RNA–Protein interactions for RNA: ENST00000623321.3

ATRX-211, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 1,860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-211ENST00000623321 GUSBP1Q15486 140 aa13.13□□□□□ -0.31
ATRX-211ENST00000623321 PAN3Q58A45 887 aaKnown RBP13.13□□□□□ -0.31
ATRX-211ENST00000623321 VAX1Q5SQQ9 334 aa13.13□□□□□ -0.31
ATRX-211ENST00000623321 FAM214BQ7L5A3 538 aa13.13□□□□□ -0.31
ATRX-211ENST00000623321 ABHD12BQ7Z5M8 362 aaPredicted RBP13.13□□□□□ -0.31
ATRX-211ENST00000623321 C9orf106Q8NAJ2 232 aa13.13□□□□□ -0.31
ATRX-211ENST00000623321 FBXO17Q96EF6 278 aa13.13□□□□□ -0.31
ATRX-211ENST00000623321 ARPC5LQ9BPX5 153 aa13.13□□□□□ -0.31
ATRX-211ENST00000623321 MRPS28Q9Y2Q9 187 aaKnown RBP13.13□□□□□ -0.31
ATRX-211ENST00000623321 CACNA1GO43497 2377 aa13.13□□□□□ -0.31
ATRX-211ENST00000623321 CACNA1AO00555 2505 aa13.13□□□□□ -0.31
ATRX-211ENST00000623321 TRBV6-7A0A0A0MS04 114 aa13.12□□□□□ -0.31
ATRX-211ENST00000623321 A0A0A6YYD4 124 aa13.12□□□□□ -0.31
ATRX-211ENST00000623321 FARS2O95363 451 aaKnown RBP13.12□□□□□ -0.31
ATRX-211ENST00000623321 CRHP06850 196 aa13.12□□□□□ -0.31
ATRX-211ENST00000623321 VAMP1P23763 118 aa13.12□□□□□ -0.31
ATRX-211ENST00000623321 TDGF1P3P51864 188 aa13.12□□□□□ -0.31
ATRX-211ENST00000623321 FAM189A2Q15884 450 aa13.12□□□□□ -0.31
ATRX-211ENST00000623321 FBXW9Q5XUX1 488 aa13.12□□□□□ -0.31
ATRX-211ENST00000623321 UQCC3Q6UW78 93 aa13.12□□□□□ -0.31
ATRX-211ENST00000623321 NAA40Q86UY6 237 aa13.12□□□□□ -0.31
ATRX-211ENST00000623321 CCDC36Q8IYA8 594 aa13.12□□□□□ -0.31
ATRX-211ENST00000623321 ARRDC1Q8N5I2 433 aa13.12□□□□□ -0.31
ATRX-211ENST00000623321 INO80EQ8NBZ0 244 aaPredicted RBP13.12□□□□□ -0.31
ATRX-211ENST00000623321 OR4K15Q8NH41 348 aa13.12□□□□□ -0.31
ATRX-211ENST00000623321 KCNG3Q8TAE7 436 aa13.12□□□□□ -0.31
ATRX-211ENST00000623321 STOML3Q8TAV4 291 aa13.12□□□□□ -0.31
ATRX-211ENST00000623321 NICN1Q9BSH3 213 aa13.12□□□□□ -0.31
ATRX-211ENST00000623321 NMES1Q9C002 83 aa13.12□□□□□ -0.31
ATRX-211ENST00000623321 PRORYQ9H606 182 aa13.12□□□□□ -0.31
ATRX-211ENST00000623321 TAS2R3Q9NYW6 316 aa13.12□□□□□ -0.31
ATRX-211ENST00000623321 MBD2Q9UBB5 411 aa13.12□□□□□ -0.31
ATRX-211ENST00000623321 PRSS50Q9UI38 385 aa13.12□□□□□ -0.31
ATRX-211ENST00000623321 NCOR2Q9Y618 2525 aa13.12□□□□□ -0.31
ATRX-211ENST00000623321 FIGNL2A6NMB9 653 aa13.12□□□□□ -0.31
ATRX-211ENST00000623321 FAM25EA8MYX2 175 aa13.12□□□□□ -0.31
ATRX-211ENST00000623321 CDC14BO60729 498 aa13.12□□□□□ -0.31
ATRX-211ENST00000623321 HIST1H1DP16402 221 aaKnown RBP13.12□□□□□ -0.31
ATRX-211ENST00000623321 AKR1C4P17516 323 aa13.12□□□□□ -0.31
ATRX-211ENST00000623321 CX3CR1P49238 355 aa13.12□□□□□ -0.31
ATRX-211ENST00000623321 GRB2P62993 217 aaKnown RBP13.12□□□□□ -0.31
ATRX-211ENST00000623321 ARF1P84077 181 aaKnown RBP13.12□□□□□ -0.31
ATRX-211ENST00000623321 ATXN7L3Q14CW9 347 aaPredicted RBP13.12□□□□□ -0.31
ATRX-211ENST00000623321 PNLIPRP3Q17RR3 467 aa13.12□□□□□ -0.31
ATRX-211ENST00000623321 GLIPR1L1Q6UWM5 242 aa13.12□□□□□ -0.31
ATRX-211ENST00000623321 ZNF101Q8IZC7 436 aa13.12□□□□□ -0.31
ATRX-211ENST00000623321 GCNT2Q8N0V5 402 aa13.12□□□□□ -0.31
ATRX-211ENST00000623321 KDF1Q8NAX2 398 aaPredicted RBP13.12□□□□□ -0.31
ATRX-211ENST00000623321 OR8B12Q8NGG6 310 aa13.12□□□□□ -0.31
ATRX-211ENST00000623321 FAM57AQ8TBR7 257 aa13.12□□□□□ -0.31
ATRX-211ENST00000623321 CASTOR1Q8WTX7 329 aa13.12□□□□□ -0.31
ATRX-211ENST00000623321 SNRNP40Q96DI7 357 aaKnown RBP13.12□□□□□ -0.31
ATRX-211ENST00000623321 PIGMQ9H3S5 423 aa13.12□□□□□ -0.31
ATRX-211ENST00000623321 PRELID1Q9Y255 219 aa13.12□□□□□ -0.31
ATRX-211ENST00000623321 A0A0B4J2A0 478 aa13.11□□□□□ -0.31
ATRX-211ENST00000623321 MBD3L4A6NDZ8 208 aaPredicted RBP13.11□□□□□ -0.31
ATRX-211ENST00000623321 MBD3L3A6NE82 208 aaPredicted RBP13.11□□□□□ -0.31
ATRX-211ENST00000623321 MBD3L5A6NJ08 208 aaPredicted RBP13.11□□□□□ -0.31
ATRX-211ENST00000623321 MPTX1A8MV57 137 aa13.11□□□□□ -0.31
ATRX-211ENST00000623321 F8VVB4 439 aa13.11□□□□□ -0.31
ATRX-211ENST00000623321 F8VWA3 439 aa13.11□□□□□ -0.31
ATRX-211ENST00000623321 TOR1AO14656 332 aa13.11□□□□□ -0.31
ATRX-211ENST00000623321 APOC3P02656 99 aa13.11□□□□□ -0.31
ATRX-211ENST00000623321 PMP2P02689 132 aa13.11□□□□□ -0.31
ATRX-211ENST00000623321 CTSSP25774 331 aa13.11□□□□□ -0.31
ATRX-211ENST00000623321 PSMB6P28072 239 aa13.11□□□□□ -0.31
ATRX-211ENST00000623321 ZNF121P58317 390 aaPredicted RBP13.11□□□□□ -0.31
ATRX-211ENST00000623321 PCBD1P61457 104 aa13.11□□□□□ -0.31
ATRX-211ENST00000623321 MICBQ29980 383 aa13.11□□□□□ -0.31
ATRX-211ENST00000623321 BEX5Q5H9J7 111 aa13.11□□□□□ -0.31
ATRX-211ENST00000623321 SLC16A14Q7RTX9 510 aa13.11□□□□□ -0.31
ATRX-211ENST00000623321 RTN4RL2Q86UN3 420 aa13.11□□□□□ -0.31
ATRX-211ENST00000623321 SKA3Q8IX90 412 aa13.11□□□□□ -0.31
ATRX-211ENST00000623321 TMEM185AQ8NFB2 350 aa13.11□□□□□ -0.31
ATRX-211ENST00000623321 TERB2Q8NHR7 220 aa13.11□□□□□ -0.31
ATRX-211ENST00000623321 MBD3L2Q8NHZ7 208 aaPredicted RBP13.11□□□□□ -0.31
ATRX-211ENST00000623321 MARCH1Q8TCQ1 289 aa13.11□□□□□ -0.31
ATRX-211ENST00000623321 RAB3CQ96E17 227 aa13.11□□□□□ -0.31
ATRX-211ENST00000623321 AIFM2Q9BRQ8 373 aa13.11□□□□□ -0.31
ATRX-211ENST00000623321 CHMP1AQ9HD42 196 aaPredicted RBP13.11□□□□□ -0.31
ATRX-211ENST00000623321 SHPKQ9UHJ6 478 aa13.11□□□□□ -0.31
ATRX-211ENST00000623321 MED12LQ86YW9 2145 aa13.11□□□□□ -0.31
ATRX-211ENST00000623321 TEX13DA0A0J9YY54 714 aaPredicted RBP13.1□□□□□ -0.31
ATRX-211ENST00000623321 F5H0A9 414 aaPredicted RBP13.1□□□□□ -0.31
ATRX-211ENST00000623321 ABOP16442 354 aa13.1□□□□□ -0.31
ATRX-211ENST00000623321 KIR2DL2P43627 348 aaPredicted RBP13.1□□□□□ -0.31
ATRX-211ENST00000623321 FOXG1P55316 489 aaPredicted RBP13.1□□□□□ -0.31
ATRX-211ENST00000623321 CYCSP99999 105 aaKnown RBP13.1□□□□□ -0.31
ATRX-211ENST00000623321 SCRN3Q0VDG4 424 aa13.1□□□□□ -0.31
ATRX-211ENST00000623321 TMEM128Q5BJH2 165 aa13.1□□□□□ -0.31
ATRX-211ENST00000623321 PLAC9Q5JTB6 97 aa13.1□□□□□ -0.31
ATRX-211ENST00000623321 C1orf185Q5T7R7 199 aa13.1□□□□□ -0.31
ATRX-211ENST00000623321 C9orf135Q5VTT2 229 aa13.1□□□□□ -0.31
ATRX-211ENST00000623321 RTL6Q6ICC9 239 aa13.1□□□□□ -0.31
ATRX-211ENST00000623321 ATRAIDQ6UW56 229 aa13.1□□□□□ -0.31
ATRX-211ENST00000623321 KCTD9Q7L273 389 aa13.1□□□□□ -0.31
ATRX-211ENST00000623321 DOK3Q7L591 496 aa13.1□□□□□ -0.31
ATRX-211ENST00000623321 RNF144BQ7Z419 303 aa13.1□□□□□ -0.31
ATRX-211ENST00000623321 TMEM104Q8NE00 496 aa13.1□□□□□ -0.31
ATRX-211ENST00000623321 BPIFCQ8NFQ6 507 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 174.4 ms