889 IL15RAQ13261 267 aa11.3□□□□□ -0.6
SNX1-201ENST00000261889 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.3□□□□□ -0.6
SNX1-201ENST00000261889 RAET1LQ5VY80 246 aa11.3□□□□□ -0.6
SNX1-201ENST00000261889 EIF5AL1Q6IS14 154 aaKnown RBP11.3□□□□□ -0.6
SNX1-201ENST00000261889 CPAMD8Q8IZJ3 1885 aa11.3□□□□□ -0.6
SNX1-201ENST00000261889 WDSUB1Q8N9V3 476 aa11.3□□□□□ -0.6
SNX1-201ENST00000261889 UBAC2Q8NBM4 344 aa11.3□□□□□ -0.6
SNX1-201ENST00000261889 ZFP92A6NM28 416 aa11.3□□□□□ -0.6
SNX1-201ENST00000261889 TERTO14746 1132 aaKnown RBP11.3□□□□□ -0.6
SNX1-201ENST00000261889 FABP4P15090 132 aa11.3□□□□□ -0.6
SNX1-201ENST00000261889 AGAP20933 346 aa11.3□□□□□ -0.6
SNX1-201ENST00000261889 TUBG1P23258 451 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms