RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 TMED3Q9Y3Q3 217 aa9.95□□□□□ -0.82
USP31-201ENST00000219689 TMEM184BQ9Y519 407 aaPredicted RBP9.95□□□□□ -0.82
USP31-201ENST00000219689 TIMM8AO60220 97 aaPredicted RBP9.94□□□□□ -0.82
USP31-201ENST00000219689 RGRP47804 291 aa9.94□□□□□ -0.82
USP31-201ENST00000219689 RBM11P57052 281 aaKnown RBP9.94□□□□□ -0.82
USP31-201ENST00000219689 HHEXQ03014 270 aa9.94□□□□□ -0.82
USP31-201ENST00000219689 MYBPHQ13203 477 aa9.94□□□□□ -0.82
USP31-201ENST00000219689 SRSF9Q13242 221 aaKnown RBP eCLIP9.94□□□□□ -0.82
USP31-201ENST00000219689 OR4B1Q8NGF8 309 aa9.94□□□□□ -0.82
USP31-201ENST00000219689 LPAR4Q99677 370 aa9.94□□□□□ -0.82
USP31-201ENST00000219689 STRADBQ9C0K7 418 aa9.94□□□□□ -0.82
USP31-201ENST00000219689 MPTX1A8MV57 137 aa9.94□□□□□ -0.82
USP31-201ENST00000219689 TCTN3Q6NUS6 607 aa9.94□□□□□ -0.82
USP31-201ENST00000219689 LRP10Q7Z4F1 713 aa9.94□□□□□ -0.82
USP31-201ENST00000219689 BHLHE23Q8NDY6 225 aa9.94□□□□□ -0.82
USP31-201ENST00000219689 PCGF1Q9BSM1 259 aa9.94□□□□□ -0.82
USP31-201ENST00000219689 SLC45A2Q9UMX9 530 aa9.94□□□□□ -0.82
USP31-201ENST00000219689 CLDN16Q9Y5I7 305 aa9.94□□□□□ -0.82
USP31-201ENST00000219689 GP1BAP07359 652 aa9.94□□□□□ -0.82
USP31-201ENST00000219689 GRPP07492 148 aa9.94□□□□□ -0.82
USP31-201ENST00000219689 PYCR3Q53H96 274 aa9.94□□□□□ -0.82
USP31-201ENST00000219689 MUC15Q8N387 334 aa9.94□□□□□ -0.82
USP31-201ENST00000219689 ARHGAP5-AS1Q96IT6 56 aa9.94□□□□□ -0.82
USP31-201ENST00000219689 ZDHHC8Q9ULC8 765 aa9.94□□□□□ -0.82
USP31-201ENST00000219689 ADAMTS5Q9UNA0 930 aa9.94□□□□□ -0.82
USP31-201ENST00000219689 ZNF256Q9Y2P7 627 aaPredicted RBP9.94□□□□□ -0.82
USP31-201ENST00000219689 TMED7-TICAM2A0A0A6YYA0 188 aa9.94□□□□□ -0.82
USP31-201ENST00000219689 VAMP5O95183 116 aa9.94□□□□□ -0.82
USP31-201ENST00000219689 IL3RAP26951 378 aa9.94□□□□□ -0.82
USP31-201ENST00000219689 P2RY4P51582 365 aa9.94□□□□□ -0.82
USP31-201ENST00000219689 PIK3IP1Q96FE7 263 aa9.94□□□□□ -0.82
USP31-201ENST00000219689 ASIC5Q9NY37 505 aa9.94□□□□□ -0.82
USP31-201ENST00000219689 TMED7Q9Y3B3 224 aa9.94□□□□□ -0.82
USP31-201ENST00000219689 HBQ1P09105 142 aa9.94□□□□□ -0.82
USP31-201ENST00000219689 PRAMEF20Q5VT98 475 aa9.94□□□□□ -0.82
USP31-201ENST00000219689 D2HGDHQ8N465 521 aa9.94□□□□□ -0.82
USP31-201ENST00000219689 MOGAT1Q96PD6 335 aa9.94□□□□□ -0.82
USP31-201ENST00000219689 TLNRD1Q9H1K6 362 aa9.94□□□□□ -0.82
USP31-201ENST00000219689 PRSS1P07477 247 aa9.94□□□□□ -0.82
USP31-201ENST00000219689 ID4P47928 161 aa9.94□□□□□ -0.82
USP31-201ENST00000219689 SLC16A11Q8NCK7 471 aa9.94□□□□□ -0.82
USP31-201ENST00000219689 NUDT10Q8NFP7 164 aa9.94□□□□□ -0.82
USP31-201ENST00000219689 WDR61Q9GZS3 305 aaKnown RBP9.94□□□□□ -0.82
USP31-201ENST00000219689 FTSJ1Q9UET6 329 aa9.94□□□□□ -0.82
USP31-201ENST00000219689 TCRBV21S2A2A0A5A6 115 aa9.94□□□□□ -0.82
USP31-201ENST00000219689 ZBTB42B2RXF5 422 aa9.94□□□□□ -0.82
USP31-201ENST00000219689 DNAJC4Q9NNZ3 241 aa9.94□□□□□ -0.82
USP31-201ENST00000219689 GPR75O95800 540 aa9.94□□□□□ -0.82
USP31-201ENST00000219689 PAFAH1B2P68402 229 aa9.94□□□□□ -0.82
USP31-201ENST00000219689 PARP11Q9NR21 331 aa9.94□□□□□ -0.82
USP31-201ENST00000219689 TREM2Q9NZC2 230 aa9.94□□□□□ -0.82
USP31-201ENST00000219689 A0A0J9YY10 115 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 C1SP09871 688 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 FAM3BP58499 235 aaPredicted RBP9.93□□□□□ -0.82
USP31-201ENST00000219689 ZNF660Q6AZW8 331 aaPredicted RBP9.93□□□□□ -0.82
USP31-201ENST00000219689 SRPK3Q9UPE1 567 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 SLC39A5Q6ZMH5 540 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 PLXDC1Q8IUK5 500 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 OR10X1Q8NGY0 326 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 RNF2Q99496 336 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 ZFP64Q9NPA5 681 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 CTXN2P0C2S0 81 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 CYBAP13498 195 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 FAM71E1Q6IPT2 247 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 TRAT1Q6PIZ9 186 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 NUDT11Q96G61 164 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 OBSL1O75147 1896 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 MBPP02686 304 aaPredicted RBP9.93□□□□□ -0.82
USP31-201ENST00000219689 SLC35B1P78383 322 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 DCAF12L2Q5VW00 463 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 SLAMF6Q96DU3 332 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 PBOV1Q9GZY1 135 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 C4orf47A7E2U8 309 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 IDSB3KWA1 339 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 TEX30Q5JUR7 227 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 ZNF343Q6P1L6 599 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 CALHM3Q86XJ0 350 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 TCEAL8Q8IYN2 117 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 OR6C1Q96RD1 312 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 NEU3Q9UQ49 428 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 PLPP2O43688 288 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 TSPAN13O95857 204 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 OR2C3Q8N628 320 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 SFXN1Q9H9B4 322 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 CRHP06850 196 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 ADAMTS17Q8TE56 1095 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 EMC6Q9BV81 110 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 PMS2P1A4D2B8 440 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 CSNK1G2P78368 415 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 C1orf61Q13536 156 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 AGERQ15109 404 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 EOGTQ5NDL2 527 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 LHFPL2Q6ZUX7 228 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 GLRX5Q86SX6 157 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 OR10G4Q8NGN3 311 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 OR10G9Q8NGN4 311 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 OR10G7Q8NGN6 311 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 NAA60Q9H7X0 242 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 SPHK2Q9NRA0 654 aa9.93□□□□□ -0.82
USP31-201ENST00000219689 TIMM9Q9Y5J7 89 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms