RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 MOB3CQ70IA8 216 aa9.18□□□□□ -0.94
CDCA3-201ENST00000229265 MRPL21Q7Z2W9 205 aaKnown RBP9.18□□□□□ -0.94
CDCA3-201ENST00000229265 ZNF573Q86YE8 665 aa9.18□□□□□ -0.94
CDCA3-201ENST00000229265 OR5AP2Q8NGF4 316 aa9.18□□□□□ -0.94
CDCA3-201ENST00000229265 PHF3Q92576 2039 aaKnown RBP9.18□□□□□ -0.94
CDCA3-201ENST00000229265 GCDHQ92947 438 aaPredicted RBP9.18□□□□□ -0.94
CDCA3-201ENST00000229265 RIMS4Q9H426 269 aaPredicted RBP9.18□□□□□ -0.94
CDCA3-201ENST00000229265 DLL4Q9NR61 685 aa9.18□□□□□ -0.94
CDCA3-201ENST00000229265 DECR2Q9NUI1 292 aa9.18□□□□□ -0.94
CDCA3-201ENST00000229265 PLEKHJ1Q9NW61 149 aa9.18□□□□□ -0.94
CDCA3-201ENST00000229265 ZNF222Q9UK12 451 aa9.18□□□□□ -0.94
CDCA3-201ENST00000229265 ZNF469Q96JG9 3925 aaPredicted RBP9.17□□□□□ -0.94
CDCA3-201ENST00000229265 TMEM82A0PJX8 343 aa9.17□□□□□ -0.94
CDCA3-201ENST00000229265 PQLC2LA1A4F0 135 aa9.17□□□□□ -0.94
CDCA3-201ENST00000229265 C5orf63A6NC05 138 aa9.17□□□□□ -0.94
CDCA3-201ENST00000229265 MBD3L4A6NDZ8 208 aaPredicted RBP9.17□□□□□ -0.94
CDCA3-201ENST00000229265 MBD3L3A6NE82 208 aaPredicted RBP9.17□□□□□ -0.94
CDCA3-201ENST00000229265 MBD3L5A6NJ08 208 aaPredicted RBP9.17□□□□□ -0.94
CDCA3-201ENST00000229265 ANKRD30BLA7E2S9 258 aa9.17□□□□□ -0.94
CDCA3-201ENST00000229265 SSX5O60225 188 aa9.17□□□□□ -0.94
CDCA3-201ENST00000229265 HLA-HP01893 362 aa9.17□□□□□ -0.94
CDCA3-201ENST00000229265 OR4E1P0C645 316 aa9.17□□□□□ -0.94
CDCA3-201ENST00000229265 RAC2P15153 192 aa9.17□□□□□ -0.94
CDCA3-201ENST00000229265 COX5AP20674 150 aa9.17□□□□□ -0.94
CDCA3-201ENST00000229265 TIMP3P35625 211 aa9.17□□□□□ -0.94
CDCA3-201ENST00000229265 RAD52P43351 418 aa9.17□□□□□ -0.94
CDCA3-201ENST00000229265 OR3A3P47888 321 aa9.17□□□□□ -0.94
CDCA3-201ENST00000229265 DHODHQ02127 395 aa9.17□□□□□ -0.94
CDCA3-201ENST00000229265 HGFACQ04756 655 aa9.17□□□□□ -0.94
CDCA3-201ENST00000229265 IKZF1Q13422 519 aa9.17□□□□□ -0.94
CDCA3-201ENST00000229265 GABRA6Q16445 453 aa9.17□□□□□ -0.94
CDCA3-201ENST00000229265 MPV17LQ2QL34 196 aa9.17□□□□□ -0.94
CDCA3-201ENST00000229265 FAM76BQ5HYJ3 339 aa9.17□□□□□ -0.94
CDCA3-201ENST00000229265 SFRP5Q5T4F7 317 aa9.17□□□□□ -0.94
CDCA3-201ENST00000229265 DHRS11Q6UWP2 260 aa9.17□□□□□ -0.94
CDCA3-201ENST00000229265 SEM1Q6ZVN7 128 aa9.17□□□□□ -0.94
CDCA3-201ENST00000229265 C1QL2Q7Z5L3 287 aa9.17□□□□□ -0.94
CDCA3-201ENST00000229265 ZDHHC23Q8IYP9 409 aa9.17□□□□□ -0.94
CDCA3-201ENST00000229265 ASCC1Q8N9N2 400 aaKnown RBP9.17□□□□□ -0.94
CDCA3-201ENST00000229265 OR8S1Q8NH09 359 aa9.17□□□□□ -0.94
CDCA3-201ENST00000229265 OR51F2Q8NH61 342 aa9.17□□□□□ -0.94
CDCA3-201ENST00000229265 MBD3L2Q8NHZ7 208 aaPredicted RBP9.17□□□□□ -0.94
CDCA3-201ENST00000229265 PIGCQ92535 297 aa9.17□□□□□ -0.94
CDCA3-201ENST00000229265 ARHGAP5-AS1Q96IT6 56 aa9.17□□□□□ -0.94
CDCA3-201ENST00000229265 FAM210AQ96ND0 272 aa9.17□□□□□ -0.94
CDCA3-201ENST00000229265 TRIB1Q96RU8 372 aa9.17□□□□□ -0.94
CDCA3-201ENST00000229265 SLC6A7Q99884 636 aa9.17□□□□□ -0.94
CDCA3-201ENST00000229265 PKIBQ9C010 78 aa9.17□□□□□ -0.94
CDCA3-201ENST00000229265 SPACA1Q9HBV2 294 aa9.17□□□□□ -0.94
CDCA3-201ENST00000229265 GPR173Q9NS66 373 aa9.17□□□□□ -0.94
CDCA3-201ENST00000229265 GPR132Q9UNW8 380 aa9.17□□□□□ -0.94
CDCA3-201ENST00000229265 FLVCR2Q9UPI3 526 aa9.17□□□□□ -0.94
CDCA3-201ENST00000229265 STARD10Q9Y365 291 aa9.17□□□□□ -0.94
CDCA3-201ENST00000229265 A0A096LPE4 126 aa9.16□□□□□ -0.94
CDCA3-201ENST00000229265 A0A0A6YYD4 124 aa9.16□□□□□ -0.94
CDCA3-201ENST00000229265 FAM230AA0A1W2PPH8 454 aa9.16□□□□□ -0.94
CDCA3-201ENST00000229265 A0A1W2PPZ6 126 aa9.16□□□□□ -0.94
CDCA3-201ENST00000229265 CD300LBA8K4G0 201 aa9.16□□□□□ -0.94
CDCA3-201ENST00000229265 HTR3BO95264 441 aa9.16□□□□□ -0.94
CDCA3-201ENST00000229265 IL2RAP01589 272 aa9.16□□□□□ -0.94
CDCA3-201ENST00000229265 IGHV3-9P01782 118 aa9.16□□□□□ -0.94
CDCA3-201ENST00000229265 RLN1P04808 185 aa9.16□□□□□ -0.94
CDCA3-201ENST00000229265 ZNF14P17017 642 aaPredicted RBP9.16□□□□□ -0.94
CDCA3-201ENST00000229265 FUT3P21217 361 aa9.16□□□□□ -0.94
CDCA3-201ENST00000229265 CALCRP30988 508 aa9.16□□□□□ -0.94
CDCA3-201ENST00000229265 KIR2DL2P43627 348 aaPredicted RBP9.16□□□□□ -0.94
CDCA3-201ENST00000229265 CYCSP99999 105 aaKnown RBP9.16□□□□□ -0.94
CDCA3-201ENST00000229265 SNTB1Q13884 538 aaKnown RBP9.16□□□□□ -0.94
CDCA3-201ENST00000229265 TMEM128Q5BJH2 165 aa9.16□□□□□ -0.94
CDCA3-201ENST00000229265 PLCXD3Q63HM9 321 aa9.16□□□□□ -0.94
CDCA3-201ENST00000229265 SP5Q6BEB4 398 aaPredicted RBP9.16□□□□□ -0.94
CDCA3-201ENST00000229265 LIN54Q6MZP7 749 aa9.16□□□□□ -0.94
CDCA3-201ENST00000229265 ZNF767PQ75MW2 155 aa9.16□□□□□ -0.94
CDCA3-201ENST00000229265 OVCH2Q7RTZ1 564 aa9.16□□□□□ -0.94
CDCA3-201ENST00000229265 MRGPRGQ86SM5 289 aa9.16□□□□□ -0.94
CDCA3-201ENST00000229265 LHFPL1Q86WI0 220 aa9.16□□□□□ -0.94
CDCA3-201ENST00000229265 Q8IYB0 196 aa9.16□□□□□ -0.94
CDCA3-201ENST00000229265 C12orf45Q8N5I9 185 aaPredicted RBP9.16□□□□□ -0.94
CDCA3-201ENST00000229265 SPERTQ8NA61 448 aa9.16□□□□□ -0.94
CDCA3-201ENST00000229265 UXS1Q8NBZ7 420 aa9.16□□□□□ -0.94
CDCA3-201ENST00000229265 SLC30A7Q8NEW0 376 aa9.16□□□□□ -0.94
CDCA3-201ENST00000229265 BEST4Q8NFU0 473 aa9.16□□□□□ -0.94
CDCA3-201ENST00000229265 OR2AK2Q8NG84 335 aa9.16□□□□□ -0.94
CDCA3-201ENST00000229265 OR13C8Q8NGS7 320 aa9.16□□□□□ -0.94
CDCA3-201ENST00000229265 OR2AE1Q8NHA4 323 aa9.16□□□□□ -0.94
CDCA3-201ENST00000229265 FBXW5Q969U6 566 aa9.16□□□□□ -0.94
CDCA3-201ENST00000229265 DACT3Q96B18 629 aaPredicted RBP9.16□□□□□ -0.94
CDCA3-201ENST00000229265 SPACA5Q96QH8 159 aa9.16□□□□□ -0.94
CDCA3-201ENST00000229265 TINAGL1Q9GZM7 467 aaPredicted RBP9.16□□□□□ -0.94
CDCA3-201ENST00000229265 BANF2Q9H503 90 aa9.16□□□□□ -0.94
CDCA3-201ENST00000229265 MYEF2Q9P2K5 600 aaKnown RBP9.16□□□□□ -0.94
CDCA3-201ENST00000229265 PRSS50Q9UI38 385 aa9.16□□□□□ -0.94
CDCA3-201ENST00000229265 MEMO1Q9Y316 297 aa9.16□□□□□ -0.94
CDCA3-201ENST00000229265 FAM215AQ9Y5M1 114 aa9.16□□□□□ -0.94
CDCA3-201ENST00000229265 ARHGAP21Q5T5U3 1957 aa9.15□□□□□ -0.94
CDCA3-201ENST00000229265 TEP1Q99973 2627 aaKnown RBP9.15□□□□□ -0.94
CDCA3-201ENST00000229265 PIGBOS1A0A0B4J2F0 54 aa9.15□□□□□ -0.94
CDCA3-201ENST00000229265 FIGNL2A6NMB9 653 aa9.15□□□□□ -0.94
CDCA3-201ENST00000229265 DUS4LO95620 317 aaKnown RBP9.15□□□□□ -0.94
CDCA3-201ENST00000229265 IGKV3-15P01624 115 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms