RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 TMEM189A5PLL7 270 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 GMNCA6NCL1 334 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 LYRM9A8MSI8 78 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 IDSB3KWA1 339 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 TCP10L2B9ZVM9 353 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 E7EQ34 232 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 I3L521 148 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 K7EMT4 169 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 CORTO00230 105 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 TNFRSF11BO00300 401 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 RNASET2O00584 256 aaKnown RBP2.51□□□□□ -2.01
VIM-210ENST00000637053 CCL21O00585 134 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 NME4O00746 187 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 MRPS12O15235 138 aaKnown RBP2.51□□□□□ -2.01
VIM-210ENST00000637053 SPRY3O43610 288 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 SNAP91O60641 907 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 WDR1O75083 606 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 LYPD3O95274 346 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 CLDN1O95832 211 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 C6orf47O95873 294 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 TBX6O95947 436 aaPredicted RBP2.51□□□□□ -2.01
VIM-210ENST00000637053 RENP00797 406 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 IGLV2-14P01704 120 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 H1F0P07305 194 aaKnown RBP2.51□□□□□ -2.01
VIM-210ENST00000637053 PFN1P07737 140 aaKnown RBP2.51□□□□□ -2.01
VIM-210ENST00000637053 ELANEP08246 267 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 OR5AL1P0C617 328 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 OR5H8P0DN80 308 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 CD99P14209 185 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 PVRP15151 417 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 MYOD1P15172 320 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 GABRG2P18507 467 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 COX5AP20674 150 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 KDELR1P24390 212 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 CASP1P29466 404 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 ARL2P36404 184 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 UBE2E1P51965 193 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 RAB38P57729 211 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 RAB5BP61020 215 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 COPZ1P61923 177 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 SELENOWP63302 87 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 ARL16Q0P5N6 197 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 PLCXD2Q0VAA5 305 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 OXA1LQ15070 435 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 OR8B8Q15620 311 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 CLEC12BQ2HXU8 276 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 ATP6AP1LQ52LC2 224 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 RNASE12Q5GAN4 147 aaKnown RBP2.51□□□□□ -2.01
VIM-210ENST00000637053 C1orf194Q5T5A4 169 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 ASPHD1Q5U4P2 390 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 ZFAND6Q6FIF0 208 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 C8orf82Q6P1X6 216 aaPredicted RBP2.51□□□□□ -2.01
VIM-210ENST00000637053 NAPRTQ6XQN6 538 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 ZNF620Q6ZNG0 422 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 CHMP1BQ7LBR1 199 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 CALHM3Q86XJ0 350 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 SNX29P2Q8IUI4 249 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 KLHDC8BQ8IXV7 354 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 FAM24BQ8N5W8 94 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 TSTD1Q8NFU3 115 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 OR5AR1Q8NGP9 310 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 OR5R1Q8NH85 324 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 TMEM18Q96B42 140 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 ROPN1LQ96C74 230 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 ZNF419Q96HQ0 510 aaPredicted RBP2.51□□□□□ -2.01
VIM-210ENST00000637053 SLC35G5Q96KT7 338 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 PGLYRP3Q96LB9 341 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 HSFY1Q96LI6 401 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 UBE2E2Q96LR5 201 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 LINC00477Q96M19 166 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 CCDC115Q96NT0 180 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 COL21A1Q96P44 957 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 GPR82Q96P67 336 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 NEDD4LQ96PU5 975 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 GFM1Q96RP9 751 aaKnown RBP2.51□□□□□ -2.01
VIM-210ENST00000637053 TBX15Q96SF7 602 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 PSMB7Q99436 277 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 FAM173AQ9BQD7 235 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 LXNQ9BS40 222 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 FAAP24Q9BTP7 215 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 MROQ9BYG7 248 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 SLC17A9Q9BYT1 436 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 LINC00470Q9BZP3 86 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 RBKSQ9H477 322 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 CST9LQ9H4G1 147 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 REEP1Q9H902 201 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 SPHK2Q9NRA0 654 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 PLSCR3Q9NRY6 295 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 COMMD9Q9P000 198 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 METTL1Q9UBP6 276 aaKnown RBP2.51□□□□□ -2.01
VIM-210ENST00000637053 KCNE5Q9UJ90 142 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 CES1P1Q9UKY3 287 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 NTNG1Q9Y2I2 539 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.51□□□□□ -2.01
VIM-210ENST00000637053 OR51B2Q9Y5P1 312 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 ARHGAP35Q9NRY4 1499 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 MIA2Q96PC5 1412 aa2.51□□□□□ -2.01
VIM-210ENST00000637053 METP08581 1390 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 COL22A1Q8NFW1 1626 aaPredicted RBP2.5□□□□□ -2.01
VIM-210ENST00000637053 TRBV5-5A0A0J9YX44 114 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms