RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 ASAH1Q13510 395 aa9.05□□□□□ -0.96
VPS11-208ENST00000621676 Q6ZS92 163 aa9.05□□□□□ -0.96
VPS11-208ENST00000621676 OR10R2Q8NGX6 335 aa9.05□□□□□ -0.96
VPS11-208ENST00000621676 POM121L2Q96KW2 1035 aa9.05□□□□□ -0.96
VPS11-208ENST00000621676 ACTR6Q9GZN1 396 aa9.05□□□□□ -0.96
VPS11-208ENST00000621676 FGF23Q9GZV9 251 aaPredicted RBP9.05□□□□□ -0.96
VPS11-208ENST00000621676 PPA2Q9H2U2 334 aa9.05□□□□□ -0.96
VPS11-208ENST00000621676 BCO1Q9HAY6 547 aa9.05□□□□□ -0.96
VPS11-208ENST00000621676 PALMDQ9NP74 551 aa9.05□□□□□ -0.96
VPS11-208ENST00000621676 GABARAPH6UMI1 98 aa9.05□□□□□ -0.96
VPS11-208ENST00000621676 TNFSF13O75888 250 aa9.05□□□□□ -0.96
VPS11-208ENST00000621676 RCC1P18754 421 aaPredicted RBP9.05□□□□□ -0.96
VPS11-208ENST00000621676 CD53P19397 219 aa9.05□□□□□ -0.96
VPS11-208ENST00000621676 PSMB1P20618 241 aaKnown RBP9.05□□□□□ -0.96
VPS11-208ENST00000621676 PSG7Q13046 419 aa9.05□□□□□ -0.96
VPS11-208ENST00000621676 TBC1D28Q2M2D7 210 aa9.05□□□□□ -0.96
VPS11-208ENST00000621676 SPIN3Q5JUX0 258 aa9.05□□□□□ -0.96
VPS11-208ENST00000621676 TMEM53Q6P2H8 277 aa9.05□□□□□ -0.96
VPS11-208ENST00000621676 BCL2L2Q92843 193 aaPredicted RBP9.05□□□□□ -0.96
VPS11-208ENST00000621676 MUCL1Q96DR8 90 aa9.05□□□□□ -0.96
VPS11-208ENST00000621676 SULT4A1Q9BR01 284 aa9.05□□□□□ -0.96
VPS11-208ENST00000621676 NOP16Q9Y3C1 178 aaKnown RBP9.05□□□□□ -0.96
VPS11-208ENST00000621676 COL27A1Q8IZC6 1860 aaPredicted RBP9.05□□□□□ -0.96
VPS11-208ENST00000621676 MTORP42345 2549 aa9.04□□□□□ -0.96
VPS11-208ENST00000621676 CPN1P15169 458 aa9.04□□□□□ -0.96
VPS11-208ENST00000621676 GLRA1P23415 457 aa9.04□□□□□ -0.96
VPS11-208ENST00000621676 CFL1P23528 166 aaKnown RBP9.04□□□□□ -0.96
VPS11-208ENST00000621676 ECH1Q13011 328 aa9.04□□□□□ -0.96
VPS11-208ENST00000621676 OR2B11Q5JQS5 317 aa9.04□□□□□ -0.96
VPS11-208ENST00000621676 ADAD2Q8NCV1 583 aaKnown RBP9.04□□□□□ -0.96
VPS11-208ENST00000621676 ZCCHC14Q8WYQ9 949 aaKnown RBP9.04□□□□□ -0.96
VPS11-208ENST00000621676 WBP1Q96G27 269 aa9.04□□□□□ -0.96
VPS11-208ENST00000621676 DCTN5Q9BTE1 182 aa9.04□□□□□ -0.96
VPS11-208ENST00000621676 CHST5Q9GZS9 411 aa9.04□□□□□ -0.96
VPS11-208ENST00000621676 FAM234AQ9H0X4 552 aa9.04□□□□□ -0.96
VPS11-208ENST00000621676 CST11Q9H112 138 aa9.04□□□□□ -0.96
VPS11-208ENST00000621676 CA10Q9NS85 328 aa9.04□□□□□ -0.96
VPS11-208ENST00000621676 RNF150Q9ULK6 438 aa9.04□□□□□ -0.96
VPS11-208ENST00000621676 ZANQ9Y493 2812 aa9.04□□□□□ -0.96
VPS11-208ENST00000621676 LYNX1G3V0Z9 82 aa9.04□□□□□ -0.96
VPS11-208ENST00000621676 CCL21O00585 134 aa9.04□□□□□ -0.96
VPS11-208ENST00000621676 ISG15P05161 165 aa9.04□□□□□ -0.96
VPS11-208ENST00000621676 LYNX1P0DP58 116 aa9.04□□□□□ -0.96
VPS11-208ENST00000621676 SELLP14151 372 aa9.04□□□□□ -0.96
VPS11-208ENST00000621676 ARPC4P59998 168 aa9.04□□□□□ -0.96
VPS11-208ENST00000621676 KCNJ8Q15842 424 aa9.04□□□□□ -0.96
VPS11-208ENST00000621676 GABRA6Q16445 453 aa9.04□□□□□ -0.96
VPS11-208ENST00000621676 OR2T35Q8NGX2 323 aa9.04□□□□□ -0.96
VPS11-208ENST00000621676 KCNG3Q8TAE7 436 aa9.04□□□□□ -0.96
VPS11-208ENST00000621676 RAB40AQ8WXH6 277 aa9.04□□□□□ -0.96
VPS11-208ENST00000621676 CMSS1Q9BQ75 279 aaKnown RBP9.04□□□□□ -0.96
VPS11-208ENST00000621676 SOSTQ9BQB4 213 aa9.04□□□□□ -0.96
VPS11-208ENST00000621676 URM1Q9BTM9 101 aaKnown RBP9.04□□□□□ -0.96
VPS11-208ENST00000621676 PDCD10Q9BUL8 212 aa9.04□□□□□ -0.96
VPS11-208ENST00000621676 MGAT4CQ9UBM8 478 aa9.04□□□□□ -0.96
VPS11-208ENST00000621676 KCNN3Q9UGI6 736 aa9.04□□□□□ -0.96
VPS11-208ENST00000621676 PLXNB1O43157 2135 aa9.04□□□□□ -0.96
VPS11-208ENST00000621676 IGHV3-43A0A0B4J1X8 118 aa9.03□□□□□ -0.96
VPS11-208ENST00000621676 DHRS7CA6NNS2 312 aa9.03□□□□□ -0.96
VPS11-208ENST00000621676 IGHV3-43DP0DP04 118 aa9.03□□□□□ -0.96
VPS11-208ENST00000621676 SLC6A1P30531 599 aa9.03□□□□□ -0.96
VPS11-208ENST00000621676 CALCRP30988 508 aa9.03□□□□□ -0.96
VPS11-208ENST00000621676 UQCRFS1P47985 274 aa9.03□□□□□ -0.96
VPS11-208ENST00000621676 UCP2P55851 309 aa9.03□□□□□ -0.96
VPS11-208ENST00000621676 IGSF11Q5DX21 431 aa9.03□□□□□ -0.96
VPS11-208ENST00000621676 CLVS2Q5SYC1 327 aa9.03□□□□□ -0.96
VPS11-208ENST00000621676 KLF14Q8TD94 323 aaPredicted RBP9.03□□□□□ -0.96
VPS11-208ENST00000621676 HPSE2Q8WWQ2 592 aa9.03□□□□□ -0.96
VPS11-208ENST00000621676 CLCF1Q9UBD9 225 aa9.03□□□□□ -0.96
VPS11-208ENST00000621676 RAB22AQ9UL26 194 aa9.03□□□□□ -0.96
VPS11-208ENST00000621676 A0A0G2JNJ9 132 aa9.03□□□□□ -0.96
VPS11-208ENST00000621676 hCG_38984A0A1B0GV85 526 aa9.03□□□□□ -0.96
VPS11-208ENST00000621676 NPIPB13A6NJU9 1138 aa9.03□□□□□ -0.96
VPS11-208ENST00000621676 NPIPB4C9JG80 1138 aa9.03□□□□□ -0.96
VPS11-208ENST00000621676 K7ENP7 123 aa9.03□□□□□ -0.96
VPS11-208ENST00000621676 GOSR2O14653 212 aa9.03□□□□□ -0.96
VPS11-208ENST00000621676 HOXB5P09067 269 aa9.03□□□□□ -0.96
VPS11-208ENST00000621676 ATP1B3P54709 279 aa9.03□□□□□ -0.96
VPS11-208ENST00000621676 DLX1P56177 255 aa9.03□□□□□ -0.96
VPS11-208ENST00000621676 KLF9Q13886 244 aaPredicted RBP9.03□□□□□ -0.96
VPS11-208ENST00000621676 MSMPQ1L6U9 139 aa9.03□□□□□ -0.96
VPS11-208ENST00000621676 CHRFAM7AQ494W8 412 aa9.03□□□□□ -0.96
VPS11-208ENST00000621676 INO80CQ6PI98 192 aaPredicted RBP9.03□□□□□ -0.96
VPS11-208ENST00000621676 CLEC9AQ6UXN8 241 aa9.03□□□□□ -0.96
VPS11-208ENST00000621676 EMG1Q92979 244 aaKnown RBP9.03□□□□□ -0.96
VPS11-208ENST00000621676 METTL9Q9H1A3 318 aa9.03□□□□□ -0.96
VPS11-208ENST00000621676 OR51J1Q9H342 316 aa9.03□□□□□ -0.96
VPS11-208ENST00000621676 MTCH1Q9NZJ7 389 aa9.03□□□□□ -0.96
VPS11-208ENST00000621676 Q9UFV3 132 aa9.03□□□□□ -0.96
VPS11-208ENST00000621676 MSRB2Q9Y3D2 182 aa9.03□□□□□ -0.96
VPS11-208ENST00000621676 FXYD6-FXYD2A0A087WZ82 144 aa9.03□□□□□ -0.96
VPS11-208ENST00000621676 ZNF816-ZNF321PA0A0X1KG74 233 aa9.03□□□□□ -0.96
VPS11-208ENST00000621676 ABCD4O14678 606 aa9.03□□□□□ -0.96
VPS11-208ENST00000621676 NXPH2O95156 264 aa9.03□□□□□ -0.96
VPS11-208ENST00000621676 GCH1P30793 250 aa9.03□□□□□ -0.96
VPS11-208ENST00000621676 LINC00205P59089 165 aa9.03□□□□□ -0.96
VPS11-208ENST00000621676 MICBQ29980 383 aa9.03□□□□□ -0.96
VPS11-208ENST00000621676 RIPPLY2Q5TAB7 128 aa9.03□□□□□ -0.96
VPS11-208ENST00000621676 RAB12Q6IQ22 244 aa9.03□□□□□ -0.96
VPS11-208ENST00000621676 FDX2Q6P4F2 183 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms