RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 ARL6IP5O75915 188 aa8.34□□□□□ -1.07
PHGDH-222ENST00000641587 CYB5R3P00387 301 aaPredicted RBP8.34□□□□□ -1.07
PHGDH-222ENST00000641587 OCMP0CE72 109 aaPredicted RBP8.34□□□□□ -1.07
PHGDH-222ENST00000641587 RPS2P15880 293 aaKnown RBP8.34□□□□□ -1.07
PHGDH-222ENST00000641587 FAHP16930 419 aa8.34□□□□□ -1.07
PHGDH-222ENST00000641587 CCL1P22362 96 aa8.34□□□□□ -1.07
PHGDH-222ENST00000641587 GALP22466 123 aa8.34□□□□□ -1.07
PHGDH-222ENST00000641587 CALRP27797 417 aaKnown RBP8.34□□□□□ -1.07
PHGDH-222ENST00000641587 MAP2K3P46734 347 aa8.34□□□□□ -1.07
PHGDH-222ENST00000641587 SERPINB10P48595 397 aa8.34□□□□□ -1.07
PHGDH-222ENST00000641587 GSK3AP49840 483 aa8.34□□□□□ -1.07
PHGDH-222ENST00000641587 RAG2P55895 527 aa8.34□□□□□ -1.07
PHGDH-222ENST00000641587 RPS11P62280 158 aaKnown RBP eCLIP8.34□□□□□ -1.07
PHGDH-222ENST00000641587 GK2Q14410 553 aaPredicted RBP8.34□□□□□ -1.07
PHGDH-222ENST00000641587 HLXQ14774 488 aaPredicted RBP8.34□□□□□ -1.07
PHGDH-222ENST00000641587 HSD17B12Q53GQ0 312 aa8.34□□□□□ -1.07
PHGDH-222ENST00000641587 FAM27D1Q5T7N8 215 aa8.34□□□□□ -1.07
PHGDH-222ENST00000641587 RUSC1-AS1Q66K80 236 aa8.34□□□□□ -1.07
PHGDH-222ENST00000641587 CD200R1LQ6Q8B3 271 aa8.34□□□□□ -1.07
PHGDH-222ENST00000641587 FIP1L1Q6UN15 594 aaKnown RBP8.34□□□□□ -1.07
PHGDH-222ENST00000641587 TMEM91Q6ZNR0 172 aa8.34□□□□□ -1.07
PHGDH-222ENST00000641587 GDPGP1Q6ZNW5 385 aa8.34□□□□□ -1.07
PHGDH-222ENST00000641587 C17orf107Q6ZR85 190 aa8.34□□□□□ -1.07
PHGDH-222ENST00000641587 C9orf139Q6ZV77 190 aa8.34□□□□□ -1.07
PHGDH-222ENST00000641587 PGAP1Q75T13 922 aa8.34□□□□□ -1.07
PHGDH-222ENST00000641587 OR5AS1Q8N127 324 aa8.34□□□□□ -1.07
PHGDH-222ENST00000641587 CCDC54Q8NEL0 328 aa8.34□□□□□ -1.07
PHGDH-222ENST00000641587 DACT3Q96B18 629 aaPredicted RBP8.34□□□□□ -1.07
PHGDH-222ENST00000641587 UPRTQ96BW1 309 aa8.34□□□□□ -1.07
PHGDH-222ENST00000641587 FGGYQ96C11 551 aa8.34□□□□□ -1.07
PHGDH-222ENST00000641587 C12orf43Q96C57 262 aaKnown RBP8.34□□□□□ -1.07
PHGDH-222ENST00000641587 ORAI1Q96D31 301 aa8.34□□□□□ -1.07
PHGDH-222ENST00000641587 KCTD7Q96MP8 289 aa8.34□□□□□ -1.07
PHGDH-222ENST00000641587 DERL3Q96Q80 235 aa8.34□□□□□ -1.07
PHGDH-222ENST00000641587 OR2V2Q96R30 315 aa8.34□□□□□ -1.07
PHGDH-222ENST00000641587 SSBP3Q9BWW4 388 aaPredicted RBP8.34□□□□□ -1.07
PHGDH-222ENST00000641587 RBM38Q9H0Z9 239 aaKnown RBP8.34□□□□□ -1.07
PHGDH-222ENST00000641587 RNF167Q9H6Y7 350 aa8.34□□□□□ -1.07
PHGDH-222ENST00000641587 NOX4Q9NPH5 578 aa8.34□□□□□ -1.07
PHGDH-222ENST00000641587 PPP1R3CQ9UQK1 317 aa8.34□□□□□ -1.07
PHGDH-222ENST00000641587 PIGLQ9Y2B2 252 aa8.34□□□□□ -1.07
PHGDH-222ENST00000641587 MMP24Q9Y5R2 645 aa8.34□□□□□ -1.07
PHGDH-222ENST00000641587 hCG_38984A0A1B0GV85 526 aa8.33□□□□□ -1.08
PHGDH-222ENST00000641587 A6NIN4 97 aa8.33□□□□□ -1.08
PHGDH-222ENST00000641587 H3BMQ9 156 aa8.33□□□□□ -1.08
PHGDH-222ENST00000641587 SLC22A1O15245 554 aa8.33□□□□□ -1.08
PHGDH-222ENST00000641587 ICMTO60725 284 aa8.33□□□□□ -1.08
PHGDH-222ENST00000641587 IGLV3-1P01715 115 aa8.33□□□□□ -1.08
PHGDH-222ENST00000641587 WNT2P09544 360 aa8.33□□□□□ -1.08
PHGDH-222ENST00000641587 SELEP16581 610 aa8.33□□□□□ -1.08
PHGDH-222ENST00000641587 TNFRSF1AP19438 455 aa8.33□□□□□ -1.08
PHGDH-222ENST00000641587 FGF9P31371 208 aaPredicted RBP8.33□□□□□ -1.08
PHGDH-222ENST00000641587 TGFBR1P36897 503 aa8.33□□□□□ -1.08
PHGDH-222ENST00000641587 MDH2P40926 338 aaKnown RBP8.33□□□□□ -1.08
PHGDH-222ENST00000641587 PPP3R1P63098 170 aa8.33□□□□□ -1.08
PHGDH-222ENST00000641587 FAM3AP98173 230 aa8.33□□□□□ -1.08
PHGDH-222ENST00000641587 HOXA4Q00056 320 aaPredicted RBP8.33□□□□□ -1.08
PHGDH-222ENST00000641587 RIPPLY1Q0D2K3 151 aa8.33□□□□□ -1.08
PHGDH-222ENST00000641587 CTF1Q16619 201 aa8.33□□□□□ -1.08
PHGDH-222ENST00000641587 FAM201AQ5SY85 155 aa8.33□□□□□ -1.08
PHGDH-222ENST00000641587 FOXB2Q5VYV0 432 aa8.33□□□□□ -1.08
PHGDH-222ENST00000641587 BHLHE23Q8NDY6 225 aa8.33□□□□□ -1.08
PHGDH-222ENST00000641587 OR10AD1Q8NGE0 317 aa8.33□□□□□ -1.08
PHGDH-222ENST00000641587 OR56B2PQ8NGI1 322 aa8.33□□□□□ -1.08
PHGDH-222ENST00000641587 OR14K1Q8NGZ2 314 aa8.33□□□□□ -1.08
PHGDH-222ENST00000641587 PHYHIPQ92561 330 aa8.33□□□□□ -1.08
PHGDH-222ENST00000641587 SPSB4Q96A44 273 aa8.33□□□□□ -1.08
PHGDH-222ENST00000641587 DGCR14Q96DF8 476 aaKnown RBP8.33□□□□□ -1.08
PHGDH-222ENST00000641587 CMBLQ96DG6 245 aa8.33□□□□□ -1.08
PHGDH-222ENST00000641587 CITED1Q99966 193 aa8.33□□□□□ -1.08
PHGDH-222ENST00000641587 BCL7BQ9BQE9 202 aa8.33□□□□□ -1.08
PHGDH-222ENST00000641587 CHIAQ9BZP6 476 aa8.33□□□□□ -1.08
PHGDH-222ENST00000641587 TCF7L1Q9HCS4 588 aa8.33□□□□□ -1.08
PHGDH-222ENST00000641587 GCM1Q9NP62 436 aa8.33□□□□□ -1.08
PHGDH-222ENST00000641587 TAS2R4Q9NYW5 299 aa8.33□□□□□ -1.08
PHGDH-222ENST00000641587 C1RLQ9NZP8 487 aa8.33□□□□□ -1.08
PHGDH-222ENST00000641587 V9GYS6 101 aa8.33□□□□□ -1.08
PHGDH-222ENST00000641587 TRBV5-7A0A0A0MS05 114 aa8.32□□□□□ -1.08
PHGDH-222ENST00000641587 ZNF816-ZNF321PA0A0X1KG74 233 aa8.32□□□□□ -1.08
PHGDH-222ENST00000641587 SMIM30A4D0T7 59 aa8.32□□□□□ -1.08
PHGDH-222ENST00000641587 ANKRD61A6NGH8 418 aa8.32□□□□□ -1.08
PHGDH-222ENST00000641587 ANKRD30BLA7E2S9 258 aa8.32□□□□□ -1.08
PHGDH-222ENST00000641587 SRRM5B3KS81 715 aa8.32□□□□□ -1.08
PHGDH-222ENST00000641587 ZNF701M0R085 212 aaPredicted RBP8.32□□□□□ -1.08
PHGDH-222ENST00000641587 SC5DO75845 299 aa8.32□□□□□ -1.08
PHGDH-222ENST00000641587 CDRT1O95170 752 aa8.32□□□□□ -1.08
PHGDH-222ENST00000641587 TSPAN15O95858 294 aa8.32□□□□□ -1.08
PHGDH-222ENST00000641587 UCHL1P09936 223 aa8.32□□□□□ -1.08
PHGDH-222ENST00000641587 KITLGP21583 273 aa8.32□□□□□ -1.08
PHGDH-222ENST00000641587 TUBG1P23258 451 aa8.32□□□□□ -1.08
PHGDH-222ENST00000641587 TNFSF4P23510 183 aa8.32□□□□□ -1.08
PHGDH-222ENST00000641587 ACKR3P25106 362 aa8.32□□□□□ -1.08
PHGDH-222ENST00000641587 GNB2P62879 340 aa8.32□□□□□ -1.08
PHGDH-222ENST00000641587 MXD1Q05195 221 aa8.32□□□□□ -1.08
PHGDH-222ENST00000641587 SPCS2Q15005 226 aa8.32□□□□□ -1.08
PHGDH-222ENST00000641587 OR8B8Q15620 311 aa8.32□□□□□ -1.08
PHGDH-222ENST00000641587 OLFML2AQ68BL7 652 aa8.32□□□□□ -1.08
PHGDH-222ENST00000641587 ASPHD2Q6ICH7 369 aa8.32□□□□□ -1.08
PHGDH-222ENST00000641587 OR2T2Q6IF00 324 aa8.32□□□□□ -1.08
PHGDH-222ENST00000641587 BTNL3Q6UXE8 466 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms