RNA–Protein interactions for RNA: ENST00000639667.1

HNRNPU-220, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 2

Gene HNRNPU, Length 3,940 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-220ENST00000639667 RFPL4AA6NLU0 287 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 RFPL4AL1F8VTS6 287 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 DEGS1O15121 323 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 TFAP2AP05549 437 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 PTGFRP43088 359 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 RPS11P62280 158 aaKnown RBP eCLIP4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 SHEQ5VZ18 495 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 RNF144BQ7Z419 303 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 FAM58AQ8N1B3 248 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 SPICQ8N5J4 248 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 DTX3Q8N9I9 347 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 WFDC11Q8NEX6 87 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 OR51D1Q8NGF3 324 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 AQP3Q92482 292 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 RNF166Q96A37 237 aaPredicted RBP4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 CNTD2Q9H8S5 307 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 CHMP1AQ9HD42 196 aaPredicted RBP4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 RBFOX1Q9NWB1 397 aaKnown RBP4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 MRPS7Q9Y2R9 242 aaKnown RBP4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 A0A0B4J203 849 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 TMEM178BH3BS89 294 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 NDUFB3O43676 98 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 UCHL1P09936 223 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 ARSBP15848 533 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 JUNBP17275 347 aaPredicted RBP4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 EGR1P18146 543 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 SOX6P35712 828 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 PMELP40967 661 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 NPBWR2P48146 333 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 DSCR9P59020 149 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 BTG1P62324 171 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 ESCO2Q56NI9 601 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 WDR82Q6UXN9 313 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 SLC36A1Q7Z2H8 476 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 TRAPPC6BQ86SZ2 158 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 WDR86Q86TI4 376 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 NKAIN3Q8N8D7 197 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 OR8B3Q8NGG8 313 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 PHYHIPQ92561 330 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 ERGIC1Q969X5 290 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 NEDD4LQ96PU5 975 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 OR8B2Q96RD0 313 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 GSX2Q9BZM3 304 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 CST11Q9H112 138 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 DCSTAMPQ9H295 470 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 OR51I2Q9H344 312 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 KCNK15Q9H427 330 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 NLKQ9UBE8 527 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 COMMD3Q9UBI1 195 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 CSPG4Q6UVK1 2322 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 TRBV5-7A0A0A0MS05 114 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 A0A1W2PQ09 198 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 PQLC2LA1A4F0 135 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 OOEPA6NGQ2 149 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 IFNL4K9M1U5 179 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 MDH2P40926 338 aaKnown RBP4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 TAF9Q16594 264 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 FAM185AQ8N0U4 392 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 PPP1R35Q8TAP8 253 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 RAB39BQ96DA2 213 aa4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 URM1Q9BTM9 101 aaKnown RBP4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 PPIL3Q9H2H8 161 aaKnown RBP4.89□□□□□ -1.63
HNRNPU-220ENST00000639667 ARFGEF3Q5TH69 2177 aa4.88□□□□□ -1.63
HNRNPU-220ENST00000639667 IGKV1-27A0A075B6S5 117 aa4.88□□□□□ -1.63
HNRNPU-220ENST00000639667 OVOL3O00110 214 aa4.88□□□□□ -1.63
HNRNPU-220ENST00000639667 SH2D1BO14796 132 aa4.88□□□□□ -1.63
HNRNPU-220ENST00000639667 PHF1O43189 567 aaPredicted RBP4.88□□□□□ -1.63
HNRNPU-220ENST00000639667 CD1AP06126 327 aa4.88□□□□□ -1.63
HNRNPU-220ENST00000639667 GTF2F2P13984 249 aa4.88□□□□□ -1.63
HNRNPU-220ENST00000639667 USF1P22415 310 aaPredicted RBP4.88□□□□□ -1.63
HNRNPU-220ENST00000639667 RANBP1P43487 201 aa4.88□□□□□ -1.63
HNRNPU-220ENST00000639667 GNB2P62879 340 aa4.88□□□□□ -1.63
HNRNPU-220ENST00000639667 PAN3Q58A45 887 aaKnown RBP4.88□□□□□ -1.63
HNRNPU-220ENST00000639667 MUC20Q8N307 709 aaPredicted RBP4.88□□□□□ -1.63
HNRNPU-220ENST00000639667 OR6M1Q8NGM8 313 aa4.88□□□□□ -1.63
HNRNPU-220ENST00000639667 OR13F1Q8NGS4 319 aa4.88□□□□□ -1.63
HNRNPU-220ENST00000639667 NINJ1Q92982 152 aa4.88□□□□□ -1.63
HNRNPU-220ENST00000639667 REG4Q9BYZ8 158 aa4.88□□□□□ -1.63
HNRNPU-220ENST00000639667 C6orf62Q9GZU0 229 aaPredicted RBP4.88□□□□□ -1.63
HNRNPU-220ENST00000639667 FGF23Q9GZV9 251 aaPredicted RBP4.88□□□□□ -1.63
HNRNPU-220ENST00000639667 CHST6Q9GZX3 395 aa4.88□□□□□ -1.63
HNRNPU-220ENST00000639667 ATG5Q9H1Y0 275 aa4.88□□□□□ -1.63
HNRNPU-220ENST00000639667 ZNF701Q9NV72 531 aaPredicted RBP4.88□□□□□ -1.63
HNRNPU-220ENST00000639667 CLN8Q9UBY8 286 aa4.88□□□□□ -1.63
HNRNPU-220ENST00000639667 ST3GAL6Q9Y274 331 aa4.88□□□□□ -1.63
HNRNPU-220ENST00000639667 OR2AT4A6NND4 320 aa4.88□□□□□ -1.63
HNRNPU-220ENST00000639667 IGLV3-1P01715 115 aa4.88□□□□□ -1.63
HNRNPU-220ENST00000639667 CD55P08174 381 aa4.88□□□□□ -1.63
HNRNPU-220ENST00000639667 SNRPBP14678 240 aaKnown RBP4.88□□□□□ -1.63
HNRNPU-220ENST00000639667 PRDX2P32119 198 aa4.88□□□□□ -1.63
HNRNPU-220ENST00000639667 PITPNBP48739 271 aa4.88□□□□□ -1.63
HNRNPU-220ENST00000639667 LCN2P80188 198 aa4.88□□□□□ -1.63
HNRNPU-220ENST00000639667 GPR176Q14439 515 aa4.88□□□□□ -1.63
HNRNPU-220ENST00000639667 ZMYND11Q15326 602 aa4.88□□□□□ -1.63
HNRNPU-220ENST00000639667 LRRC10Q5BKY1 277 aa4.88□□□□□ -1.63
HNRNPU-220ENST00000639667 TMEM42Q69YG0 159 aa4.88□□□□□ -1.63
HNRNPU-220ENST00000639667 BRICD5Q6PL45 260 aa4.88□□□□□ -1.63
HNRNPU-220ENST00000639667 UNQ9370/PRO34162Q6UXP9 181 aa4.88□□□□□ -1.63
HNRNPU-220ENST00000639667 USP43Q70EL4 1123 aa4.88□□□□□ -1.63
HNRNPU-220ENST00000639667 GDPD3Q7L5L3 318 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms