RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 ZxdcQ8C8V1 858 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Trib3Q8K4K2 354 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Olfr1241Q8VF91 314 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 SdhcQ9CZB0 169 aaKnown RBP9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Smdt1Q9DB10 107 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Gm14288E9Q9W0 88 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 CckarO08786 436 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Zic1P46684 447 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Cks2P56390 79 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Olfr3Q60879 313 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 SrmsQ62270 496 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Olfr43Q7TRX1 313 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Olfr403Q7TRX2 313 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Fbxo4Q8CHQ0 385 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Agpat4Q8K4X7 378 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Vmn1r220Q8R272 298 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Olfr360Q8VFP3 317 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Cldnd1Q9CQX5 253 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Gm9817Q9D2M0 144 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 SncaO55042 140 aaKnown RBP9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 H2-LP01897 362 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Gm6760Q0ZNK3 87 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Ttyh2Q3TH73 532 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Bloc1s3Q5U5M8 195 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Olfr1301Q8VGE7 312 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 4933407L21RikQ9D476 131 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Nkain4Q9JMG4 208 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Gm14862B1AV28 81 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Yjefn3F6W8I0 251 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Vipr2P41588 437 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Sox18P43680 377 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 TigitP86176 249 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Rac2Q05144 192 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Col9a2Q07643 688 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Olfr1442Q0VEV7 312 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Smim7Q5RKS2 75 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Znf770Q8BIQ8 705 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Dusp18Q8VE01 188 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Chrm5Q920H4 532 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Wdr77Q99J09 342 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Ogfod3Q9D136 315 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Prl8a1Q9DAV8 240 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Nudt3Q9JI46 168 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Nup98Q6PFD9 1816 aaKnown RBP9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Avpr2O88721 371 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Eef1a1P10126 462 aaKnown RBP9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Tnfrsf4P47741 272 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Atp4bP50992 294 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Cass4Q08EC4 804 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Col19a1Q0VF58 1136 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Thsd4Q3UTY6 1018 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Glb1lQ8VC60 646 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Olfr1378Q8VGH0 315 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Sectm1aQ921W8 192 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Znf346Q9R0B7 294 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Mmp24Q9R0S2 618 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Decr2Q9WV68 292 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Ighv1-13A0A075B5I0 98 aa9.19□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Gm45711E0CXA2 391 aa9.19□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Pde6dO55057 150 aa9.19□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Tgfb1P04202 390 aa9.19□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Zfp58P16372 489 aa9.19□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Col10a1Q05306 680 aa9.19□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Gp49aQ61450 303 aa9.19□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Slc22a13Q6A4L0 551 aa9.19□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Olfr374Q7TRY0 313 aa9.19□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Shisa7Q8C3Q5 558 aa9.19□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Olfr571E9Q407 322 aa9.19□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Olfr66F8VQ01 311 aa9.19□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Olfr152G3X9L8 316 aa9.19□□□□□ -0.94
Ubr1-201ENSMUST00000028728 TectbO08524 329 aa9.19□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Rbp2Q08652 134 aa9.19□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Cnrip1Q5M8N0 164 aa9.19□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Dmbx1Q91ZK4 381 aa9.19□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Lypd6bQ9D7F2 191 aa9.19□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Olfr943Q9EQ92 314 aa9.19□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Kif13bA0A286YCV9 1847 aa9.19□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Gpr33O88416 339 aa9.19□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Gpr3P35413 330 aa9.19□□□□□ -0.94
Ubr1-201ENSMUST00000028728 EnsaP60840 121 aa9.19□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Olfr1371Q7TQT7 311 aa9.19□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Smim4Q8C1Q6 80 aa9.19□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Clec2dQ91V08 207 aa9.19□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Clec6aQ9JKF4 209 aa9.19□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Lhx6Q9R1R0 363 aa9.19□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Zfp831A2ADM8 1628 aa9.19□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Igkv12-46A0A140T8P6 115 aa9.19□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Olfr721-ps1A0A140T8T9 324 aa9.19□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Rsg1A2A825 258 aa9.19□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Baz2bA2AUY4 2123 aa9.19□□□□□ -0.94
Ubr1-201ENSMUST00000028728 4930522L14RikE9QAG4 666 aa9.19□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Olfr889L7N1Y6 314 aa9.19□□□□□ -0.94
Ubr1-201ENSMUST00000028728 P2rx6O54803 389 aa9.19□□□□□ -0.94
Ubr1-201ENSMUST00000028728 GzmaP11032 260 aa9.19□□□□□ -0.94
Ubr1-201ENSMUST00000028728 RelP15307 587 aa9.19□□□□□ -0.94
Ubr1-201ENSMUST00000028728 PdgfbP31240 241 aa9.19□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Nrsn1P97799 196 aa9.19□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Znf503Q7TMA2 652 aa9.19□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Olfr921Q7TRC0 313 aa9.19□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Atpaf1Q811I0 324 aa9.19□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 46.1 ms