RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 TRBV5-5A0A0J9YX44 114 aa8.1□□□□□ -1.11
LINC00339-210ENST00000635675 A0A0X1KG70 313 aa8.1□□□□□ -1.11
LINC00339-210ENST00000635675 ADAM20O43506 726 aa8.1□□□□□ -1.11
LINC00339-210ENST00000635675 FCN3O75636 299 aa8.1□□□□□ -1.11
LINC00339-210ENST00000635675 OCM2P0CE71 109 aa8.1□□□□□ -1.11
LINC00339-210ENST00000635675 CELP19835 753 aa8.1□□□□□ -1.11
LINC00339-210ENST00000635675 GLRA1P23415 457 aa8.1□□□□□ -1.11
LINC00339-210ENST00000635675 SOX2P48431 317 aa8.1□□□□□ -1.11
LINC00339-210ENST00000635675 RBP2P50120 134 aa8.1□□□□□ -1.11
LINC00339-210ENST00000635675 ATP1B3P54709 279 aa8.1□□□□□ -1.11
LINC00339-210ENST00000635675 MTCP1P56278 107 aa8.1□□□□□ -1.11
LINC00339-210ENST00000635675 GMFBP60983 142 aa8.1□□□□□ -1.11
LINC00339-210ENST00000635675 ERVK11-1P61568 191 aa8.1□□□□□ -1.11
LINC00339-210ENST00000635675 SPHARQ15513 63 aa8.1□□□□□ -1.11
LINC00339-210ENST00000635675 TBCEQ15813 527 aaPredicted RBP8.1□□□□□ -1.11
LINC00339-210ENST00000635675 YIF1BQ5BJH7 314 aa8.1□□□□□ -1.11
LINC00339-210ENST00000635675 FOXB2Q5VYV0 432 aa8.1□□□□□ -1.11
LINC00339-210ENST00000635675 FAHD2BQ6P2I3 314 aaPredicted RBP8.1□□□□□ -1.11
LINC00339-210ENST00000635675 CRIP3Q6Q6R5 217 aa8.1□□□□□ -1.11
LINC00339-210ENST00000635675 ACP7Q6ZNF0 438 aa8.1□□□□□ -1.11
LINC00339-210ENST00000635675 ZNF367Q7RTV3 350 aa8.1□□□□□ -1.11
LINC00339-210ENST00000635675 RNF144BQ7Z419 303 aa8.1□□□□□ -1.11
LINC00339-210ENST00000635675 OR4M2Q8NGB6 313 aa8.1□□□□□ -1.11
LINC00339-210ENST00000635675 OR13C5Q8NGS8 318 aa8.1□□□□□ -1.11
LINC00339-210ENST00000635675 ANGPTL6Q8NI99 470 aa8.1□□□□□ -1.11
LINC00339-210ENST00000635675 DACT3Q96B18 629 aaPredicted RBP8.1□□□□□ -1.11
LINC00339-210ENST00000635675 FAHD2AQ96GK7 314 aa8.1□□□□□ -1.11
LINC00339-210ENST00000635675 ZNF488Q96MN9 340 aa8.1□□□□□ -1.11
LINC00339-210ENST00000635675 OPALINQ96PE5 141 aa8.1□□□□□ -1.11
LINC00339-210ENST00000635675 CCL13Q99616 98 aa8.1□□□□□ -1.11
LINC00339-210ENST00000635675 NAA50Q9GZZ1 169 aaKnown RBP8.1□□□□□ -1.11
LINC00339-210ENST00000635675 DNTTIP1Q9H147 329 aa8.1□□□□□ -1.11
LINC00339-210ENST00000635675 HES4Q9HCC6 221 aa8.1□□□□□ -1.11
LINC00339-210ENST00000635675 BATF3Q9NR55 127 aa8.1□□□□□ -1.11
LINC00339-210ENST00000635675 SNTG1Q9NSN8 517 aa8.1□□□□□ -1.11
LINC00339-210ENST00000635675 MTCH1Q9NZJ7 389 aa8.1□□□□□ -1.11
LINC00339-210ENST00000635675 NLKQ9UBE8 527 aa8.1□□□□□ -1.11
LINC00339-210ENST00000635675 DNAJB11Q9UBS4 358 aa8.1□□□□□ -1.11
LINC00339-210ENST00000635675 CLN8Q9UBY8 286 aa8.1□□□□□ -1.11
LINC00339-210ENST00000635675 CDC42EP3Q9UKI2 254 aa8.1□□□□□ -1.11
LINC00339-210ENST00000635675 NAV3Q8IVL0 2385 aa8.09□□□□□ -1.11
LINC00339-210ENST00000635675 IGKV1D-17A0A075B6S4 117 aa8.09□□□□□ -1.11
LINC00339-210ENST00000635675 A0A1B0GW55 424 aa8.09□□□□□ -1.11
LINC00339-210ENST00000635675 A6NHS1 94 aa8.09□□□□□ -1.11
LINC00339-210ENST00000635675 OR2AT4A6NND4 320 aa8.09□□□□□ -1.11
LINC00339-210ENST00000635675 F8VVB4 439 aa8.09□□□□□ -1.11
LINC00339-210ENST00000635675 F8VWA3 439 aa8.09□□□□□ -1.11
LINC00339-210ENST00000635675 J3QLI3 93 aa8.09□□□□□ -1.11
LINC00339-210ENST00000635675 DVL1O14640 695 aa8.09□□□□□ -1.11
LINC00339-210ENST00000635675 TMPRSS2O15393 492 aa8.09□□□□□ -1.11
LINC00339-210ENST00000635675 SULT1B1O43704 296 aa8.09□□□□□ -1.11
LINC00339-210ENST00000635675 MRPS14O60783 128 aaKnown RBP8.09□□□□□ -1.11
LINC00339-210ENST00000635675 AVPP01185 164 aa8.09□□□□□ -1.11
LINC00339-210ENST00000635675 CD2P06729 351 aa8.09□□□□□ -1.11
LINC00339-210ENST00000635675 DUX4L2P0CJ85 424 aa8.09□□□□□ -1.11
LINC00339-210ENST00000635675 DUX4L3P0CJ86 424 aa8.09□□□□□ -1.11
LINC00339-210ENST00000635675 DUX4L4P0CJ87 422 aa8.09□□□□□ -1.11
LINC00339-210ENST00000635675 DUX4L5P0CJ88 424 aa8.09□□□□□ -1.11
LINC00339-210ENST00000635675 DUX4L6P0CJ89 424 aa8.09□□□□□ -1.11
LINC00339-210ENST00000635675 DUX4L7P0CJ90 424 aa8.09□□□□□ -1.11
LINC00339-210ENST00000635675 PSG2P11465 335 aa8.09□□□□□ -1.11
LINC00339-210ENST00000635675 JUNBP17275 347 aaPredicted RBP8.09□□□□□ -1.11
LINC00339-210ENST00000635675 GATA3P23771 443 aa8.09□□□□□ -1.11
LINC00339-210ENST00000635675 NPY4RP50391 375 aa8.09□□□□□ -1.11
LINC00339-210ENST00000635675 RIPPLY3P57055 190 aa8.09□□□□□ -1.11
LINC00339-210ENST00000635675 GNB2P62879 340 aa8.09□□□□□ -1.11
LINC00339-210ENST00000635675 CHRFAM7AQ494W8 412 aa8.09□□□□□ -1.11
LINC00339-210ENST00000635675 Q499Y3 187 aa8.09□□□□□ -1.11
LINC00339-210ENST00000635675 DCAF12L2Q5VW00 463 aa8.09□□□□□ -1.11
LINC00339-210ENST00000635675 DUX4L9Q6RFH8 374 aaPredicted RBP8.09□□□□□ -1.11
LINC00339-210ENST00000635675 ZNF788Q6ZQV5 615 aa8.09□□□□□ -1.11
LINC00339-210ENST00000635675 C1orf229Q6ZS94 237 aaPredicted RBP8.09□□□□□ -1.11
LINC00339-210ENST00000635675 LHFPL2Q6ZUX7 228 aa8.09□□□□□ -1.11
LINC00339-210ENST00000635675 SLC25A26Q70HW3 274 aa8.09□□□□□ -1.11
LINC00339-210ENST00000635675 TMEM106AQ96A25 262 aa8.09□□□□□ -1.11
LINC00339-210ENST00000635675 BEX2Q9BXY8 128 aa8.09□□□□□ -1.11
LINC00339-210ENST00000635675 TMPRSS13Q9BYE2 586 aa8.09□□□□□ -1.11
LINC00339-210ENST00000635675 SHARPINQ9H0F6 387 aa8.09□□□□□ -1.11
LINC00339-210ENST00000635675 SMURF1Q9HCE7 757 aa8.09□□□□□ -1.11
LINC00339-210ENST00000635675 DUX4Q9UBX2 424 aa8.09□□□□□ -1.11
LINC00339-210ENST00000635675 LPAR3Q9UBY5 353 aa8.09□□□□□ -1.11
LINC00339-210ENST00000635675 OR5V1Q9UGF6 321 aa8.09□□□□□ -1.11
LINC00339-210ENST00000635675 ZNF222Q9UK12 451 aa8.09□□□□□ -1.11
LINC00339-210ENST00000635675 INSIG2Q9Y5U4 225 aa8.09□□□□□ -1.11
LINC00339-210ENST00000635675 ZFHX3Q15911 3703 aa8.08□□□□□ -1.12
LINC00339-210ENST00000635675 TRBV5-7A0A0A0MS05 114 aa8.08□□□□□ -1.12
LINC00339-210ENST00000635675 KIR2DS1A0A191URI9 304 aa8.08□□□□□ -1.12
LINC00339-210ENST00000635675 NOL3O60936 208 aaKnown RBP8.08□□□□□ -1.12
LINC00339-210ENST00000635675 GPX5O75715 221 aa8.08□□□□□ -1.12
LINC00339-210ENST00000635675 NXPH2O95156 264 aa8.08□□□□□ -1.12
LINC00339-210ENST00000635675 PLATP00750 562 aa8.08□□□□□ -1.12
LINC00339-210ENST00000635675 TFF1P04155 84 aa8.08□□□□□ -1.12
LINC00339-210ENST00000635675 OCMP0CE72 109 aaPredicted RBP8.08□□□□□ -1.12
LINC00339-210ENST00000635675 RAB3AP20336 220 aa8.08□□□□□ -1.12
LINC00339-210ENST00000635675 LSM3P62310 102 aaKnown RBP8.08□□□□□ -1.12
LINC00339-210ENST00000635675 PDZK1IP1Q13113 114 aa8.08□□□□□ -1.12
LINC00339-210ENST00000635675 GPR50Q13585 617 aa8.08□□□□□ -1.12
LINC00339-210ENST00000635675 SMIM21Q3B7S5 101 aa8.08□□□□□ -1.12
LINC00339-210ENST00000635675 C11orf91Q3C1V1 193 aa8.08□□□□□ -1.12
LINC00339-210ENST00000635675 ARMCX4Q5H9R4 360 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms