RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 TMED6Q8WW62 240 aa21.64■■□□□ 1.05
RUNDC3A-201ENST00000225441 UCN2Q96RP3 112 aa21.64■■□□□ 1.05
RUNDC3A-201ENST00000225441 SEC11CQ9BY50 192 aa21.64■■□□□ 1.05
RUNDC3A-201ENST00000225441 ZNF701Q9NV72 531 aaPredicted RBP21.64■■□□□ 1.05
RUNDC3A-201ENST00000225441 CST4P01036 141 aa21.63■■□□□ 1.05
RUNDC3A-201ENST00000225441 PTGER4P35408 488 aa21.63■■□□□ 1.05
RUNDC3A-201ENST00000225441 TMEM42Q69YG0 159 aa21.63■■□□□ 1.05
RUNDC3A-201ENST00000225441 PIGTQ969N2 578 aa21.63■■□□□ 1.05
RUNDC3A-201ENST00000225441 ZNF2Q9BSG1 426 aaPredicted RBP21.63■■□□□ 1.05
RUNDC3A-201ENST00000225441 NECAP2Q9NVZ3 263 aa21.63■■□□□ 1.05
RUNDC3A-201ENST00000225441 KCNIP3Q9Y2W7 256 aa21.63■■□□□ 1.05
RUNDC3A-201ENST00000225441 MRPS18CQ9Y3D5 142 aaKnown RBP21.63■■□□□ 1.05
RUNDC3A-201ENST00000225441 MSGN1A6NI15 193 aa21.62■■□□□ 1.05
RUNDC3A-201ENST00000225441 KLK10O43240 276 aa21.62■■□□□ 1.05
RUNDC3A-201ENST00000225441 RSU1Q15404 277 aa21.62■■□□□ 1.05
RUNDC3A-201ENST00000225441 ROBO4Q8WZ75 1007 aa21.62■■□□□ 1.05
RUNDC3A-201ENST00000225441 PLEKHA2Q9HB19 425 aa21.62■■□□□ 1.05
RUNDC3A-201ENST00000225441 TMEM38BQ9NVV0 291 aa21.62■■□□□ 1.05
RUNDC3A-201ENST00000225441 MCTS1Q9ULC4 181 aaKnown RBP21.62■■□□□ 1.05
RUNDC3A-201ENST00000225441 NEURL1O76050 574 aa21.62■■□□□ 1.05
RUNDC3A-201ENST00000225441 SNAPINO95295 136 aa21.62■■□□□ 1.05
RUNDC3A-201ENST00000225441 PCBD1P61457 104 aa21.62■■□□□ 1.05
RUNDC3A-201ENST00000225441 RIPPLY2Q5TAB7 128 aa21.62■■□□□ 1.05
RUNDC3A-201ENST00000225441 C6orf201Q7Z4U5 140 aa21.62■■□□□ 1.05
RUNDC3A-201ENST00000225441 REEP6Q96HR9 211 aa21.62■■□□□ 1.05
RUNDC3A-201ENST00000225441 NCOA6Q14686 2063 aaPredicted RBP21.61■■□□□ 1.05
RUNDC3A-201ENST00000225441 A0A0G2JMM0 328 aa21.61■■□□□ 1.05
RUNDC3A-201ENST00000225441 A0A1W2PPB8 328 aa21.61■■□□□ 1.05
RUNDC3A-201ENST00000225441 A0A1W2PRS3 328 aa21.61■■□□□ 1.05
RUNDC3A-201ENST00000225441 OR6C6A6NF89 314 aa21.61■■□□□ 1.05
RUNDC3A-201ENST00000225441 ZNF705EA8MWA4 302 aaPredicted RBP21.61■■□□□ 1.05
RUNDC3A-201ENST00000225441 KIR3DP1A8MWS1 328 aa21.61■■□□□ 1.05
RUNDC3A-201ENST00000225441 JTBO76095 146 aa21.61■■□□□ 1.05
RUNDC3A-201ENST00000225441 HKR1P10072 659 aa21.61■■□□□ 1.05
RUNDC3A-201ENST00000225441 B3GALT5-AS1P59052 145 aa21.61■■□□□ 1.05
RUNDC3A-201ENST00000225441 IAH1Q2TAA2 248 aaPredicted RBP21.61■■□□□ 1.05
RUNDC3A-201ENST00000225441 MST1LQ2TV78 715 aa21.61■■□□□ 1.05
RUNDC3A-201ENST00000225441 SPINK14Q6IE38 97 aa21.61■■□□□ 1.05
RUNDC3A-201ENST00000225441 GALNT14Q96FL9 552 aa21.61■■□□□ 1.05
RUNDC3A-201ENST00000225441 SIGLEC12Q96PQ1 595 aa21.61■■□□□ 1.05
RUNDC3A-201ENST00000225441 PLA2G3Q9NZ20 509 aa21.61■■□□□ 1.05
RUNDC3A-201ENST00000225441 AKAP13Q12802 2813 aa21.61■■□□□ 1.05
RUNDC3A-201ENST00000225441 IGHV3-15A0A0B4J1V0 119 aa21.6■■□□□ 1.05
RUNDC3A-201ENST00000225441 TNFSF11O14788 317 aa21.6■■□□□ 1.05
RUNDC3A-201ENST00000225441 NUPL2O15504 423 aaKnown RBP21.6■■□□□ 1.05
RUNDC3A-201ENST00000225441 ACTL6AO96019 429 aa21.6■■□□□ 1.05
RUNDC3A-201ENST00000225441 HOXB5P09067 269 aa21.6■■□□□ 1.05
RUNDC3A-201ENST00000225441 RBP2P50120 134 aa21.6■■□□□ 1.05
RUNDC3A-201ENST00000225441 OR1C1Q15619 314 aa21.6■■□□□ 1.05
RUNDC3A-201ENST00000225441 SNAI3Q3KNW1 292 aa21.6■■□□□ 1.05
RUNDC3A-201ENST00000225441 TMEM200AQ86VY9 491 aa21.6■■□□□ 1.05
RUNDC3A-201ENST00000225441 LRTM2Q8N967 370 aa21.6■■□□□ 1.05
RUNDC3A-201ENST00000225441 SNIP1Q8TAD8 396 aaKnown RBP21.6■■□□□ 1.05
RUNDC3A-201ENST00000225441 JSRP1Q96MG2 331 aaPredicted RBP21.6■■□□□ 1.05
RUNDC3A-201ENST00000225441 GPR173Q9NS66 373 aa21.6■■□□□ 1.05
RUNDC3A-201ENST00000225441 FREM2Q5SZK8 3169 aa21.6■■□□□ 1.05
RUNDC3A-201ENST00000225441 FAM74A7A6NL05 159 aa21.59■■□□□ 1.05
RUNDC3A-201ENST00000225441 KCNAB3O43448 404 aa21.59■■□□□ 1.05
RUNDC3A-201ENST00000225441 DEDDO75618 318 aa21.59■■□□□ 1.05
RUNDC3A-201ENST00000225441 KNG1P01042 644 aa21.59■■□□□ 1.05
RUNDC3A-201ENST00000225441 DBHP09172 617 aa21.59■■□□□ 1.05
RUNDC3A-201ENST00000225441 OR5H8P0DN80 308 aa21.59■■□□□ 1.05
RUNDC3A-201ENST00000225441 ZNF708P17019 499 aa21.59■■□□□ 1.05
RUNDC3A-201ENST00000225441 GABRR1P24046 479 aa21.59■■□□□ 1.05
RUNDC3A-201ENST00000225441 SULT1A2P50226 295 aa21.59■■□□□ 1.05
RUNDC3A-201ENST00000225441 CAV2P51636 162 aa21.59■■□□□ 1.05
RUNDC3A-201ENST00000225441 DEFB109BQ30KR1 87 aa21.59■■□□□ 1.05
RUNDC3A-201ENST00000225441 FAM74A3Q4VXF1 159 aa21.59■■□□□ 1.05
RUNDC3A-201ENST00000225441 DHRS7BQ6IAN0 325 aaPredicted RBP21.59■■□□□ 1.05
RUNDC3A-201ENST00000225441 SUCNR1Q9BXA5 334 aa21.59■■□□□ 1.05
RUNDC3A-201ENST00000225441 SRXN1Q9BYN0 137 aa21.59■■□□□ 1.05
RUNDC3A-201ENST00000225441 ZNF552Q9H707 407 aaPredicted RBP21.59■■□□□ 1.05
RUNDC3A-201ENST00000225441 TAF9BQ9HBM6 251 aa21.59■■□□□ 1.05
RUNDC3A-201ENST00000225441 GSKIPQ9P0R6 139 aa21.59■■□□□ 1.05
RUNDC3A-201ENST00000225441 TIMM10BQ9Y5J6 103 aa21.59■■□□□ 1.05
RUNDC3A-201ENST00000225441 EML6Q6ZMW3 1958 aa21.59■■□□□ 1.05
RUNDC3A-201ENST00000225441 MED13Q9UHV7 2174 aa21.59■■□□□ 1.05
RUNDC3A-201ENST00000225441 F8W036 122 aa21.59■■□□□ 1.05
RUNDC3A-201ENST00000225441 CCL11P51671 97 aa21.59■■□□□ 1.05
RUNDC3A-201ENST00000225441 UCP3P55916 312 aa21.59■■□□□ 1.05
RUNDC3A-201ENST00000225441 S100A10P60903 97 aa21.59■■□□□ 1.05
RUNDC3A-201ENST00000225441 PUSL1Q8N0Z8 303 aaKnown RBP21.59■■□□□ 1.05
RUNDC3A-201ENST00000225441 BCO1Q9HAY6 547 aa21.59■■□□□ 1.05
RUNDC3A-201ENST00000225441 DEPPQ9NTK1 212 aa21.59■■□□□ 1.05
RUNDC3A-201ENST00000225441 K7EPK0 472 aa21.58■■□□□ 1.05
RUNDC3A-201ENST00000225441 SFTPBP07988 381 aa21.58■■□□□ 1.05
RUNDC3A-201ENST00000225441 CHATP28329 748 aa21.58■■□□□ 1.05
RUNDC3A-201ENST00000225441 RPL12P30050 165 aaKnown RBP21.58■■□□□ 1.05
RUNDC3A-201ENST00000225441 CARD18P57730 90 aa21.58■■□□□ 1.05
RUNDC3A-201ENST00000225441 OR8B8Q15620 311 aa21.58■■□□□ 1.05
RUNDC3A-201ENST00000225441 NRN1LQ496H8 165 aa21.58■■□□□ 1.05
RUNDC3A-201ENST00000225441 FAM71E2Q8N5Q1 922 aa21.58■■□□□ 1.05
RUNDC3A-201ENST00000225441 OR51F2Q8NH61 342 aa21.58■■□□□ 1.05
RUNDC3A-201ENST00000225441 BORCS8Q96FH0 119 aa21.58■■□□□ 1.05
RUNDC3A-201ENST00000225441 CMSS1Q9BQ75 279 aaKnown RBP21.58■■□□□ 1.05
RUNDC3A-201ENST00000225441 PARP11Q9NR21 331 aa21.58■■□□□ 1.05
RUNDC3A-201ENST00000225441 UQCC1Q9NVA1 299 aa21.58■■□□□ 1.05
RUNDC3A-201ENST00000225441 IGKV1D-8A0A087WSZ0 117 aa21.57■■□□□ 1.04
RUNDC3A-201ENST00000225441 PLATP00750 562 aa21.57■■□□□ 1.04
RUNDC3A-201ENST00000225441 ACKR3P25106 362 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms