RNA–Protein interactions for RNA: ENST00000238112.7

CPSF3-201, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-201ENST00000238112 PCP4L1A6NKN8 68 aa16.25■□□□□ 0.19
CPSF3-201ENST00000238112 OR8U9P0C7N5 309 aa16.25■□□□□ 0.19
CPSF3-201ENST00000238112 HOXA1P49639 335 aaPredicted RBP16.25■□□□□ 0.19
CPSF3-201ENST00000238112 CARD18P57730 90 aa16.25■□□□□ 0.19
CPSF3-201ENST00000238112 PEA15Q15121 130 aa16.25■□□□□ 0.19
CPSF3-201ENST00000238112 ASCL4Q6XD76 172 aa16.25■□□□□ 0.19
CPSF3-201ENST00000238112 OR2Y1Q8NGV0 311 aa16.25■□□□□ 0.19
CPSF3-201ENST00000238112 OR8U1Q8NH10 309 aa16.25■□□□□ 0.19
CPSF3-201ENST00000238112 OR14L1PQ8NHC6 308 aa16.25■□□□□ 0.19
CPSF3-201ENST00000238112 CPT1CQ8TCG5 803 aa16.25■□□□□ 0.19
CPSF3-201ENST00000238112 ERGIC1Q969X5 290 aa16.25■□□□□ 0.19
CPSF3-201ENST00000238112 NTNG2Q96CW9 530 aa16.25■□□□□ 0.19
CPSF3-201ENST00000238112 MARS2Q96GW9 593 aaKnown RBP16.25■□□□□ 0.19
CPSF3-201ENST00000238112 ZNF286AQ9HBT8 521 aa16.25■□□□□ 0.19
CPSF3-201ENST00000238112 BIN3Q9NQY0 253 aa16.25■□□□□ 0.19
CPSF3-201ENST00000238112 ZNF391Q9UJN7 358 aa16.25■□□□□ 0.19
CPSF3-201ENST00000238112 ARID1AO14497 2285 aa16.25■□□□□ 0.19
CPSF3-201ENST00000238112 BORCS7-ASMTA0A0B4J1R7 106 aa16.25■□□□□ 0.19
CPSF3-201ENST00000238112 FAM221AA4D161 298 aa16.25■□□□□ 0.19
CPSF3-201ENST00000238112 OR6C6A6NF89 314 aa16.25■□□□□ 0.19
CPSF3-201ENST00000238112 PATE4P0C8F1 98 aa16.25■□□□□ 0.19
CPSF3-201ENST00000238112 RPL35P42766 123 aaKnown RBP16.25■□□□□ 0.19
CPSF3-201ENST00000238112 ZNF528Q3MIS6 628 aa16.25■□□□□ 0.19
CPSF3-201ENST00000238112 TSPO2Q5TGU0 170 aa16.25■□□□□ 0.19
CPSF3-201ENST00000238112 AAED1Q7RTV5 226 aa16.25■□□□□ 0.19
CPSF3-201ENST00000238112 LYZL2Q7Z4W2 148 aa16.25■□□□□ 0.19
CPSF3-201ENST00000238112 YRDCQ86U90 279 aaKnown RBP16.25■□□□□ 0.19
CPSF3-201ENST00000238112 FBXL14Q8N1E6 418 aa16.25■□□□□ 0.19
CPSF3-201ENST00000238112 RXFP4Q8TDU9 374 aa16.25■□□□□ 0.19
CPSF3-201ENST00000238112 SLC2A9Q9NRM0 540 aa16.25■□□□□ 0.19
CPSF3-201ENST00000238112 LHX6Q9UPM6 363 aa16.25■□□□□ 0.19
CPSF3-201ENST00000238112 SLC7A11Q9UPY5 501 aa16.25■□□□□ 0.19
CPSF3-201ENST00000238112 ST3GAL6Q9Y274 331 aa16.25■□□□□ 0.19
CPSF3-201ENST00000238112 SIT1Q9Y3P8 196 aa16.25■□□□□ 0.19
CPSF3-201ENST00000238112 TERTO14746 1132 aaKnown RBP16.24■□□□□ 0.19
CPSF3-201ENST00000238112 DIRAS3O95661 229 aa16.24■□□□□ 0.19
CPSF3-201ENST00000238112 TSPAN15O95858 294 aa16.24■□□□□ 0.19
CPSF3-201ENST00000238112 CCL4P13236 92 aa16.24■□□□□ 0.19
CPSF3-201ENST00000238112 ZNF468Q5VIY5 522 aaPredicted RBP16.24■□□□□ 0.19
CPSF3-201ENST00000238112 TMEM42Q69YG0 159 aa16.24■□□□□ 0.19
CPSF3-201ENST00000238112 CLEC9AQ6UXN8 241 aa16.24■□□□□ 0.19
CPSF3-201ENST00000238112 LIAT1Q6ZQX7 453 aa16.24■□□□□ 0.19
CPSF3-201ENST00000238112 SKA3Q8IX90 412 aa16.24■□□□□ 0.19
CPSF3-201ENST00000238112 OR5L1Q8NGL2 311 aa16.24■□□□□ 0.19
CPSF3-201ENST00000238112 KCNE4Q8WWG9 221 aa16.24■□□□□ 0.19
CPSF3-201ENST00000238112 SYT3Q9BQG1 590 aa16.24■□□□□ 0.19
CPSF3-201ENST00000238112 PARP12Q9H0J9 701 aaKnown RBP16.24■□□□□ 0.19
CPSF3-201ENST00000238112 IGKV1-12A0A0C4DH73 117 aa16.24■□□□□ 0.19
CPSF3-201ENST00000238112 C9JQL5 133 aa16.24■□□□□ 0.19
CPSF3-201ENST00000238112 MASP2O00187 686 aa16.24■□□□□ 0.19
CPSF3-201ENST00000238112 IGKV1D-12P01611 117 aa16.24■□□□□ 0.19
CPSF3-201ENST00000238112 P04436 131 aa16.24■□□□□ 0.19
CPSF3-201ENST00000238112 CRYBA1P05813 215 aa16.24■□□□□ 0.19
CPSF3-201ENST00000238112 SRD5A2P31213 254 aa16.24■□□□□ 0.19
CPSF3-201ENST00000238112 LRTM2Q8N967 370 aa16.24■□□□□ 0.19
CPSF3-201ENST00000238112 GLYATL2Q8WU03 294 aa16.24■□□□□ 0.19
CPSF3-201ENST00000238112 AKR1E2Q96JD6 320 aa16.24■□□□□ 0.19
CPSF3-201ENST00000238112 TIMM10BQ9Y5J6 103 aa16.24■□□□□ 0.19
CPSF3-201ENST00000238112 CCDC85CA6NKD9 419 aa16.23■□□□□ 0.19
CPSF3-201ENST00000238112 GPR137BO60478 399 aa16.23■□□□□ 0.19
CPSF3-201ENST00000238112 DUSP1P28562 367 aa16.23■□□□□ 0.19
CPSF3-201ENST00000238112 NTF4P34130 210 aa16.23■□□□□ 0.19
CPSF3-201ENST00000238112 FOLR3P41439 243 aa16.23■□□□□ 0.19
CPSF3-201ENST00000238112 GLP1RP43220 463 aa16.23■□□□□ 0.19
CPSF3-201ENST00000238112 FUT6P51993 359 aa16.23■□□□□ 0.19
CPSF3-201ENST00000238112 B3GALT5-AS1P59052 145 aa16.23■□□□□ 0.19
CPSF3-201ENST00000238112 PSG4Q00888 419 aa16.23■□□□□ 0.19
CPSF3-201ENST00000238112 MALLQ13021 153 aa16.23■□□□□ 0.19
CPSF3-201ENST00000238112 LGI3Q8N145 548 aa16.23■□□□□ 0.19
CPSF3-201ENST00000238112 LYPD6BQ8NI32 183 aa16.23■□□□□ 0.19
CPSF3-201ENST00000238112 SGCZQ96LD1 299 aa16.23■□□□□ 0.19
CPSF3-201ENST00000238112 FOXB1Q99853 325 aa16.23■□□□□ 0.19
CPSF3-201ENST00000238112 RGCCQ9H4X1 137 aa16.23■□□□□ 0.19
CPSF3-201ENST00000238112 FBXO9Q9UK97 447 aaPredicted RBP16.23■□□□□ 0.19
CPSF3-201ENST00000238112 KPTNQ9Y664 436 aa16.23■□□□□ 0.19
CPSF3-201ENST00000238112 H7C1Q1 480 aa16.23■□□□□ 0.19
CPSF3-201ENST00000238112 XRCC2O43543 280 aa16.23■□□□□ 0.19
CPSF3-201ENST00000238112 CFIP05156 583 aa16.23■□□□□ 0.19
CPSF3-201ENST00000238112 GLI4P10075 376 aa16.23■□□□□ 0.19
CPSF3-201ENST00000238112 SPP1P10451 314 aa16.23■□□□□ 0.19
CPSF3-201ENST00000238112 TCN2P20062 427 aa16.23■□□□□ 0.19
CPSF3-201ENST00000238112 AKIRIN2Q53H80 203 aa16.23■□□□□ 0.19
CPSF3-201ENST00000238112 PLCXD3Q63HM9 321 aa16.23■□□□□ 0.19
CPSF3-201ENST00000238112 C18orf12Q96KH6 178 aa16.23■□□□□ 0.19
CPSF3-201ENST00000238112 SMCO4Q9NRQ5 59 aa16.23■□□□□ 0.19
CPSF3-201ENST00000238112 IL36GQ9NZH8 169 aa16.23■□□□□ 0.19
CPSF3-201ENST00000238112 PILRBQ9UKJ0 227 aa16.23■□□□□ 0.19
CPSF3-201ENST00000238112 CFAP54Q96N23 3096 aa16.22■□□□□ 0.19
CPSF3-201ENST00000238112 ZNF716A6NP11 495 aa16.22■□□□□ 0.19
CPSF3-201ENST00000238112 FAM157AC9JC47 383 aa16.22■□□□□ 0.19
CPSF3-201ENST00000238112 CXCL13O43927 109 aa16.22■□□□□ 0.19
CPSF3-201ENST00000238112 PDCD6O75340 191 aa16.22■□□□□ 0.19
CPSF3-201ENST00000238112 SEC11BP0C7V7 166 aa16.22■□□□□ 0.19
CPSF3-201ENST00000238112 PI4KAP42356 2102 aa16.22■□□□□ 0.19
CPSF3-201ENST00000238112 PPT1P50897 306 aa16.22■□□□□ 0.19
CPSF3-201ENST00000238112 PCBD1P61457 104 aa16.22■□□□□ 0.19
CPSF3-201ENST00000238112 HERV-K104P61576 105 aa16.22■□□□□ 0.19
CPSF3-201ENST00000238112 ZNF616Q08AN1 781 aa16.22■□□□□ 0.19
CPSF3-201ENST00000238112 HMGN3Q15651 99 aa16.22■□□□□ 0.19
CPSF3-201ENST00000238112 GPR157Q5UAW9 335 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms