RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 FAM90A8PA6NJQ4 464 aa17.07■□□□□ 0.32
NEDD8-201ENST00000250495 GATBO75879 557 aaKnown RBP17.07■□□□□ 0.32
NEDD8-201ENST00000250495 SERPINA3P01011 423 aa17.07■□□□□ 0.32
NEDD8-201ENST00000250495 PIPP12273 146 aaPredicted RBP17.07■□□□□ 0.32
NEDD8-201ENST00000250495 FUT6P51993 359 aa17.07■□□□□ 0.32
NEDD8-201ENST00000250495 ODF4Q2M2E3 257 aa17.07■□□□□ 0.32
NEDD8-201ENST00000250495 ZNF782Q6ZMW2 699 aaPredicted RBP17.07■□□□□ 0.32
NEDD8-201ENST00000250495 CATSPERDQ86XM0 798 aa17.07■□□□□ 0.32
NEDD8-201ENST00000250495 PIFOQ8TCI5 191 aa17.07■□□□□ 0.32
NEDD8-201ENST00000250495 TBX5Q99593 518 aa17.07■□□□□ 0.32
NEDD8-201ENST00000250495 ZNF184Q99676 751 aaPredicted RBP17.07■□□□□ 0.32
NEDD8-201ENST00000250495 CDCA4Q9BXL8 241 aa17.07■□□□□ 0.32
NEDD8-201ENST00000250495 GABARAPL1Q9H0R8 117 aa17.07■□□□□ 0.32
NEDD8-201ENST00000250495 TBL2Q9Y4P3 447 aaKnown RBP17.07■□□□□ 0.32
NEDD8-201ENST00000250495 AP4S1Q9Y587 144 aa17.07■□□□□ 0.32
NEDD8-201ENST00000250495 VGLL3A8MV65 326 aa17.06■□□□□ 0.32
NEDD8-201ENST00000250495 SULT1C4O75897 302 aa17.06■□□□□ 0.32
NEDD8-201ENST00000250495 RBP4P02753 201 aa17.06■□□□□ 0.32
NEDD8-201ENST00000250495 ZNF728P0DKX0 622 aa17.06■□□□□ 0.32
NEDD8-201ENST00000250495 HTR1FP30939 366 aa17.06■□□□□ 0.32
NEDD8-201ENST00000250495 ATP6V1E1P36543 226 aa17.06■□□□□ 0.32
NEDD8-201ENST00000250495 DLX6P56179 175 aa17.06■□□□□ 0.32
NEDD8-201ENST00000250495 UBE2V2Q15819 145 aa17.06■□□□□ 0.32
NEDD8-201ENST00000250495 GDPD3Q7L5L3 318 aa17.06■□□□□ 0.32
NEDD8-201ENST00000250495 SSX6Q7RTT6 188 aa17.06■□□□□ 0.32
NEDD8-201ENST00000250495 C1QL4Q86Z23 238 aa17.06■□□□□ 0.32
NEDD8-201ENST00000250495 KLHDC1Q8N7A1 406 aa17.06■□□□□ 0.32
NEDD8-201ENST00000250495 CFHR4Q92496 578 aa17.06■□□□□ 0.32
NEDD8-201ENST00000250495 MALSU1Q96EH3 234 aa17.06■□□□□ 0.32
NEDD8-201ENST00000250495 CEP19Q96LK0 163 aa17.06■□□□□ 0.32
NEDD8-201ENST00000250495 MTCH1Q9NZJ7 389 aa17.06■□□□□ 0.32
NEDD8-201ENST00000250495 FOXJ3Q9UPW0 622 aa17.06■□□□□ 0.32
NEDD8-201ENST00000250495 A0A1W2PQL4 384 aaPredicted RBP17.05■□□□□ 0.32
NEDD8-201ENST00000250495 ZNF737O75373 536 aa17.05■□□□□ 0.32
NEDD8-201ENST00000250495 ARG1P05089 322 aa17.05■□□□□ 0.32
NEDD8-201ENST00000250495 EDDM3BP56851 147 aa17.05■□□□□ 0.32
NEDD8-201ENST00000250495 TMED1Q13445 227 aa17.05■□□□□ 0.32
NEDD8-201ENST00000250495 OGFRL1Q5TC84 451 aaPredicted RBP17.05■□□□□ 0.32
NEDD8-201ENST00000250495 LHFPL4Q7Z7J7 247 aa17.05■□□□□ 0.32
NEDD8-201ENST00000250495 EGFL6Q8IUX8 553 aa17.05■□□□□ 0.32
NEDD8-201ENST00000250495 OR10H4Q8NGA5 316 aa17.05■□□□□ 0.32
NEDD8-201ENST00000250495 FOXRED1Q96CU9 486 aaPredicted RBP17.05■□□□□ 0.32
NEDD8-201ENST00000250495 C10orf35Q96D05 121 aa17.05■□□□□ 0.32
NEDD8-201ENST00000250495 BORCS8Q96FH0 119 aa17.05■□□□□ 0.32
NEDD8-201ENST00000250495 SNX22Q96L94 193 aa17.05■□□□□ 0.32
NEDD8-201ENST00000250495 NKX3-1Q99801 234 aaPredicted RBP17.05■□□□□ 0.32
NEDD8-201ENST00000250495 ABCB10Q9NRK6 738 aa17.05■□□□□ 0.32
NEDD8-201ENST00000250495 CHST1O43916 411 aa17.04■□□□□ 0.32
NEDD8-201ENST00000250495 FCGR1AP12314 374 aa17.04■□□□□ 0.32
NEDD8-201ENST00000250495 MEF2CQ06413 473 aaPredicted RBP17.04■□□□□ 0.32
NEDD8-201ENST00000250495 FAM189A2Q15884 450 aa17.04■□□□□ 0.32
NEDD8-201ENST00000250495 AMIGO2Q86SJ2 522 aa17.04■□□□□ 0.32
NEDD8-201ENST00000250495 OR8H2Q8N162 312 aa17.04■□□□□ 0.32
NEDD8-201ENST00000250495 C11orf44Q8N8P7 122 aa17.04■□□□□ 0.32
NEDD8-201ENST00000250495 OR11H6Q8NGC7 330 aa17.04■□□□□ 0.32
NEDD8-201ENST00000250495 OR8J1Q8NGP2 316 aa17.04■□□□□ 0.32
NEDD8-201ENST00000250495 CIB1Q99828 191 aa17.04■□□□□ 0.32
NEDD8-201ENST00000250495 CHST5Q9GZS9 411 aa17.04■□□□□ 0.32
NEDD8-201ENST00000250495 SEBOXQ9HB31 216 aaPredicted RBP17.04■□□□□ 0.32
NEDD8-201ENST00000250495 PITPNC1Q9UKF7 332 aa17.04■□□□□ 0.32
NEDD8-201ENST00000250495 F8VVB4 439 aa17.03■□□□□ 0.32
NEDD8-201ENST00000250495 F8VWA3 439 aa17.03■□□□□ 0.32
NEDD8-201ENST00000250495 H3BSH0 61 aa17.03■□□□□ 0.32
NEDD8-201ENST00000250495 INMTO95050 263 aa17.03■□□□□ 0.32
NEDD8-201ENST00000250495 VSIG10L2P0DP72 767 aa17.03■□□□□ 0.32
NEDD8-201ENST00000250495 CNN3Q15417 329 aaKnown RBP17.03■□□□□ 0.32
NEDD8-201ENST00000250495 ZNF626Q68DY1 528 aa17.03■□□□□ 0.32
NEDD8-201ENST00000250495 SLC25A26Q70HW3 274 aa17.03■□□□□ 0.32
NEDD8-201ENST00000250495 Q8IYB0 196 aa17.03■□□□□ 0.32
NEDD8-201ENST00000250495 ENTHD1Q8IYW4 607 aa17.03■□□□□ 0.32
NEDD8-201ENST00000250495 RPS4Y2Q8TD47 263 aa17.03■□□□□ 0.32
NEDD8-201ENST00000250495 RFKQ969G6 155 aa17.03■□□□□ 0.32
NEDD8-201ENST00000250495 SLAMF9Q96A28 289 aa17.03■□□□□ 0.32
NEDD8-201ENST00000250495 ZNF714Q96N38 554 aa17.03■□□□□ 0.32
NEDD8-201ENST00000250495 TCF19Q9Y242 345 aa17.03■□□□□ 0.32
NEDD8-201ENST00000250495 DSCAML1Q8TD84 2053 aa17.03■□□□□ 0.32
NEDD8-201ENST00000250495 IGKV1-27A0A075B6S5 117 aa17.02■□□□□ 0.32
NEDD8-201ENST00000250495 hADV38S2A0JD32 116 aa17.02■□□□□ 0.32
NEDD8-201ENST00000250495 ODF3BA8MYP8 253 aa17.02■□□□□ 0.32
NEDD8-201ENST00000250495 OPN1MWP04001 364 aa17.02■□□□□ 0.32
NEDD8-201ENST00000250495 OPN1MW2P0DN77 364 aa17.02■□□□□ 0.32
NEDD8-201ENST00000250495 OPN1MW3P0DN78 364 aa17.02■□□□□ 0.32
NEDD8-201ENST00000250495 IGHV1-8P0DP01 117 aa17.02■□□□□ 0.32
NEDD8-201ENST00000250495 PEX2P28328 305 aa17.02■□□□□ 0.32
NEDD8-201ENST00000250495 RAB13P51153 203 aa17.02■□□□□ 0.32
NEDD8-201ENST00000250495 ATP1B3P54709 279 aa17.02■□□□□ 0.32
NEDD8-201ENST00000250495 SSX2Q16385 188 aa17.02■□□□□ 0.32
NEDD8-201ENST00000250495 PLA1AQ53H76 456 aa17.02■□□□□ 0.32
NEDD8-201ENST00000250495 IZUMO2Q6UXV1 221 aa17.02■□□□□ 0.32
NEDD8-201ENST00000250495 FAM220AQ7Z4H9 259 aa17.02■□□□□ 0.32
NEDD8-201ENST00000250495 DYNAPQ8N1N2 210 aa17.02■□□□□ 0.32
NEDD8-201ENST00000250495 PP6455Q8WZ26 134 aa17.02■□□□□ 0.32
NEDD8-201ENST00000250495 APOL3O95236 402 aa17.01■□□□□ 0.31
NEDD8-201ENST00000250495 CYB5AP00167 134 aa17.01■□□□□ 0.31
NEDD8-201ENST00000250495 UBCP0CG48 685 aaKnown RBP17.01■□□□□ 0.31
NEDD8-201ENST00000250495 POLR2IP36954 125 aaKnown RBP17.01■□□□□ 0.31
NEDD8-201ENST00000250495 RBP2P50120 134 aa17.01■□□□□ 0.31
NEDD8-201ENST00000250495 OR12D2P58182 307 aa17.01■□□□□ 0.31
NEDD8-201ENST00000250495 DYNC1I2Q13409 638 aaKnown RBP17.01■□□□□ 0.31
NEDD8-201ENST00000250495 PRSS35Q8N3Z0 413 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms