RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Olfr493Q8VEW5 314 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 Olfr494Q8VG07 314 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 Olfr202Q8VGQ3 307 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 Tmem246Q91YV9 403 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 WacQ924H7 646 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 3100002H09RikQ9CXW6 140 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 TsfmQ9CZR8 324 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 Ints12Q9D168 461 aa7.59□□□□□ -1.19
Trim39-201ENSMUST00000042717 Ndufaf5A2APY7 343 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Mfsd4b5E9PYY6 479 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Dpm1O70152 260 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Fosl2P47930 326 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 S100a11P50543 98 aaKnown RBP7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Defa-rs7P50715 91 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 St3gal3P97325 374 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Bex6Q3TZW7 114 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Nufip2Q5F2E7 692 aaKnown RBP7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 TefmQ5SSK3 364 aaKnown RBP7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Pon3Q62087 354 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Ranbp3lQ6PDH4 491 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Slc22a20Q80UJ1 556 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 SynprQ8BGN8 265 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Ssuh2Q8C3L1 340 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Cdc42ep2Q8JZX9 214 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 PhyhipQ8K0S0 330 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 FlcnQ8QZS3 579 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Olfr1138Q8VFQ9 311 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Olfr1122Q8VGT9 326 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Olfr974Q8VH09 310 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Lmntd1Q9D4C1 413 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 TinagQ9WUR0 475 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 NbeaQ9EPN1 2936 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Flg2Q2VIS4 2362 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Pira2F8VQ94 680 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Smim22J3QP37 91 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Rab11bP46638 218 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Ube2nP61089 152 aaKnown RBP7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Idh3gP70404 393 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Fabp5Q05816 135 aaKnown RBP7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 CbfbQ08024 187 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 PilrbQ2YFS2 224 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Nr1d2Q60674 576 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Oas1bQ60856 376 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Alkbh2Q6P6J4 239 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Snrnp40Q6PE01 358 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Sh3bgrl2Q8BG73 107 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Gpr89aQ8BS95 455 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Stfa2l1Q8BWM3 103 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 AcppQ8CE08 381 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Olfr483Q8VG05 315 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Itfg2Q91WI7 443 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Raf1Q99N57 648 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Mid1ip1Q9CQ20 182 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Tmem175Q9CXY1 499 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Dnajc4Q9D844 244 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Acox3Q9EPL9 700 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Gpr37Q9QY42 600 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Ndufa7Q9Z1P6 113 aaKnown RBP7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Igkv19-93A0A0G2JFZ3 115 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Gm13083A2AGW5 501 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Gm10439A2AJU2 433 aaKnown RBP7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Olfr1511E9PWU0 318 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Vmn2r113E9PZA6 856 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Olfr1510E9PZZ6 318 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Gm6576F6YTZ4 274 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Cbr2P08074 244 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Rasl10bQ5SSG5 203 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Orm3Q63805 206 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 OmgQ63912 440 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Gpr173Q6PI62 373 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Olfr1162Q7TR28 314 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Akr1c18Q8K023 323 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Gtf2f2Q8R0A0 249 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Vmn1r21Q8R2C6 297 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Ccdc58Q8R3Q6 144 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Klhdc3Q8VEM9 382 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Nudt16l1Q8VHN8 211 aaKnown RBP7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 NifkQ91VE6 317 aaKnown RBP7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Cavin3Q91VJ2 260 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Mob1aQ921Y0 216 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Tpra1Q99MU1 369 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Dmac2Q9D7K5 258 aaKnown RBP7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Q9D8N1 392 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Alg5Q9DB25 324 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Prkar1aQ9DBC7 381 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 HikeshiQ9DD02 197 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 D17h6s53eQ9Z1R4 293 aa7.58□□□□□ -1.2
Trim39-201ENSMUST00000042717 Abca7Q91V24 2159 aa7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 Gm28897A0A087WP44 222 aa7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 Ighv1-24A0A0A6YY24 117 aa7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 Rpl7a-ps5A0A140T8L3 268 aa7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 Fbxw27A0A1D5RLF0 466 aa7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 Olfr329-psM9MMK4 331 aa7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 Hspb1P14602 209 aaKnown RBP7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 Rab3aP63011 220 aa7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 Opa3Q505D7 179 aa7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 Slc38a8Q5HZH7 432 aa7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 GfralQ6SJE0 393 aa7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 Znf787Q8BIF9 381 aa7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 Olfr678Q8VG26 313 aa7.57□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 59.7 ms