RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 A0A1W2PQL4 384 aaPredicted RBP12.82□□□□□ -0.36
ERCC1-201ENST00000013807 A6NIN4 97 aa12.82□□□□□ -0.36
ERCC1-201ENST00000013807 METTL15A6NJ78 407 aa12.82□□□□□ -0.36
ERCC1-201ENST00000013807 F8VVB4 439 aa12.82□□□□□ -0.36
ERCC1-201ENST00000013807 F8VWA3 439 aa12.82□□□□□ -0.36
ERCC1-201ENST00000013807 M0R129 80 aa12.82□□□□□ -0.36
ERCC1-201ENST00000013807 IGHV1-8P0DP01 117 aa12.82□□□□□ -0.36
ERCC1-201ENST00000013807 FASP25445 335 aa12.82□□□□□ -0.36
ERCC1-201ENST00000013807 PAX6P26367 422 aa12.82□□□□□ -0.36
ERCC1-201ENST00000013807 BNIP1Q12981 228 aa12.82□□□□□ -0.36
ERCC1-201ENST00000013807 BEAN1Q3B7T3 259 aa12.82□□□□□ -0.36
ERCC1-201ENST00000013807 LDLRAD2Q5SZI1 272 aa12.82□□□□□ -0.36
ERCC1-201ENST00000013807 CCBE1Q6UXH8 406 aaPredicted RBP12.82□□□□□ -0.36
ERCC1-201ENST00000013807 KLHDC1Q8N7A1 406 aa12.82□□□□□ -0.36
ERCC1-201ENST00000013807 YIPF7Q8N8F6 280 aa12.82□□□□□ -0.36
ERCC1-201ENST00000013807 DNAAF1Q8NEP3 725 aa12.82□□□□□ -0.36
ERCC1-201ENST00000013807 RNF166Q96A37 237 aaPredicted RBP12.82□□□□□ -0.36
ERCC1-201ENST00000013807 ZNF702PQ9H963 129 aa12.82□□□□□ -0.36
ERCC1-201ENST00000013807 FOXJ3Q9UPW0 622 aa12.82□□□□□ -0.36
ERCC1-201ENST00000013807 A6NDX4 124 aa12.81□□□□□ -0.36
ERCC1-201ENST00000013807 SYT7O43581 403 aa12.81□□□□□ -0.36
ERCC1-201ENST00000013807 GATBO75879 557 aaKnown RBP12.81□□□□□ -0.36
ERCC1-201ENST00000013807 COX7A1P24310 79 aa12.81□□□□□ -0.36
ERCC1-201ENST00000013807 ZNF146Q15072 292 aa12.81□□□□□ -0.36
ERCC1-201ENST00000013807 SAMD5Q5TGI4 173 aa12.81□□□□□ -0.36
ERCC1-201ENST00000013807 ZNF782Q6ZMW2 699 aaPredicted RBP12.81□□□□□ -0.36
ERCC1-201ENST00000013807 GDPD3Q7L5L3 318 aa12.81□□□□□ -0.36
ERCC1-201ENST00000013807 TCF23Q7RTU1 214 aa12.81□□□□□ -0.36
ERCC1-201ENST00000013807 Q8IYB0 196 aa12.81□□□□□ -0.36
ERCC1-201ENST00000013807 OR8J1Q8NGP2 316 aa12.81□□□□□ -0.36
ERCC1-201ENST00000013807 PP6455Q8WZ26 134 aa12.81□□□□□ -0.36
ERCC1-201ENST00000013807 CIB1Q99828 191 aa12.81□□□□□ -0.36
ERCC1-201ENST00000013807 OSBPL10Q9BXB5 764 aa12.81□□□□□ -0.36
ERCC1-201ENST00000013807 GABARAPL3Q9BY60 117 aa12.81□□□□□ -0.36
ERCC1-201ENST00000013807 PITPNC1Q9UKF7 332 aa12.81□□□□□ -0.36
ERCC1-201ENST00000013807 AP4S1Q9Y587 144 aa12.81□□□□□ -0.36
ERCC1-201ENST00000013807 FAM230AA0A1W2PPH8 454 aa12.8□□□□□ -0.36
ERCC1-201ENST00000013807 TMEM82A0PJX8 343 aa12.8□□□□□ -0.36
ERCC1-201ENST00000013807 RPP14O95059 124 aaKnown RBP12.8□□□□□ -0.36
ERCC1-201ENST00000013807 SERPINA3P01011 423 aa12.8□□□□□ -0.36
ERCC1-201ENST00000013807 FCGR1AP12314 374 aa12.8□□□□□ -0.36
ERCC1-201ENST00000013807 MINOS1Q5TGZ0 78 aa12.8□□□□□ -0.36
ERCC1-201ENST00000013807 C1QL4Q86Z23 238 aa12.8□□□□□ -0.36
ERCC1-201ENST00000013807 ENTHD1Q8IYW4 607 aa12.8□□□□□ -0.36
ERCC1-201ENST00000013807 PRSS35Q8N3Z0 413 aa12.8□□□□□ -0.36
ERCC1-201ENST00000013807 ASCC1Q8N9N2 400 aaKnown RBP12.8□□□□□ -0.36
ERCC1-201ENST00000013807 RPS4Y2Q8TD47 263 aa12.8□□□□□ -0.36
ERCC1-201ENST00000013807 ZNF714Q96N38 554 aa12.8□□□□□ -0.36
ERCC1-201ENST00000013807 WNT10AQ9GZT5 417 aa12.8□□□□□ -0.36
ERCC1-201ENST00000013807 PLEKHA1Q9HB21 404 aa12.8□□□□□ -0.36
ERCC1-201ENST00000013807 LINC00312Q9Y6C7 94 aa12.8□□□□□ -0.36
ERCC1-201ENST00000013807 MINOS1-NBL1R4GNA1 71 aa12.8□□□□□ -0.36
ERCC1-201ENST00000013807 hADV38S2A0JD32 116 aa12.79□□□□□ -0.36
ERCC1-201ENST00000013807 FAM90A22PA8MWA6 464 aa12.79□□□□□ -0.36
ERCC1-201ENST00000013807 ARG1P05089 322 aa12.79□□□□□ -0.36
ERCC1-201ENST00000013807 ISG15P05161 165 aa12.79□□□□□ -0.36
ERCC1-201ENST00000013807 UBCP0CG48 685 aaKnown RBP12.79□□□□□ -0.36
ERCC1-201ENST00000013807 PIPP12273 146 aaPredicted RBP12.79□□□□□ -0.36
ERCC1-201ENST00000013807 ERP29P30040 261 aaKnown RBP12.79□□□□□ -0.36
ERCC1-201ENST00000013807 POLR2IP36954 125 aaKnown RBP12.79□□□□□ -0.36
ERCC1-201ENST00000013807 RAB13P51153 203 aa12.79□□□□□ -0.36
ERCC1-201ENST00000013807 EMX1Q04741 257 aaPredicted RBP12.79□□□□□ -0.36
ERCC1-201ENST00000013807 CNN3Q15417 329 aaKnown RBP12.79□□□□□ -0.36
ERCC1-201ENST00000013807 SSX2Q16385 188 aa12.79□□□□□ -0.36
ERCC1-201ENST00000013807 FBLN7Q53RD9 439 aa12.79□□□□□ -0.36
ERCC1-201ENST00000013807 SLC25A30Q5SVS4 291 aa12.79□□□□□ -0.36
ERCC1-201ENST00000013807 FDX2Q6P4F2 183 aa12.79□□□□□ -0.36
ERCC1-201ENST00000013807 SLC25A26Q70HW3 274 aa12.79□□□□□ -0.36
ERCC1-201ENST00000013807 UTS2BQ765I0 119 aa12.79□□□□□ -0.36
ERCC1-201ENST00000013807 EGFL6Q8IUX8 553 aa12.79□□□□□ -0.36
ERCC1-201ENST00000013807 BATF2Q8N1L9 274 aa12.79□□□□□ -0.36
ERCC1-201ENST00000013807 OR52N4Q8NGI2 321 aa12.79□□□□□ -0.36
ERCC1-201ENST00000013807 TRMT10AQ8TBZ6 339 aaKnown RBP12.79□□□□□ -0.36
ERCC1-201ENST00000013807 TRUB1Q8WWH5 349 aaKnown RBP12.79□□□□□ -0.36
ERCC1-201ENST00000013807 RFKQ969G6 155 aa12.79□□□□□ -0.36
ERCC1-201ENST00000013807 BORCS8Q96FH0 119 aa12.79□□□□□ -0.36
ERCC1-201ENST00000013807 IGKV1-9A0A0C4DH69 117 aa12.78□□□□□ -0.36
ERCC1-201ENST00000013807 TRBV2A0A0J9YWF9 115 aa12.78□□□□□ -0.36
ERCC1-201ENST00000013807 G3V4G9 280 aa12.78□□□□□ -0.36
ERCC1-201ENST00000013807 J3QRE1 110 aa12.78□□□□□ -0.36
ERCC1-201ENST00000013807 DYNC1I1O14576 645 aa12.78□□□□□ -0.36
ERCC1-201ENST00000013807 PEX2P28328 305 aa12.78□□□□□ -0.36
ERCC1-201ENST00000013807 RBP2P50120 134 aa12.78□□□□□ -0.36
ERCC1-201ENST00000013807 RASSF2P50749 326 aa12.78□□□□□ -0.36
ERCC1-201ENST00000013807 EDDM3BP56851 147 aa12.78□□□□□ -0.36
ERCC1-201ENST00000013807 ZNF91Q05481 1191 aa12.78□□□□□ -0.36
ERCC1-201ENST00000013807 SPIN3Q5JUX0 258 aa12.78□□□□□ -0.36
ERCC1-201ENST00000013807 KCTD20Q7Z5Y7 419 aa12.78□□□□□ -0.36
ERCC1-201ENST00000013807 AMIGO2Q86SJ2 522 aa12.78□□□□□ -0.36
ERCC1-201ENST00000013807 SLAMF9Q96A28 289 aa12.78□□□□□ -0.36
ERCC1-201ENST00000013807 EME1Q96AY2 570 aa12.78□□□□□ -0.36
ERCC1-201ENST00000013807 CENPNQ96H22 339 aaPredicted RBP12.78□□□□□ -0.36
ERCC1-201ENST00000013807 TBX5Q99593 518 aa12.78□□□□□ -0.36
ERCC1-201ENST00000013807 ADI1Q9BV57 179 aa12.78□□□□□ -0.36
ERCC1-201ENST00000013807 PRSS22Q9GZN4 317 aa12.78□□□□□ -0.36
ERCC1-201ENST00000013807 ADARB2-AS1A8MUL3 147 aa12.77□□□□□ -0.37
ERCC1-201ENST00000013807 PSPNO60542 156 aa12.77□□□□□ -0.37
ERCC1-201ENST00000013807 HAND1O96004 215 aa12.77□□□□□ -0.37
ERCC1-201ENST00000013807 VSIG10L2P0DP72 767 aa12.77□□□□□ -0.37
ERCC1-201ENST00000013807 LMO1P25800 156 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms